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Search of human proteins with 56117852
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56117852 upstream of NRAS isoform 1 [Homo sapiens]
(798 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56117852 upstream of NRAS isoform 1 [Homo sapiens] 1606 0.0
gi|194473720 upstream of NRAS isoform 3 [Homo sapiens] 1524 0.0
gi|56117850 upstream of NRAS isoform 2 [Homo sapiens] 1524 0.0
gi|109715854 calcium-regulated heat-stable protein 1 [Homo sapiens] 34 0.61
gi|109715858 calcium-regulated heat-stable protein 1 [Homo sapiens] 34 0.61
gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens] 33 1.0
gi|162417982 zinc finger protein 64 isoform d [Homo sapiens] 32 1.8
gi|40806227 zinc finger protein 64 isoform c [Homo sapiens] 32 1.8
gi|40806223 zinc finger protein 64 isoform a [Homo sapiens] 32 1.8
gi|156415990 Y box binding protein 2 [Homo sapiens] 31 4.0
gi|120953300 leucine-rich repeats and IQ motif containing 1 isof... 31 5.2
gi|120953243 leucine-rich repeats and IQ motif containing 1 isof... 31 5.2
gi|110349721 titin isoform novex-3 [Homo sapiens] 30 6.8
gi|34098946 nuclease sensitive element binding protein 1 [Homo s... 30 6.8
gi|224586884 cold shock domain protein A isoform b [Homo sapiens] 30 6.8
gi|224586882 cold shock domain protein A isoform a [Homo sapiens] 30 6.8
gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo ... 30 6.8
gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo ... 30 6.8
gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens] 30 8.8
gi|85797660 limkain b1 [Homo sapiens] 30 8.8
>gi|56117852 upstream of NRAS isoform 1 [Homo sapiens]
Length = 798
Score = 1606 bits (4158), Expect = 0.0
Identities = 798/798 (100%), Positives = 798/798 (100%)
Query: 1 MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 60
MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL
Sbjct: 1 MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 60
Query: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKSPAAP 120
QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKSPAAP
Sbjct: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKSPAAP 120
Query: 121 GQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK 180
GQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK
Sbjct: 121 GQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK 180
Query: 181 KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE 240
KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE
Sbjct: 181 KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE 240
Query: 241 VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG 300
VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG
Sbjct: 241 VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG 300
Query: 301 DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF 360
DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF
Sbjct: 301 DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF 360
Query: 361 GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF 420
GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF
Sbjct: 361 GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF 420
Query: 421 HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS 480
HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS
Sbjct: 421 HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS 480
Query: 481 TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK 540
TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK
Sbjct: 481 TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK 540
Query: 541 EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK 600
EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK
Sbjct: 541 EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK 600
Query: 601 VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG 660
VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG
Sbjct: 601 VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG 660
Query: 661 QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS 720
QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS
Sbjct: 661 QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS 720
Query: 721 VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD 780
VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD
Sbjct: 721 VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD 780
Query: 781 NSMGFGAERKIRQAGVID 798
NSMGFGAERKIRQAGVID
Sbjct: 781 NSMGFGAERKIRQAGVID 798
>gi|194473720 upstream of NRAS isoform 3 [Homo sapiens]
Length = 813
Score = 1524 bits (3947), Expect = 0.0
Identities = 767/798 (96%), Positives = 767/798 (96%), Gaps = 31/798 (3%)
