Guide to the Human Genome
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Name: ZNF415 Sequence: fasta or formatted (555aa) NCBI GI: 37655177
Description:

zinc finger protein 415 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [542aa] zinc finger protein 415 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.5         14           1
 C cysteine            6.1         34           1
 D aspartate           3.1         17           2
 E glutamate           6.8         38           2
 F phenylalanine       4.0         22           1
 G glycine             5.6         31           1
 H histidine           6.8         38           1
 I isoleucine          4.3         24           2
 K lysine             10.1         56           3
 L leucine             5.6         31           2
 M methionine          0.5          3           1
 N asparagine          5.2         29           1
 P proline             3.8         21           2
 Q glutamine           4.9         27           2
 R arginine            6.1         34           2
 S serine              8.6         48           2
 T threonine           6.3         35           2
 V valine              5.2         29           1
 W tryptophan          0.7          4           1
 Y tyrosine            3.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 415 isoform 2 
ZNF415                0.924   zinc finger protein 415 isoform 1 
ZNF665                0.586   zinc finger protein 665 
ZNF160                0.578   zinc finger protein 160 
ZNF160                0.578   zinc finger protein 160 
ZNF160                0.578   zinc finger protein 160 
ZNF347                0.577   zinc finger protein 347 
ZNF845                0.566   zinc finger protein 845 
ZNF813                0.560   zinc finger protein 813 
ZNF616                0.548   zinc finger protein 616 
ZNF578                0.536   zinc finger protein 578 
ZNF836                0.535   zinc finger protein 836 
ZNF761                0.531   zinc finger protein 761 
ZNF860                0.526   zinc finger protein 860 
LOC388559             0.526   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.526   PREDICTED: similar to hCG1778601 isoform 1 
LOC388559             0.526   PREDICTED: hypothetical protein LOC388559 
ZNF816A               0.518   zinc finger protein 816A 
ZNF468                0.513   zinc finger protein ZNF468 isoform 2 
ZNF841                0.510   zinc finger protein 841 
ZNF808                0.501   zinc finger protein 808 
ZNF765                0.499   zinc finger protein 765 
ZNF534                0.489   zinc finger protein 534 isoform 1 
ZNF534                0.488   zinc finger protein 534 isoform 2 
ZNF611                0.488   zinc finger protein 611 isoform a 
ZNF611                0.488   zinc finger protein 611 isoform a 
ZNF611                0.488   zinc finger protein 611 isoform a 
ZNF480                0.482   zinc finger protein 480 
LOC400713             0.470   zinc finger protein LOC400713 
ZNF528                0.470   zinc finger protein 528 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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