Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 56550061
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56550061 leukocyte membrane antigen [Homo sapiens]
(299 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56550061 leukocyte membrane antigen [Homo sapiens] 608 e-174
gi|5729776 CD300C antigen [Homo sapiens] 243 2e-64
gi|31324530 CD300e molecule [Homo sapiens] 133 2e-31
gi|38455398 NK inhibitory receptor precursor [Homo sapiens] 119 4e-27
gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens] 114 8e-26
gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens] 114 8e-26
gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens] 114 8e-26
gi|154759271 CD300 molecule-like family member b [Homo sapiens] 107 1e-23
gi|169646348 CD300 molecule-like family member d [Homo sapiens] 96 4e-20
gi|21687218 CD300 molecule-like family member g [Homo sapiens] 80 2e-15
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa... 74 2e-13
gi|31377806 polymeric immunoglobulin receptor precursor [Homo sa... 71 1e-12
gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Hom... 64 2e-10
gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 59 5e-09
gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Hom... 59 5e-09
gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo... 52 5e-07
gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo s... 52 5e-07
gi|9507203 triggering receptor expressed on myeloid cells 2 prec... 50 2e-06
gi|130978672 adenosine A3 receptor isoform 3 [Homo sapiens] 50 3e-06
gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens] 50 3e-06
gi|170932501 triggering receptor expressed on myeloid cells-like... 47 2e-05
gi|37700254 triggering receptor expressed on myeloid cells-like ... 46 3e-05
gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens] 45 1e-04
gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens] 45 1e-04
gi|30794266 triggering receptor expressed on myeloid cells-like ... 43 3e-04
gi|19923195 carcinoembryonic antigen-related cell adhesion molec... 42 5e-04
gi|68161541 carcinoembryonic antigen-related cell adhesion molec... 39 0.004
gi|226529863 T-cell immunoglobulin and mucin domain containing 4... 39 0.006
gi|226498466 T-cell immunoglobulin and mucin domain containing 4... 39 0.006
gi|5031927 skeletal muscle receptor tyrosine kinase [Homo sapiens] 39 0.007
>gi|56550061 leukocyte membrane antigen [Homo sapiens]
Length = 299
Score = 608 bits (1567), Expect = e-174
Identities = 299/299 (100%), Positives = 299/299 (100%)
Query: 1 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK 60
MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK
Sbjct: 1 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK 60
Query: 61 IVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEV 120
IVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEV
Sbjct: 61 IVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEV 120
Query: 121 EVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQLP 180
EVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQLP
Sbjct: 121 EVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQLP 180
Query: 181 LLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQAATQSELHYANLELLMWP 240
LLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQAATQSELHYANLELLMWP
Sbjct: 181 LLLSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQAATQSELHYANLELLMWP 240
