Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 56090586
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56090586 coagulation factor VIII-associated (intronic
transcript) 3 [Homo sapiens]
(371 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12056463 coagulation factor VIII-associated protein [Homo sap... 733 0.0
gi|56090586 coagulation factor VIII-associated (intronic transcr... 733 0.0
gi|56090588 coagulation factor VIII-associated (intronic transcr... 733 0.0
gi|158534059 formin binding protein 4 [Homo sapiens] 46 5e-05
gi|166362732 ELK1 protein [Homo sapiens] 45 8e-05
gi|166362730 ELK1 protein [Homo sapiens] 45 8e-05
gi|12751477 forkhead box L2 [Homo sapiens] 45 1e-04
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 44 3e-04
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 43 4e-04
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 43 4e-04
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 43 4e-04
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 43 4e-04
gi|11386183 WAS protein family, member 2 [Homo sapiens] 42 0.001
gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo sa... 42 0.001
gi|157277988 phosphodiesterase 4D isoform 1 [Homo sapiens] 41 0.002
gi|90903231 huntingtin [Homo sapiens] 41 0.002
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 41 0.002
gi|157168329 formin 1 [Homo sapiens] 41 0.002
gi|5031763 hairy and enhancer of split 1 [Homo sapiens] 41 0.002
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 41 0.002
gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens] 41 0.002
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 41 0.002
gi|50428940 mediator complex subunit 25 [Homo sapiens] 40 0.003
gi|239757446 PREDICTED: similar to mCG146261 [Homo sapiens] 40 0.003
gi|239751965 PREDICTED: similar to mCG146261 [Homo sapiens] 40 0.003
gi|239746447 PREDICTED: hypothetical protein XP_002344225 [Homo ... 40 0.003
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 40 0.004
gi|151301171 RNA polymerase II transcription factor TAFII140 [Ho... 40 0.004
gi|21071077 dishevelled-associated activator of morphogenesis 1 ... 40 0.004
gi|116734706 interferon regulatory factor 2 binding protein 2 is... 40 0.004
>gi|12056463 coagulation factor VIII-associated protein [Homo
sapiens]
Length = 371
Score = 733 bits (1893), Expect = 0.0
Identities = 371/371 (100%), Positives = 371/371 (100%)
Query: 1 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ 60
MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ
Sbjct: 1 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ 60
Query: 61 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA 120
ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA
Sbjct: 61 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA 120
Query: 121 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA 180
AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA
Sbjct: 121 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA 180
Query: 181 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL 240
LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL
Sbjct: 181 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL 240
Query: 241 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW 300
PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW
Sbjct: 241 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW 300
Query: 301 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL 360
EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL
Sbjct: 301 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL 360
Query: 361 QETISPSGQGV 371
QETISPSGQGV
Sbjct: 361 QETISPSGQGV 371
>gi|56090586 coagulation factor VIII-associated (intronic
transcript) 3 [Homo sapiens]
Length = 371
Score = 733 bits (1893), Expect = 0.0
Identities = 371/371 (100%), Positives = 371/371 (100%)
Query: 1 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ 60
MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ
Sbjct: 1 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ 60
Query: 61 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA 120
ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA
