TRAF3IP3 3391

Name: TRAF3IP3	Sequence: fasta or formatted (531aa)		NCBI GI: 13435127
Description: TRAF3-interacting JNK-activating modulator		Referenced in: TNF and Related Signals
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 29 3 C cysteine 2.3 12 1 D aspartate 4.9 26 1 E glutamate 9.2 49 2 F phenylalanine 1.1 6 2 G glycine 4.1 22 2 H histidine 1.9 10 2 I isoleucine 2.4 13 2 K lysine 8.1 43 2 L leucine 13.7 73 2 M methionine 1.5 8 1 N asparagine 3.0 16 1 P proline 4.9 26 3 Q glutamine 12.4 66 2 R arginine 7.3 39 3 S serine 6.8 36 2 T threonine 4.1 22 2 V valine 3.6 19 2 W tryptophan 1.5 8 1 Y tyrosine 1.5 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 TRAF3-interacting JNK-activating modulator SLMAP 0.123 sarcolemma associated protein LOC400352 0.046 PREDICTED: similar to Putative golgin subfamily A m... LOC100132816 0.044 PREDICTED: similar to Putative golgin subfamily A m... CLIP1 0.042 restin isoform b CLIP1 0.042 restin isoform a CCDC88B 0.042 coiled-coil domain containing 88 EEA1 0.040 early endosome antigen 1, 162kD TMF1 0.040 TATA element modulatory factor 1 LOC283685 0.039 PREDICTED: golgi autoantigen, golgin subfamily a-li... PMFBP1 0.039 polyamine modulated factor 1 binding protein 1 isof... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.039 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CCDC18 0.039 sarcoma antigen NY-SAR-41 MYH10 0.038 myosin, heavy polypeptide 10, non-muscle FAM184A 0.038 hypothetical protein LOC79632 isoform 2 FAM184A 0.038 hypothetical protein LOC79632 isoform 1 KIF20B 0.038 M-phase phosphoprotein 1 GCC2 0.037 GRIP and coiled-coil domain-containing 2 CROCC 0.036 ciliary rootlet coiled-coil GOLGA1 0.036 golgin 97 MYH14 0.035 myosin, heavy chain 14 isoform 1 MYH14 0.035 myosin, heavy chain 14 isoform 2 MYH14 0.035 myosin, heavy chain 14 isoform 3 C6orf204 0.035 chromosome 6 open reading frame 204 isoform a [Homo... CIT 0.035 citron MYH6 0.034 myosin heavy chain 6 CEP250 0.034 centrosomal protein 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.