Query: 241 LQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIAAQRPREEEPDSDYSVIRKT 299
LQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIAAQRPREEEPDSDYSVIRKT
Sbjct: 241 LQEKPAPPREVEVEYSTVASPREELHYASVVFDSNTNRIAAQRPREEEPDSDYSVIRKT 299
>gi|5729776 CD300C antigen [Homo sapiens]
Length = 224
Score = 243 bits (619), Expect = 2e-64
Identities = 130/198 (65%), Positives = 143/198 (72%), Gaps = 9/198 (4%)
Query: 2 WLPW---ALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLC 58
W W ALLLL VPG F LS TVAGPVGGSLSVQC YEKEHRTLNK+WCRPPQI C
Sbjct: 6 WASWRSSALLLLLVPGYFPLSHPMTVAGPVGGSLSVQCRYEKEHRTLNKFWCRPPQILRC 65
Query: 59 DKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVV 118
DKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDP+V
Sbjct: 66 DKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPIV 125
Query: 119 EVEVSVFPASTSMTPASITAAKTSTITTAFP----PVSSTTLFAVGATHSASIQEETE-- 172
EVEVSVFPA T+ + ++ TS T P P + + H S+
Sbjct: 126 EVEVSVFPAGTTTASSPQSSMGTSGPPTKLPVHTWPSVTRKDSPEPSPHPGSLFSNVRFL 185
Query: 173 EVVNSQLPLLLSLLALLL 190
+V +LPLLLS+L +L
Sbjct: 186 LLVLLELPLLLSMLGAVL 203
>gi|31324530 CD300e molecule [Homo sapiens]
Length = 205
Score = 133 bits (334), Expect = 2e-31
Identities = 85/192 (44%), Positives = 109/192 (56%), Gaps = 9/192 (4%)
Query: 1 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK 60
MWL ALLLL + GC +L+ +V G G SL+V C YE ++ NKYWCR C+
Sbjct: 1 MWLLPALLLLCLSGCLSLTGPGSVTGTAGDSLTVWCQYESMYKGYNKYWCRGQYDTSCES 60
Query: 61 IVETKGSAG-KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRD--FHDPV 117
IVETKG +RNGRVSIRD P L+FTVT++NL E+DAG+YWC + T W+ D DP
Sbjct: 61 IVETKGEEKVERNGRVSIRDHPEALAFTVTMQNLNEDDAGSYWCKIQTVWVLDSWSRDPS 120
Query: 118 VEVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEE---V 174
V V V PA T TP T T I P + + V T ++ + + V
Sbjct: 121 DLVRVYVSPAIT--TPRRTTHPATPPIFLVVNPGRNLSTGEV-LTQNSGFRLSSPHFLLV 177
Query: 175 VNSQLPLLLSLL 186
V +LPLLLS+L
Sbjct: 178 VLLKLPLLLSML 189
>gi|38455398 NK inhibitory receptor precursor [Homo sapiens]
Length = 290
Score = 119 bits (297), Expect = 4e-27
Identities = 104/315 (33%), Positives = 159/315 (50%), Gaps = 56/315 (17%)
Query: 7 LLLLWVPGCFALSKCR---TVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVE 63
LLL W+ G +++ TV G GSL+VQC Y T K+WCR C +V+
Sbjct: 8 LLLFWLSGYSIVTQITGPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVK 67
Query: 64 TKGSAGK-RNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVEV 122
T GS + + RVSI+D+ N +FTVT+E+L + DA TYWCG++ + +D V V+V
Sbjct: 68 TSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIE----KTGNDLGVTVQV 123
Query: 123 SVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQLPLL 182
++ PA +T +TS SS TL + + + ++ LPL+
Sbjct: 124 TI-------DPAPVTQEETS---------SSPTLTGHHLDNRHKLLK-----LSVLLPLI 162
Query: 183 LSLLALLLLLLVGASLLAWRMFQKWIKAGDHSELSQNPKQA--ATQSELHYANLELLMWP 240
+ +LLLLLV ASLLAWRM + KA +P+Q + +L YA+L L +
Sbjct: 163 FT---ILLLLLVAASLLAWRMMKYQQKAA-----GMSPEQVLQPLEGDLCYADLTLQLAG 214
Query: 241 LQEKPAPPR-------EVEVEYSTVAS-PREELHYASVVFDS--------NTNRIAAQRP 284
+ A + +VEVEY T+AS P+E++ YAS+ + N +++ P
Sbjct: 215 TSPQKATTKLSSAQVDQVEVEYVTMASLPKEDISYASLTLGAEDQEPTYCNMGHLSSHLP 274
Query: 285 -REEEPDSDYSVIRK 298
R E ++YS I +
Sbjct: 275 GRGPEEPTEYSTISR 289
>gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 114 bits (286), Expect = 8e-26
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 29/191 (15%)
Query: 10 LWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAG 69