Sbjct: 61 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA 120
Query: 121 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA 180
AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA
Sbjct: 121 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA 180
Query: 181 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL 240
LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL
Sbjct: 181 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL 240
Query: 241 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW 300
PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW
Sbjct: 241 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW 300
Query: 301 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL 360
EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL
Sbjct: 301 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL 360
Query: 361 QETISPSGQGV 371
QETISPSGQGV
Sbjct: 361 QETISPSGQGV 371
>gi|56090588 coagulation factor VIII-associated (intronic
transcript) 2 [Homo sapiens]
Length = 371
Score = 733 bits (1893), Expect = 0.0
Identities = 371/371 (100%), Positives = 371/371 (100%)
Query: 1 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ 60
MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ
Sbjct: 1 MAAAAAGLGGGGAGPGPEAGDFLARYRLVSNKLKKRFLRKPNVAEAGEQFGQLGRELRAQ 60
Query: 61 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA 120
ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA
Sbjct: 61 ECLPYAAWCQLAVARCQQALFHGPGEALALTEAARLFLRQERDARQRLVCPAAYGEPLQA 120
Query: 121 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA 180
AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA
Sbjct: 121 AASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAA 180
Query: 181 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL 240
LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL
Sbjct: 181 LQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPAL 240
Query: 241 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW 300
PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW
Sbjct: 241 PAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPEHAQTLEKYSW 300
Query: 301 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL 360
EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL
Sbjct: 301 EAFDSHGQESSGQLPEELFLLLQSLVMATHEKDTEAIKSLQVEMWPLLTAEQNHLLHLVL 360
Query: 361 QETISPSGQGV 371
QETISPSGQGV
Sbjct: 361 QETISPSGQGV 371
>gi|158534059 formin binding protein 4 [Homo sapiens]
Length = 1017
Score = 46.2 bits (108), Expect = 5e-05
Identities = 29/86 (33%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 158 PAAAAGHFQRAAQLQLPQLPLAALQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSH 217
PAA GH R LQ L LAA A+ A C + + V + + G+
Sbjct: 845 PAAGMGHQARGMSLQSNYLGLAAAPAIMSYAECSV-------PIGVTAPSLQPVQARGAV 897
Query: 218 PVQSL--PPPPPPAPQPGPGATPALP 241
P ++ PPPPPP P P P P +P
Sbjct: 898 PTATIIEPPPPPPPPPPPPPPAPKMP 923
Score = 30.8 bits (68), Expect = 2.0
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 218 PVQSLPPPPPPAPQPGPGATPALPA 242
P++ PPPPPP P P P PA
Sbjct: 708 PLEMPPPPPPPPESPPPPPPPPPPA 732
Score = 29.6 bits (65), Expect = 4.5
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 222 LPPPPPPAPQPGPGATPALPAA 243
+PPPPPP P+ P P P A
Sbjct: 711 MPPPPPPPPESPPPPPPPPPPA 732
>gi|166362732 ELK1 protein [Homo sapiens]
Length = 428
Score = 45.4 bits (106), Expect = 8e-05
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 214 HGSHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSPAALGAFSDVLVRCEVSR 273
+ + +QSL P PPP P+P A PA P SGS + SP+ L + + E +
Sbjct: 159 YSTFTIQSLQPQPPPHPRPAVVLPSAAPAGAAAPPSGSRSTSPSPL----EACLEAEEAG 214
Query: 274 VLLLLLLQPPPAKLLPEHAQTLE 296
+ L ++L PP A L +E
Sbjct: 215 LPLQVILTPPEAPNLKSEELNVE 237
>gi|166362730 ELK1 protein [Homo sapiens]
Length = 428
Score = 45.4 bits (106), Expect = 8e-05
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Query: 214 HGSHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSPAALGAFSDVLVRCEVSR 273
+ + +QSL P PPP P+P A PA P SGS + SP+ L + + E +
Sbjct: 159 YSTFTIQSLQPQPPPHPRPAVVLPSAAPAGAAAPPSGSRSTSPSPL----EACLEAEEAG 214
Query: 274 VLLLLLLQPPPAKLLPEHAQTLE 296
+ L ++L PP A L +E
