CTDSPL 33105

Name: CTDSPL	Sequence: fasta or formatted (276aa)		NCBI GI: 56549683
Description: small CTD phosphatase 3 isoform 1		Referenced in: RNA Polymerase and General Transcription Factors
Other entries for this name: alt prot [265aa] small CTD phosphatase 3 isoform 2
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.7 13 1 C cysteine 2.5 7 2 D aspartate 7.6 21 2 E glutamate 6.2 17 2 F phenylalanine 5.4 15 2 G glycine 5.1 14 2 H histidine 2.2 6 1 I isoleucine 5.1 14 2 K lysine 4.7 13 2 L leucine 10.1 28 2 M methionine 1.4 4 1 N asparagine 3.3 9 1 P proline 8.0 22 3 Q glutamine 3.6 10 1 R arginine 6.2 17 1 S serine 8.0 22 2 T threonine 2.9 8 1 V valine 9.4 26 2 W tryptophan 0.7 2 1 Y tyrosine 2.9 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 small CTD phosphatase 3 isoform 1 CTDSPL 0.944 small CTD phosphatase 3 isoform 2 CTDSP1 0.610 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDSP1 0.609 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDSP2 0.551 nuclear LIM interactor-interacting factor 2 CTDSPL2 0.243 CTD (carboxy-terminal domain, RNA polymerase II, po... DULLARD 0.228 dullard homolog DULLARD 0.228 dullard homolog TIMM50 0.102 translocase of inner mitochondrial membrane 50 homol... CTDP1 0.037 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDP1 0.037 CTD (carboxy-terminal domain, RNA polymerase II, pol... FBN1 0.017 fibrillin 1 precursor FLJ10357 0.009 hypothetical protein LOC55701 RICH2 0.009 Rho GTPase-activating protein RICH2 NRG1 0.007 neuregulin 1 isoform SMDF RYR1 0.007 skeletal muscle ryanodine receptor isoform 2 RYR1 0.007 skeletal muscle ryanodine receptor isoform 1 LOC100132247 0.006 hypothetical protein LOC100132247 LOC728888 0.006 PREDICTED: similar to acyl-CoA synthetase medium-ch... ABCB11 0.006 ATP-binding cassette, sub-family B (MDR/TAP), member... NPIPL3 0.006 nuclear pore complex interacting protein-like 3 [Ho... ATN1 0.006 atrophin-1 ATN1 0.006 atrophin-1 FAF2 0.006 UBX domain containing 8 SH3PXD2B 0.006 SH3 and PX domains 2B ITM2B 0.006 integral membrane protein 2B SF1 0.006 splicing factor 1 isoform 3 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.