Query: 1 MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 60
MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL
Sbjct: 47 MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 106
Query: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKSPAAP 120
QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQ
Sbjct: 107 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQ----------------- 149
Query: 121 GQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK 180
EVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK
Sbjct: 150 --------------EVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK 195
Query: 181 KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE 240
KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE
Sbjct: 196 KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE 255
Query: 241 VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG 300
VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG
Sbjct: 256 VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG 315
Query: 301 DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF 360
DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF
Sbjct: 316 DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF 375
Query: 361 GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF 420
GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF
Sbjct: 376 GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF 435
Query: 421 HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS 480
HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS
Sbjct: 436 HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS 495
Query: 481 TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK 540
TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK
Sbjct: 496 TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK 555
Query: 541 EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK 600
EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK
Sbjct: 556 EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK 615
Query: 601 VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG 660
VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG
Sbjct: 616 VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG 675
Query: 661 QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS 720
QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS
Sbjct: 676 QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS 735
Query: 721 VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD 780
VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD
Sbjct: 736 VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD 795
Query: 781 NSMGFGAERKIRQAGVID 798
NSMGFGAERKIRQAGVID
Sbjct: 796 NSMGFGAERKIRQAGVID 813
>gi|56117850 upstream of NRAS isoform 2 [Homo sapiens]
Length = 767
Score = 1524 bits (3947), Expect = 0.0
Identities = 767/798 (96%), Positives = 767/798 (96%), Gaps = 31/798 (3%)
Query: 1 MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 60
MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL
Sbjct: 1 MSFDPNLLHNNGHNGYPNGTSAALRETGVIEKLLTSYGFIQCSERQARLFFHCSQYNGNL 60
Query: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKSPAAP 120
QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQ
Sbjct: 61 QDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQ----------------- 103
Query: 121 GQSPTGSVCYERNGEVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK 180
EVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK
Sbjct: 104 --------------EVFYLTYTPEDVEGNVQLETGDKINFVIDNNKHTGAVSARNIMLLK 149
Query: 181 KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE 240
KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE
Sbjct: 150 KKQARCQGVVCAMKEAFGFIERGDVVKEIFFHYSEFKGDLETLQPGDDVEFTIKDRNGKE 209
Query: 241 VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG 300
VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG
Sbjct: 210 VATDVRLLPQGTVIFEDISIEHFEGTVTKVIPKVPSKNQNDPLPGRIKVDFVIPKELPFG 269
Query: 301 DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF 360
DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF
Sbjct: 270 DKDTKSKVTLLEGDHVRFNISTDRRDKLERATNIEVLSNTFQFTNEAREMGVIAAMRDGF 329
Query: 361 GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF 420
GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF
Sbjct: 330 GFIKCVDRDVRMFFHFSEILDGNQLHIADEVEFTVVPDMLSAQRNHAIRIKKLPKGTVSF 389
Query: 421 HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS 480
HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS
Sbjct: 390 HSHSDHRFLGTVEKEATFSNPKTTSPNKGKEKEAEDGIIAYDDCGVKLTIAFQAKDVEGS 449
Query: 481 TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK 540
TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK
Sbjct: 450 TSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATLKDNFGFIETANHDK 509
Query: 541 EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK 600
EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK
Sbjct: 510 EIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHSVNGITEEADPTIYSGK 569
Query: 601 VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG 660
VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG
Sbjct: 570 VIRPLRSVDPTQTEYQGMIEIVEEGDMKGEVYPFGIVGMANKGDCLQKGESVKFQLCVLG 629
Query: 661 QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS 720
QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS
Sbjct: 630 QNAQTMAYNITPLRRATVECVKDQFGFINYEVGDSKKLFFHVKEVQDGIELQAGDEVEFS 689
Query: 721 VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD 780
VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD
Sbjct: 690 VILNQRTGKCSACNVWRVCEGPKAVAAPRPDRLVNRLKNITLDDASAPRLMVLRQPRGPD 749
Query: 781 NSMGFGAERKIRQAGVID 798
NSMGFGAERKIRQAGVID
Sbjct: 750 NSMGFGAERKIRQAGVID 767
>gi|109715854 calcium-regulated heat-stable protein 1 [Homo sapiens]
Length = 147
Score = 33.9 bits (76), Expect = 0.61
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 531 GFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSK--GKGNKVSAEKVNKTHSVNGI 588
GFI A+ +IF H S+ G+ +E GD V Y + K K+ A +V TH G
Sbjct: 77 GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEVVITHLAPGT 135
Query: 589 TEEADPTIYSGKVI 602
E +SG VI
Sbjct: 136 KHET----WSGHVI 145
>gi|109715858 calcium-regulated heat-stable protein 1 [Homo sapiens]
Length = 147
Score = 33.9 bits (76), Expect = 0.61
Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 531 GFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSK--GKGNKVSAEKVNKTHSVNGI 588
GFI A+ +IF H S+ G+ +E GD V Y + K K+ A +V TH G
Sbjct: 77 GFITPADGGPDIFLHISDVEGEYVPVE-GDEVTYKMCSIPPKNEKLQAVEVVITHLAPGT 135
Query: 589 TEEADPTIYSGKVI 602
E +SG VI
Sbjct: 136 KHET----WSGHVI 145
>gi|54792100 erbB-3 isoform 1 precursor [Homo sapiens]
Length = 1342
Score = 33.1 bits (74), Expect = 1.0
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 599 GKVIRPLRSVDPTQTEYQGMIEIVEEGDM-KGEVYPFGIVGMANKGDCLQKGESVKFQLC 657
G+ I PL DP++ + + I +E ++ K +V G+ G +KG + +GES+K +C
Sbjct: 684 GESIEPL---DPSEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVC 740
Query: 658 V 658
+
Sbjct: 741 I 741
>gi|162417982 zinc finger protein 64 isoform d [Homo sapiens]
Length = 645
Score = 32.3 bits (72), Expect = 1.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 92 QEILPEERMNGQV--VCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGN 149
Q LP E Q V ++P +K P P + CY G F Y +D+E +
Sbjct: 108 QTYLPTESNENQTATVISLPAKSRTKKPTTPPAQKRLNCCYP--GCQFKTAYGMKDMERH 165
Query: 150 VQLETGDK 157
+++ TGDK
Sbjct: 166 LKIHTGDK 173
>gi|40806227 zinc finger protein 64 isoform c [Homo sapiens]
Length = 679
Score = 32.3 bits (72), Expect = 1.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 92 QEILPEERMNGQV--VCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGN 149
Q LP E Q V ++P +K P P + CY G F Y +D+E +
Sbjct: 106 QTYLPTESNENQTATVISLPAKSRTKKPTTPPAQKRLNCCYP--GCQFKTAYGMKDMERH 163
Query: 150 VQLETGDK 157
+++ TGDK
Sbjct: 164 LKIHTGDK 171
>gi|40806223 zinc finger protein 64 isoform a [Homo sapiens]
Length = 681
Score = 32.3 bits (72), Expect = 1.8
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 92 QEILPEERMNGQV--VCAVPHNLESKSPAAPGQSPTGSVCYERNGEVFYLTYTPEDVEGN 149
Q LP E Q V ++P +K P P + CY G F Y +D+E +
Sbjct: 108 QTYLPTESNENQTATVISLPAKSRTKKPTTPPAQKRLNCCYP--GCQFKTAYGMKDMERH 165
Query: 150 VQLETGDK 157
+++ TGDK
Sbjct: 166 LKIHTGDK 173
>gi|156415990 Y box binding protein 2 [Homo sapiens]
Length = 364
Score = 31.2 bits (69), Expect = 4.0
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 193 MKEAFGFIERGDVVKEIFFHYSEFKGD-----LETLQPGDDVEFTIKDRNGKEVATDV 245
++ +GFI R D +++F H + K + L ++ G+ VEF + + AT+V
Sbjct: 103 VRNGYGFINRNDTKEDVFVHQTAIKRNNPRKFLRSVGDGETVEFDVVEGEKGAEATNV 160
>gi|120953300 leucine-rich repeats and IQ motif containing 1 isoform
1 [Homo sapiens]
Length = 1722
Score = 30.8 bits (68), Expect = 5.2
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 57 NGNLQDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKS 116
+ N L+ G E+E SS++ L+KI EI EE M + CA P + S
Sbjct: 89 SNNHMHLRTGLSTEYEESSEQ---------LIKILSEIEKEEFMRSKTDCATPDFVPEPS 139
Query: 117 P 117
P
Sbjct: 140 P 140
>gi|120953243 leucine-rich repeats and IQ motif containing 1 isoform
2 [Homo sapiens]
Length = 1336
Score = 30.8 bits (68), Expect = 5.2
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 9/61 (14%)