L PGC +S TV G VG SLSVQC YE++++T NKYWCR P + + ++VET GS G
Sbjct: 144 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEG 203
Query: 70 -KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRD-----FHDPVVEVEVS 123
R+ +V I D P +L+FTVTLENLT +DAG Y CG+ T D DP +V+V
Sbjct: 204 VVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVL 263
Query: 124 VFPASTS----MTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQL 179
V AS++ TPAS T + S + P S+T F + + ++
Sbjct: 264 VSSASSTENSVKTPASPT--RPSQCQGSLP---SSTCFLL--------------LPLLKV 304
Query: 180 PLLLSLLALLL 190
PLLLS+L +L
Sbjct: 305 PLLLSILGAIL 315
>gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 259
Score = 114 bits (286), Expect = 8e-26
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 29/191 (15%)
Query: 10 LWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAG 69
L PGC +S TV G VG SLSVQC YE++++T NKYWCR P + + ++VET GS G
Sbjct: 75 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEG 134
Query: 70 -KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRD-----FHDPVVEVEVS 123
R+ +V I D P +L+FTVTLENLT +DAG Y CG+ T D DP +V+V
Sbjct: 135 VVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVL 194
Query: 124 VFPASTS----MTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQL 179
V AS++ TPAS T + S + P S+T F + + ++
Sbjct: 195 VSSASSTENSVKTPASPT--RPSQCQGSLP---SSTCFLL--------------LPLLKV 235
Query: 180 PLLLSLLALLL 190
PLLLS+L +L
Sbjct: 236 PLLLSILGAIL 246
>gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 114 bits (286), Expect = 8e-26
Identities = 79/191 (41%), Positives = 107/191 (56%), Gaps = 29/191 (15%)
Query: 10 LWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAG 69
L PGC +S TV G VG SLSVQC YE++++T NKYWCR P + + ++VET GS G
Sbjct: 144 LCFPGCLTVSGPSTVMGAVGESLSVQCRYEEKYKTFNKYWCRQPCLPIWHEMVETGGSEG 203
Query: 70 -KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRD-----FHDPVVEVEVS 123
R+ +V I D P +L+FTVTLENLT +DAG Y CG+ T D DP +V+V
Sbjct: 204 VVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQVQVL 263
Query: 124 VFPASTS----MTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNSQL 179
V AS++ TPAS T + S + P S+T F + + ++
Sbjct: 264 VSSASSTENSVKTPASPT--RPSQCQGSLP---SSTCFLL--------------LPLLKV 304
Query: 180 PLLLSLLALLL 190
PLLLS+L +L
Sbjct: 305 PLLLSILGAIL 315
>gi|154759271 CD300 molecule-like family member b [Homo sapiens]
Length = 238
Score = 107 bits (267), Expect = 1e-23
Identities = 58/136 (42%), Positives = 84/136 (61%), Gaps = 5/136 (3%)
Query: 1 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK 60
MWLP ALLLL + GCF++ +V P GSL+VQC Y++ T K+WCR + C
Sbjct: 38 MWLPPALLLLSLSGCFSIQGPESVRAPEQGSLTVQCHYKQGWETYIKWWCRGVRWDTCKI 97
Query: 61 IVETKGS-AGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVE 119
++ET+GS G+++ RVSI+D+ + +FTVT+E L +DA YWCG++ R D +
Sbjct: 98 LIETRGSEQGEKSDRVSIKDNQKDRTFTVTMEGLRRDDADVYWCGIE----RRGPDLGTQ 153
Query: 120 VEVSVFPASTSMTPAS 135
V+V V P + T AS
Sbjct: 154 VKVIVDPEGAASTTAS 169
>gi|169646348 CD300 molecule-like family member d [Homo sapiens]
Length = 194
Score = 95.9 bits (237), Expect = 4e-20
Identities = 70/194 (36%), Positives = 103/194 (53%), Gaps = 13/194 (6%)
Query: 1 MWLPWALLLLWVPGCFALSKCR---TVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFL 57
MWL +LLLL +PG +K TV G GSL+VQC Y T K+ C+
Sbjct: 1 MWLSPSLLLLILPGYSIAAKITGPTTVNGSEQGSLTVQCAYGSGWETYLKWRCQGADWNY 60
Query: 58 CDKIVETKGSAGK-RNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDP 116
