CTDSP2 37365

Name: CTDSP2	Sequence: fasta or formatted (271aa)		NCBI GI: 93004102
Description: nuclear LIM interactor-interacting factor 2		Referenced in: LIM Domain Proteins RNA Polymerase and General Transcription Factors
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.6 18 2 C cysteine 3.3 9 2 D aspartate 6.3 17 2 E glutamate 7.4 20 2 F phenylalanine 5.5 15 1 G glycine 4.8 13 1 H histidine 2.2 6 1 I isoleucine 5.5 15 2 K lysine 4.4 12 2 L leucine 11.4 31 2 M methionine 1.1 3 1 N asparagine 2.6 7 2 P proline 4.8 13 1 Q glutamine 4.8 13 1 R arginine 6.3 17 2 S serine 7.0 19 4 T threonine 5.2 14 2 V valine 7.0 19 2 W tryptophan 0.4 1 1 Y tyrosine 3.3 9 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nuclear LIM interactor-interacting factor 2 CTDSPL 0.569 small CTD phosphatase 3 isoform 1 CTDSPL 0.557 small CTD phosphatase 3 isoform 2 CTDSP1 0.556 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDSP1 0.552 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDSPL2 0.241 CTD (carboxy-terminal domain, RNA polymerase II, po... DULLARD 0.213 dullard homolog DULLARD 0.213 dullard homolog TIMM50 0.096 translocase of inner mitochondrial membrane 50 homol... CTDP1 0.023 CTD (carboxy-terminal domain, RNA polymerase II, pol... CTDP1 0.023 CTD (carboxy-terminal domain, RNA polymerase II, pol... UBLCP1 0.011 ubiquitin-like domain containing CTD phosphatase 1 ... FAF2 0.010 UBX domain containing 8 FLJ37396 0.010 PREDICTED: hypothetical protein LOC285754 FLJ37396 0.008 PREDICTED: hypothetical protein LOC285754 FLJ37396 0.008 PREDICTED: hypothetical protein LOC285754 ACTL6A 0.008 actin-like 6A isoform 2 ACTL6A 0.008 actin-like 6A isoform 2 ACTL6A 0.008 actin-like 6A isoform 1 CAMSAP1 0.006 calmodulin regulated spectrin-associated protein 1 ... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.