Sbjct: 215 LPLQVILTPPEAPNLKSEELNVE 237
>gi|12751477 forkhead box L2 [Homo sapiens]
Length = 376
Score = 45.1 bits (105), Expect = 1e-04
Identities = 43/156 (27%), Positives = 54/156 (34%), Gaps = 44/156 (28%)
Query: 111 PAAYGEPLQAAASALGAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQ 170
P Y AAA+A AA G P AAA + + L PAA+ G + R
Sbjct: 212 PMPYASCQMAAAAAAAAAAAAAAGPGSPGAAAVV--------KGLAGPAASYGPYTRVQS 263
Query: 171 LQLPQLPLAALQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAP 230
+ LP + + LG + PPPPP P
Sbjct: 264 MALPPGVVNSYNGLGGPPAA---------------------------------PPPPPHP 290
Query: 231 QPGPGATPALPAAL---LPPNSGSAAPSPAALGAFS 263
P P A AA PP+ G+AAP P L S
Sbjct: 291 HPHPHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPAS 326
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 43.5 bits (101), Expect = 3e-04
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 35/114 (30%)
Query: 204 FTRMQRLAREHGSH--------------PVQSLPPPPPPAPQ--PGPGATPALPAALLPP 247
F +++R A+++ H P PPPPPP P P P +TPA+PA+ P
Sbjct: 2012 FKQLERFAKQYRDHYDKLYPLRPQTPEPPPPPPPPPPPPLPAAPPQPASTPAIPASAPPI 2071
Query: 248 NSGSAAPS-----------PAALGAFSDVLVRCEVSRVLLLLLLQPPPAKLLPE 290
S + AP+ P L FS ++++ + LQ PA+L P+
Sbjct: 2072 TSPTIAPAQPSVPLTQLSMPMELPIFSPLMMQ--------TMPLQTLPAQLPPQ 2117
Score = 29.6 bits (65), Expect = 4.5
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 174 PQLPLAALQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPG 233
P LP + L + +S L + A Q ++ Q PPPPPA QP
Sbjct: 3162 PGLPTSGLP--NKPSSASLSSPTPAQATMAMGPQQPPQQQQQQQQPQVQQPPPPPAAQPP 3219
Query: 234 PGATPALP 241
P TP LP
Sbjct: 3220 P--TPQLP 3225
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.1 bits (100), Expect = 4e-04
Identities = 24/46 (52%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 219 VQSLPPPPPPAPQPGPGATPALP---AALLPPNSG-----SAAPSP 256
VQ LPPPPPP P P PG P+ P AL P SG S AP P
Sbjct: 420 VQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGP 465
Score = 31.6 bits (70), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 221 SLPPPPPPAPQPGPGATPALPAALLPPNSGSAAP 254
S PPPP P P P P PA PP AP
Sbjct: 346 STPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP 379
Score = 31.2 bits (69), Expect = 1.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 225 PPPPAPQPGPGATPALPAALLPPNSGSAAPSPAAL 259
PPPP P P P AL A +PP +P L
Sbjct: 348 PPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382
Score = 30.4 bits (67), Expect = 2.7
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 215 GSHPVQSLP-PPPPPAPQPGPGATPALPAAL--LPPNSGSAAPSPAALGAFSDVLVRCEV 271
G PV P PPPPP P P +T +L A++ PP P P A + +
Sbjct: 314 GRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPA 373
Query: 272 SRVLLLLLLQPPPAKLLPEHAQ 293
+ +L P P + P Q
Sbjct: 374 PLQIAPGVLHPAPPPIAPPLVQ 395
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.1 bits (100), Expect = 4e-04
Identities = 24/46 (52%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 219 VQSLPPPPPPAPQPGPGATPALP---AALLPPNSG-----SAAPSP 256
VQ LPPPPPP P P PG P+ P AL P SG S AP P
Sbjct: 420 VQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGP 465
Score = 31.6 bits (70), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 221 SLPPPPPPAPQPGPGATPALPAALLPPNSGSAAP 254
S PPPP P P P P PA PP AP
Sbjct: 346 STPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP 379
Score = 31.2 bits (69), Expect = 1.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 225 PPPPAPQPGPGATPALPAALLPPNSGSAAPSPAAL 259
PPPP P P P AL A +PP +P L
Sbjct: 348 PPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382
Score = 30.4 bits (67), Expect = 2.7
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 215 GSHPVQSLP-PPPPPAPQPGPGATPALPAAL--LPPNSGSAAPSPAALGAFSDVLVRCEV 271
G PV P PPPPP P P +T +L A++ PP P P A + +
Sbjct: 314 GRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPA 373
Query: 272 SRVLLLLLLQPPPAKLLPEHAQ 293
+ +L P P + P Q
Sbjct: 374 PLQIAPGVLHPAPPPIAPPLVQ 395
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.1 bits (100), Expect = 4e-04
Identities = 24/46 (52%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 219 VQSLPPPPPPAPQPGPGATPALP---AALLPPNSG-----SAAPSP 256
VQ LPPPPPP P P PG P+ P AL P SG S AP P