C+ +V+T GS + + RVSIRD+ N FTVT+ENL +DA +YWCG + P + D
Sbjct: 61 CNILVKTNGSEQEVKKNRVSIRDNQKNHVFTVTMENLKRDDADSYWCGTERPGI----DL 116
Query: 117 VVEVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVN 176
V+V+V++ P T +++ T+T + AF ++T + T S +
Sbjct: 117 GVKVQVTINPG----TQTAVSEWTTTTASLAF-TAAATQKTSSPLTRSPLKSTHFLFLFL 171
Query: 177 SQLPLLLSLLALLL 190
+LPLLLS+L +L
Sbjct: 172 LELPLLLSMLGTVL 185
>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
Length = 332
Score = 80.5 bits (197), Expect = 2e-15
Identities = 62/173 (35%), Positives = 84/173 (48%), Gaps = 22/173 (12%)
Query: 7 LLLLW----VPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFL--CDK 60
L+LLW +PG AL ++G G ++S+QC Y +E R KYWCR I C
Sbjct: 4 LVLLWGCLLLPGYEALEGPEEISGFEGDTVSLQCTYREELRDHRKYWCRKGGILFSRCSG 63
Query: 61 IV--ETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVV 118
+ E +G + GRVSIRDS LS VTL NLT +DAG YWCGV+ + D +
Sbjct: 64 TIYAEEEGQETMK-GRVSIRDSRQELSLIVTLWNLTLQDAGEYWCGVE----KRGPDESL 118
Query: 119 EVEVSVFPA-------STSMTPASIT--AAKTSTITTAFPPVSSTTLFAVGAT 162
+ + VFP S + P + T K T P ++S L+ T
Sbjct: 119 LISLFVFPGPCCPPSPSPTFQPLATTRLQPKAKAQQTQPPGLTSPGLYPAATT 171
>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
Length = 276
Score = 73.9 bits (180), Expect = 2e-13
Identities = 82/268 (30%), Positives = 113/268 (42%), Gaps = 24/268 (8%)
Query: 4 PWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKY-WCRPPQIFLCDKIV 62
P LLLL PG A SK + + G +L+V+C Y K WC+ +C ++V
Sbjct: 8 PLLLLLLLFPGSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLV 67
Query: 63 -ETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVE 121
+K R +I D P FTVT+ +L EED+G YWC + P + V
Sbjct: 68 TSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRP-SDNSVSKSVRFY 126
Query: 122 VSVFPAS----TSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEEVVNS 177
+ V PAS TS TP + +++T T + PP T A A S S + NS
Sbjct: 127 LVVSPASASTQTSWTPRDLVSSQTQT-QSCVPP----TAGARQAPESPSTIPVPSQPQNS 181
Query: 178 QL----PLLLSLLALLLLLLVGASLLAWRMFQKW--IKAGDHSELSQNPKQAATQSELHY 231
L ++L+ + LLV SL+ + W I EL Q AT H
Sbjct: 182 TLRPGPAAPIALVPVFCGLLVAKSLVLSALLVWWGDIWWKTMMELRSLDTQKAT---CHL 238
Query: 232 ANLELLMWPLQEKPAPPREVEVEYSTVA 259
+ L W P E E+ Y TVA
Sbjct: 239 QQVTDLPWTSVSSPV---EREILYHTVA 263
>gi|31377806 polymeric immunoglobulin receptor precursor [Homo
sapiens]
Length = 764
Score = 71.2 bits (173), Expect = 1e-12
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 24 VAGPVGGSLSVQCPYEKEHRTLNKYWC--RPPQIFLCDKIVETKGSA-GKRNGRVSIRDS 80
V G GGS++V CPY ++ KYWC Q C +V+++G + GR+S+ +
Sbjct: 359 VKGVAGGSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEE 418
Query: 81 PANLSFTVTLENLTEEDAGTYWC--GVDTPWLRDFHDPVVEVEVSVFPASTSMTPASITA 138
P N +FTV L LT DAG YWC DT W ++E E ++ P ++TA
Sbjct: 419 PGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEIKIIEGEPNL------KVPGNVTA 472
Query: 139 AKTSTI 144
T+
Sbjct: 473 VLGETL 478
Score = 52.0 bits (123), Expect = 6e-07
Identities = 45/156 (28%), Positives = 72/156 (46%), Gaps = 17/156 (10%)
Query: 8 LLLWVPGCF-----ALSKCRTVAGPV------GGSLSVQCPYEKE--HRTLNKYWCRPPQ 54
+LL+V C A+S + GP G S+S+ C Y +R KYWCR
Sbjct: 1 MLLFVLTCLLAVFPAISTKSPIFGPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGA 60
Query: 55 IFLCDKIVETKGS-AGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDF 113
C ++ ++G + K GR ++ + P N +F V + L+++D+G Y CG+
Sbjct: 61 RGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDDSGRYKCGLGINSRGLS 120
Query: 114 HDPVVEVEVSVFPASTSMTPA-SITAAKTSTITTAF 148
D V +EVS P + T ++ +T TI F
Sbjct: 121 FD--VSLEVSQGPGLLNDTKVYTVDLGRTVTINCPF 154
Score = 47.0 bits (110), Expect = 2e-05
Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 30 GSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGS-AGKRNGRVSIRDSPANLSFTV 88
GS++ C E + K+ CR CD +V T G A GR+ + + SF+V
Sbjct: 251 GSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSV 310
Query: 89 TLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVEVSVFPASTSMTPASITAAK 140
+ L +EDAG Y CG + P+ ++ V ST P S T K
Sbjct: 311 VITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEEST--IPRSPTVVK 360
Score = 35.0 bits (79), Expect = 0.080
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 5/82 (6%)
Query: 24 VAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPAN 83
V +G +L V C + + + KYWC+ C + G V+ ++
Sbjct: 470 VTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTG-CQALPSQ--DEGPSKAFVNCDENSRL 526
Query: 84 LSFTVTLENLTEEDAGTYWCGV 105
+S T+ L +T D G YWCGV
Sbjct: 527 VSLTLNL--VTRADEGWYWCGV 546
Score = 28.5 bits (62), Expect = 7.5
Identities = 22/93 (23%), Positives = 42/93 (45%), Gaps = 5/93 (5%)
Query: 13 PGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKR- 71
PG +K TV +G ++++ CP++ E+ K + ++ ++++ G
Sbjct: 131 PGLLNDTKVYTV--DLGRTVTINCPFKTENAQKRKSLYKQIGLYPV-LVIDSSGYVNPNY 187
Query: 72 NGRVSIR-DSPANLSFTVTLENLTEEDAGTYWC 103
GR+ + L F+V + L DAG Y C
Sbjct: 188 TGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLC 220
>gi|172072602 Fc receptor, IgA, IgM, high affinity isoform 2 [Homo
sapiens]
Length = 552
Score = 63.5 bits (153), Expect = 2e-10
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 22/149 (14%)
Query: 17 ALSKCRTVAGPVGGSLSVQCPYEKE--HRTLNKYWCR--PPQIFLCDKIVETKGSAGKR- 71
+L R V+G GG++++QC Y +R KYWCR PP+ ++C IV T R
Sbjct: 83 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPR-WICQTIVSTNQYTHHRY 141
Query: 72 NGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVEVSVFPASTSM 131
RV++ D P F V L L+ +D G Y CG+ + E ++ S ++
Sbjct: 142 RDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGS-------------ENNMLFLSMNL 188
Query: 132 TPASITAAKTSTITTAFPPVSSTTLFAVG 160
T I+A ST+ TA P T+ + G
Sbjct: 189 T---ISAGPASTLPTATPAAGELTMRSYG 214
>gi|172072600 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 58.9 bits (141), Expect = 5e-09
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 17 ALSKCRTVAGPVGGSLSVQCPYEKE--HRTLNKYWCR--PPQIFLCDKIVETKGSAGKR- 71
+L R V+G GG++++QC Y +R KYWCR PP+ ++C IV T R
Sbjct: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPR-WICQTIVSTNQYTHHRY 166
Query: 72 NGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGV 105
RV++ D P F V L L+ +D G Y CG+
Sbjct: 167 RDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
>gi|117320515 Fc receptor, IgA, IgM, high affinity isoform 1 [Homo
sapiens]
Length = 265
Score = 58.9 bits (141), Expect = 5e-09
Identities = 35/94 (37%), Positives = 50/94 (53%), Gaps = 6/94 (6%)
Query: 17 ALSKCRTVAGPVGGSLSVQCPYEKE--HRTLNKYWCR--PPQIFLCDKIVETKGSAGKR- 71
+L R V+G GG++++QC Y +R KYWCR PP+ ++C IV T R
Sbjct: 108 SLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRKYWCRLGPPR-WICQTIVSTNQYTHHRY 166
Query: 72 NGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGV 105
RV++ D P F V L L+ +D G Y CG+
Sbjct: 167 RDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGI 200
>gi|216547575 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 52.4 bits (124), Expect = 5e-07