Query: 57 NGNLQDLKVGDDVEFEVSSDRRTGKPIAVKLVKIKQEILPEERMNGQVVCAVPHNLESKS 116
+ N L+ G E+E SS++ L+KI EI EE M + CA P + S
Sbjct: 89 SNNHMHLRTGLSTEYEESSEQ---------LIKILSEIEKEEFMRSKTDCATPDFVPEPS 139
Query: 117 P 117
P
Sbjct: 140 P 140
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 30.4 bits (67), Expect = 6.8
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 5/57 (8%)
Query: 156 DKINFVIDNNKHTGAVSARNIMLLKKKQARCQGVVCAMKEAF--GFIERGDVVKEIF 210
D I +VI K + + RN+ L RC+ V C + EA GF+ GD EIF
Sbjct: 5423 DNIKYVISEEKGSHTLKIRNVCLSDSATYRCRAVNC-VGEAICRGFLTMGD--SEIF 5476
>gi|34098946 nuclease sensitive element binding protein 1 [Homo
sapiens]
Length = 324
Score = 30.4 bits (67), Expect = 6.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 193 MKEAFGFIERGDVVKEIFFHYSEFKGD-----LETLQPGDDVEF-TIKDRNGKEVA 242
++ +GFI R D +++F H + K + L ++ G+ VEF ++ G E A
Sbjct: 68 VRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA 123
>gi|224586884 cold shock domain protein A isoform b [Homo sapiens]
Length = 303
Score = 30.4 bits (67), Expect = 6.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 193 MKEAFGFIERGDVVKEIFFHYSEFKGD-----LETLQPGDDVEF-TIKDRNGKEVA 242
++ +GFI R D +++F H + K + L ++ G+ VEF ++ G E A
Sbjct: 100 VRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA 155
>gi|224586882 cold shock domain protein A isoform a [Homo sapiens]
Length = 372
Score = 30.4 bits (67), Expect = 6.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 6/56 (10%)
Query: 193 MKEAFGFIERGDVVKEIFFHYSEFKGD-----LETLQPGDDVEF-TIKDRNGKEVA 242
++ +GFI R D +++F H + K + L ++ G+ VEF ++ G E A
Sbjct: 100 VRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAA 155
>gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo
sapiens]
Length = 788
Score = 30.4 bits (67), Expect = 6.8
Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 17/154 (11%)
Query: 218 GDLETLQPGDDVE--FTIKDRNGKEVATDVRLLP--QGTVIFEDISIEHFEGTVTKVIPK 273
GD ++P +E KD +G E +L+P + T + + S +G TKV
Sbjct: 387 GDQTPIEPQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKVAQG 446
Query: 274 VPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRR-DKLERAT 332
K+ D KV +E ++ K EG+ + D+ DK E
Sbjct: 447 ATEKSPED------KVQIAANEETQEREEQMK------EGEETEGSEEDDKENDKTEEMP 494
Query: 333 NIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCV 366
N VL N NE E+G + D K +
Sbjct: 495 NDSVLENKSLQENEEEEIGNLELAWDMLDLAKII 528
>gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo
sapiens]
Length = 790
Score = 30.4 bits (67), Expect = 6.8
Identities = 38/154 (24%), Positives = 58/154 (37%), Gaps = 17/154 (11%)
Query: 218 GDLETLQPGDDVE--FTIKDRNGKEVATDVRLLP--QGTVIFEDISIEHFEGTVTKVIPK 273
GD ++P +E KD +G E +L+P + T + + S +G TKV
Sbjct: 389 GDQTPIEPQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKVAQG 448
Query: 274 VPSKNQNDPLPGRIKVDFVIPKELPFGDKDTKSKVTLLEGDHVRFNISTDRR-DKLERAT 332
K+ D KV +E ++ K EG+ + D+ DK E
Sbjct: 449 ATEKSPED------KVQIAANEETQEREEQMK------EGEETEGSEEDDKENDKTEEMP 496
Query: 333 NIEVLSNTFQFTNEAREMGVIAAMRDGFGFIKCV 366
N VL N NE E+G + D K +
Sbjct: 497 NDSVLENKSLQENEEEEIGNLELAWDMLDLAKII 530
>gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens]
Length = 4557
Score = 30.0 bits (66), Expect = 8.8
Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 14/167 (8%)
Query: 467 KLTIAFQAKDVEGSTSPQIGDKVEFSISDKQRPGQQVATCVRLLGRNSNSKRLLGYVATL 526
++ + +D+ ++ +G ++ PG + V + ++ + YV L
Sbjct: 2067 RVVVRVNIEDINDNSPVFVGLPYYAAVQVDAEPGTLIYQ-VTAIDKDKGPNGEVTYV--L 2123
Query: 527 KDNFGFIETANHDKEIFFHYSEFSGDVDSLELGDMVEYSLSKGKGNKVSAEKVNKTHS-V 585
+D++G E + + + F+ D+ ++E G + L+K G + V + V
Sbjct: 2124 QDDYGHFEINPNSGNVILKEA-FNSDLSNIEYGVTI---LAKDGGKPSLSTSVELPITIV 2179
Query: 586 NGITEEADPTIYSGKV---IR---PLRSVDPTQTEYQGMIEIVEEGD 626
N D Y+ V IR P+ S++ T E QG+I I+ +GD
Sbjct: 2180 NKAMPVFDKPFYTASVNEDIRMNTPILSINATSPEGQGIIYIIIDGD 2226
>gi|85797660 limkain b1 [Homo sapiens]
Length = 1742
Score = 30.0 bits (66), Expect = 8.8
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 87 LVKIKQEILPEERMNGQVVCAVPHNLESKSPAAPGQSPTGS 127
L K+ + E+ NG++VC +P + +SP QS GS
Sbjct: 917 LYKLTDTVAIREQGNGRLVCLLPSSQARQSPLGSSQSHDGS 957
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,507,376
Number of Sequences: 37866
Number of extensions: 1406555
Number of successful extensions: 3224
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3088
Number of HSP's gapped (non-prelim): 30
length of query: 798
length of database: 18,247,518
effective HSP length: 110
effective length of query: 688
effective length of database: 14,082,258
effective search space: 9688593504
effective search space used: 9688593504
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.