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 2 WLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQ-IFLCDK 60
WL W L L V G + V G +GGS++++CP + H + Y CR C
Sbjct: 4 WL-WPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRI--YLCREMAGSGTCGT 60
Query: 61 IVETKGSA-GKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCG 104
+V T + GRV+++ P F V + LTE D+G Y CG
Sbjct: 61 VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACG 105
>gi|4885641 Fas apoptotic inhibitory molecule 3 isoform a [Homo
sapiens]
Length = 390
Score = 52.4 bits (124), Expect = 5e-07
Identities = 35/105 (33%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 2 WLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQ-IFLCDK 60
WL W L L V G + V G +GGS++++CP + H + Y CR C
Sbjct: 4 WL-WPLYFLPVSGALRILPEVKVEGELGGSVTIKCPLPEMHVRI--YLCREMAGSGTCGT 60
Query: 61 IVETKGSA-GKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCG 104
+V T + GRV+++ P F V + LTE D+G Y CG
Sbjct: 61 VVSTTNFIKAEYKGRVTLKQYPRKNLFLVEVTQLTESDSGVYACG 105
>gi|9507203 triggering receptor expressed on myeloid cells 2
precursor [Homo sapiens]
Length = 230
Score = 50.1 bits (118), Expect = 2e-06
Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 7/104 (6%)
Query: 7 LLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEK-EHRTLNKYWCRP-PQIFLCDKIVET 64
L+LL+V G G SL V CPY+ +H K WCR + C ++V T
Sbjct: 7 LILLFVTELSGAHNTTVFQGVAGQSLQVSCPYDSMKHWGRRKAWCRQLGEKGPCQRVVST 66
Query: 65 KGS-----AGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWC 103
+ NG +I D + T+TL NL DAG Y C
Sbjct: 67 HNLWLLSFLRRWNGSTAITDDTLGGTLTITLRNLQPHDAGLYQC 110
>gi|130978672 adenosine A3 receptor isoform 3 [Homo sapiens]
Length = 266
Score = 49.7 bits (117), Expect = 3e-06
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 1 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK 60
MWL L L + + + + V + S C Y ++ KYWCR C+
Sbjct: 59 MWLFILLSLALISDAMVMDE-KVKRSFVLDTASAICNYNAHYKNHPKYWCRGYFRDYCNI 117
Query: 61 IVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHD 115
I + S V++RD+ L VT+ LT+ED G YWCG+ + RD D
Sbjct: 118 IAFSPNSTN----HVALRDTGNQL--IVTMSCLTKEDTGWYWCGIQRDFARDDMD 166
>gi|46559769 adenosine A3 receptor isoform 1 [Homo sapiens]
Length = 347
Score = 49.7 bits (117), Expect = 3e-06
Identities = 35/115 (30%), Positives = 51/115 (44%), Gaps = 7/115 (6%)
Query: 1 MWLPWALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDK 60
MWL L L + + + + V + S C Y ++ KYWCR C+
Sbjct: 140 MWLFILLSLALISDAMVMDE-KVKRSFVLDTASAICNYNAHYKNHPKYWCRGYFRDYCNI 198
Query: 61 IVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHD 115
I + S V++RD+ L VT+ LT+ED G YWCG+ + RD D
Sbjct: 199 IAFSPNSTN----HVALRDTGNQL--IVTMSCLTKEDTGWYWCGIQRDFARDDMD 247
>gi|170932501 triggering receptor expressed on myeloid cells-like 2
[Homo sapiens]
Length = 321
Score = 47.0 bits (110), Expect = 2e-05
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 7 LLLLWVPGCFALSKCRTVAGPV----GGSLSVQCPYEK-EHRTLNKYWCRPPQIFLCDKI 61
LLLLW GC + +V V G +LSVQC Y+ ++R K WC KI
Sbjct: 8 LLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWC---------KI 58
Query: 62 VETKGSAG-----KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDP 116
+ K G + R ++D +T+ L +D+G YWC +T + P
Sbjct: 59 RKKKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGIL---YP 115
Query: 117 VVEVEVSVFPASTSMTPASIT----AAKTSTITTAFPPVS 152
++ ++ V PA + T K+ T+TT P S
Sbjct: 116 LMGFQLDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTS 155
>gi|37700254 triggering receptor expressed on myeloid cells-like 4
[Homo sapiens]
Length = 200
Score = 46.2 bits (108), Expect = 3e-05
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 3/127 (2%)
Query: 29 GGSLSVQCPYEKEHRTLN-KYWCRPPQIFLCDKIV-ETKGSAGKRNGRVSIRDSPANLSF 86
G +L +QC Y + K WC+ C +V +K + +I D P F
Sbjct: 33 GQTLLLQCQYSPKRGPYQPKSWCQQTSPSRCTLLVTSSKPWTAVQKSHYTIWDKPNAGFF 92
Query: 87 TVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVEVSVFPASTSMTPASITAAKTSTITT 146
+T+ LT+ D+G YWCG+ + + + + V PA T+ ++ TST+
Sbjct: 93 NITMIQLTQNDSGFYWCGIYNA-SENIITVLRNISLVVSPAPTTSPMWTLPWLPTSTVLI 151
Query: 147 AFPPVSS 153
P +S
Sbjct: 152 TSPEGTS 158
>gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 44.7 bits (104), Expect = 1e-04
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 24 VAGPVGGSLSVQCPYEKEHRTL--NKYWCRPPQIFLCDK-IVETKGS--AGKRNGRVSIR 78
V G G S+++ C Y ++ N+ C +F C IV T G+ +++ R +
Sbjct: 24 VGGEAGPSVTLPCHYSGAVTSMCWNRGSC---SLFTCQNGIVWTNGTHVTYRKDTRYKLL 80
Query: 79 DSPANLSFTVTLENLTEEDAGTYWCGVD-TPWLRDFHDPVVEVEVSVFPASTSMTPASIT 137
+ ++T+EN D+G Y C V+ W F+D + V + + P + TP T
Sbjct: 81 GDLSRRDVSLTIENTAVSDSGVYCCRVEHRGW---FNDMKITVSLEIVPPKVTTTPIVTT 137
Query: 138 AAKTSTITTAFPPVSSTTL 156
+T+ T+ ++TT+
Sbjct: 138 VPTVTTVRTSTTVPTTTTV 156
>gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 44.7 bits (104), Expect = 1e-04
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 24 VAGPVGGSLSVQCPYEKEHRTL--NKYWCRPPQIFLCDK-IVETKGS--AGKRNGRVSIR 78
V G G S+++ C Y ++ N+ C +F C IV T G+ +++ R +
Sbjct: 24 VGGEAGPSVTLPCHYSGAVTSMCWNRGSC---SLFTCQNGIVWTNGTHVTYRKDTRYKLL 80
Query: 79 DSPANLSFTVTLENLTEEDAGTYWCGVD-TPWLRDFHDPVVEVEVSVFPASTSMTPASIT 137
+ ++T+EN D+G Y C V+ W F+D + V + + P + TP T
Sbjct: 81 GDLSRRDVSLTIENTAVSDSGVYCCRVEHRGW---FNDMKITVSLEIVPPKVTTTPIVTT 137
Query: 138 AAKTSTITTAFPPVSSTTL 156
+T+ T+ ++TT+
Sbjct: 138 VPTVTTVRTSTTVPTTTTV 156
>gi|30794266 triggering receptor expressed on myeloid cells-like 1
[Homo sapiens]
Length = 311
Score = 43.1 bits (100), Expect = 3e-04
Identities = 35/104 (33%), Positives = 43/104 (41%), Gaps = 8/104 (7%)
Query: 7 LLLLWVPGCFALSKCRTVA-GPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFL---CDKIV 62
LLLL + G + V PVG S+ VQC Y + K WCR FL C +V
Sbjct: 8 LLLLGLEGQGIVGSLPEVLQAPVGSSILVQCHYRLQDVKAQKVWCR----FLPEGCQPLV 63
Query: 63 ETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVD 106
+ GR + V + L EEDAG Y C VD
Sbjct: 64 SSAVDRRAPAGRRTFLTDLGGGLLQVEMVTLQEEDAGEYGCMVD 107
>gi|19923195 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 1 precursor [Homo sapiens]
Length = 526
Score = 42.4 bits (98), Expect = 5e-04
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Query: 87 TVTLENLTEEDAGTYWCGVDTPWLRDFHDPV-VEVEVSVFPASTSMTPASITAAKTSTIT 145
T+++ + EDAGTYWC V P ++ DP+ + V + P ++P +I +
Sbjct: 380 TLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLSPGAIAGIVIGVVA 439
Query: 146 -TAFPPVSSTTLFAVGATHSASIQEETEE 173
A V+ G T AS Q + E
Sbjct: 440 LVALIAVALACFLHFGKTGRASDQRDLTE 468
Score = 31.2 bits (69), Expect = 1.2
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 75 VSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVEVSVFPASTSMTPA 134
VS R +N + T+TL ++T D G Y C + P + DPV + V+ P + +++P+
Sbjct: 187 VSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVT-LNVTYGPDTPTISPS 245
>gi|68161541 carcinoembryonic antigen-related cell adhesion molecule
1 isoform 2 precursor [Homo sapiens]
Length = 464
Score = 39.3 bits (90), Expect = 0.004
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 87 TVTLENLTEEDAGTYWCGVDTPWLRDFHDPV-VEVEVSVFPASTSMTPASI 136
T+++ + EDAGTYWC V P ++ DP+ + V + P ++P +I
Sbjct: 380 TLSINPVKREDAGTYWCEVFNPISKNQSDPIMLNVNYNALPQENGLSPGAI 430
Score = 31.2 bits (69), Expect = 1.2
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 75 VSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVEVSVFPASTSMTPA 134
VS R +N + T+TL ++T D G Y C + P + DPV + V+ P + +++P+
Sbjct: 187 VSPRLQLSNGNRTLTLLSVTRNDTGPYECEIQNPVSANRSDPVT-LNVTYGPDTPTISPS 245
>gi|226529863 T-cell immunoglobulin and mucin domain containing 4
isoform 1 [Homo sapiens]
Length = 378
Score = 38.9 bits (89), Expect = 0.006
Identities = 31/157 (19%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 5 WALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEK-EHRTLNKYWCRP--PQIFLCDKI 61
W ++ W ++ V +G +++ C Y H + + W + P + +
Sbjct: 9 WLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCPYSGCKEAL 68
Query: 62 VETKGS--AGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTP-WLRDFHDPVV 118
+ T G +++ + ++ + ++T+ N +E D+G Y C ++ P W F+D +
Sbjct: 69 IRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGW---FNDVKI 125
Query: 119 EVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTT 155
V +++ AST+ + T + +T T+ TT
Sbjct: 126 NVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTT 162
>gi|226498466 T-cell immunoglobulin and mucin domain containing 4
isoform 2 [Homo sapiens]
Length = 350
Score = 38.9 bits (89), Expect = 0.006
Identities = 31/157 (19%), Positives = 69/157 (43%), Gaps = 9/157 (5%)
Query: 5 WALLLLWVPGCFALSKCRTVAGPVGGSLSVQCPYEK-EHRTLNKYWCRP--PQIFLCDKI 61
W ++ W ++ V +G +++ C Y H + + W + P + +
Sbjct: 9 WLMIEFWWLYLTPVTSETVVTEVLGHRVTLPCLYSSWSHNSNSMCWGKDQCPYSGCKEAL 68
Query: 62 VETKGS--AGKRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTP-WLRDFHDPVV 118
+ T G +++ + ++ + ++T+ N +E D+G Y C ++ P W F+D +
Sbjct: 69 IRTDGMRVTSRKSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGW---FNDVKI 125
Query: 119 EVEVSVFPASTSMTPASITAAKTSTITTAFPPVSSTT 155
V +++ AST+ + T + +T T+ TT
Sbjct: 126 NVRLNLQRASTTTHRTATTTTRRTTTTSPTTTRQMTT 162
>gi|5031927 skeletal muscle receptor tyrosine kinase [Homo sapiens]
Length = 869
Score = 38.5 bits (88), Expect = 0.007
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 70 KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDPVVEVEVSVF---- 125
+ N R+++ +S + + + N+ +EDAG Y C V L + VV++EV VF
Sbjct: 162 RENSRIAVLESGS-----LRIHNVQKEDAGQYRC-VAKNSLGTAYSKVVKLEVEVFARIL 215
Query: 126 --PASTSMTPASITAAKTSTITTAFPPVSSTTLFAVGATHSASIQEETEE-VVNSQLPLL 182
P S ++T S + T P + T + A S SIQE ++ V++S+L L
Sbjct: 216 RAPESHNVTFGSFVTLHCT--ATGIPVPTITWIENGNAVSSGSIQESVKDRVIDSRLQLF 273
Query: 183 LS 184
++
Sbjct: 274 IT 275
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.130 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,069,195
Number of Sequences: 37866
Number of extensions: 520369
Number of successful extensions: 2782
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 94
Number of HSP's that attempted gapping in prelim test: 2403
Number of HSP's gapped (non-prelim): 486
length of query: 299
length of database: 18,247,518
effective HSP length: 102
effective length of query: 197
effective length of database: 14,385,186
effective search space: 2833881642
effective search space used: 2833881642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.