Sbjct: 420 VQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGP 465
Score = 31.6 bits (70), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 221 SLPPPPPPAPQPGPGATPALPAALLPPNSGSAAP 254
S PPPP P P P P PA PP AP
Sbjct: 346 STPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP 379
Score = 31.2 bits (69), Expect = 1.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 225 PPPPAPQPGPGATPALPAALLPPNSGSAAPSPAAL 259
PPPP P P P AL A +PP +P L
Sbjct: 348 PPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382
Score = 30.4 bits (67), Expect = 2.7
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 215 GSHPVQSLP-PPPPPAPQPGPGATPALPAAL--LPPNSGSAAPSPAALGAFSDVLVRCEV 271
G PV P PPPPP P P +T +L A++ PP P P A + +
Sbjct: 314 GRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPA 373
Query: 272 SRVLLLLLLQPPPAKLLPEHAQ 293
+ +L P P + P Q
Sbjct: 374 PLQIAPGVLHPAPPPIAPPLVQ 395
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 43.1 bits (100), Expect = 4e-04
Identities = 24/46 (52%), Positives = 25/46 (54%), Gaps = 8/46 (17%)
Query: 219 VQSLPPPPPPAPQPGPGATPALP---AALLPPNSG-----SAAPSP 256
VQ LPPPPPP P P PG P+ P AL P SG S AP P
Sbjct: 420 VQGLPPPPPPPPLPPPGIRPSSPVTVTALAHPPSGLHPTPSTAPGP 465
Score = 31.6 bits (70), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Query: 221 SLPPPPPPAPQPGPGATPALPAALLPPNSGSAAP 254
S PPPP P P P P PA PP AP
Sbjct: 346 STPPPPVPPPPPPPATALQAPAVPPPPAPLQIAP 379
Score = 31.2 bits (69), Expect = 1.6
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 225 PPPPAPQPGPGATPALPAALLPPNSGSAAPSPAAL 259
PPPP P P P AL A +PP +P L
Sbjct: 348 PPPPVPPPPPPPATALQAPAVPPPPAPLQIAPGVL 382
Score = 30.4 bits (67), Expect = 2.7
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 215 GSHPVQSLP-PPPPPAPQPGPGATPALPAAL--LPPNSGSAAPSPAALGAFSDVLVRCEV 271
G PV P PPPPP P P +T +L A++ PP P P A + +
Sbjct: 314 GRTPVFVSPTPPPPPPPLPSALSTSSLRASMTSTPPPPVPPPPPPPATALQAPAVPPPPA 373
Query: 272 SRVLLLLLLQPPPAKLLPEHAQ 293
+ +L P P + P Q
Sbjct: 374 PLQIAPGVLHPAPPPIAPPLVQ 395
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 41.6 bits (96), Expect = 0.001
Identities = 25/58 (43%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 216 SHPVQSLPPPPPPAPQPGPGATPALPA----ALLPPNSGSAAPS---PAALGAFSDVL 266
S P PPPPPP P PGP P A A+ PP S + P PA A SD+L
Sbjct: 384 SQPTGGAPPPPPPPPPPGPPPPPFTGADGQPAIPPPLSDTTKPKSSLPAVSDARSDLL 441
Score = 37.0 bits (84), Expect = 0.028
Identities = 16/39 (41%), Positives = 19/39 (48%)
Query: 218 PVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSP 256
P+ +PPPPPP PG P PP+ AAP P
Sbjct: 328 PMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAAPPP 366
Score = 33.1 bits (74), Expect = 0.41
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 3/40 (7%)
Query: 217 HPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSP 256
HP + PPPPPP P P LP L +G A P P
Sbjct: 358 HPDFAAPPPPPPPP---AADYPTLPPPPLSQPTGGAPPPP 394
Score = 30.4 bits (67), Expect = 2.7
Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 216 SHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSP 256
SHP + P PP P+PG A P P PP G P P
Sbjct: 298 SHPPPAPPLGSPPGPKPG-FAPPPAPPPPPPPMIGIPPPPP 337
>gi|156523244 membrane-associated ring finger (C3HC4) 11 [Homo
sapiens]
Length = 402
Score = 41.6 bits (96), Expect = 0.001
Identities = 30/84 (35%), Positives = 34/84 (40%), Gaps = 8/84 (9%)
Query: 209 RLAREHGSHPVQSLPPPPPPAPQPG-PGATPALPAALLPPNSGSAAPSPAA--LGAFSDV 265
R A + P PPPPPP P PG P PA P L P + P AA +V
Sbjct: 13 RGAESGDAEPPPQPPPPPPPTPPPGEPAPVPAAPRYLPPLPASPETPERAAGPSEPLGEV 72
Query: 266 LVRCEVSRVLLLLLLQPPPAKLLP 289
RC + L PPP L P
Sbjct: 73 APRCRGADE-----LPPPPLPLQP 91
>gi|157277988 phosphodiesterase 4D isoform 1 [Homo sapiens]
Length = 809
Score = 41.2 bits (95), Expect = 0.002
Identities = 36/114 (31%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 217 HPVQSLPPPPPPAPQPGPGA----TPALPAALLPPNSGSAAPSPAALGAFSDVLVR--CE 270
HP LPPPPPP+PQP P P P PP G+A A+ GA V R +
Sbjct: 52 HPHHHLPPPPPPSPQPQPQCPLQPPPPPPLPPPPPPPGAARGRYASSGATGRVRHRGYSD 111
Query: 271 VSRVLLLLLLQPPPAKLLPEHAQTLEK--YSWEA-------FDSHGQESSGQLP 315
R L + + H L+K SW + FD S+G+ P
Sbjct: 112 TERYLYCRAMDRTSYAVETGHRPGLKKSRMSWPSSFQGLRRFDVDNGTSAGRSP 165
>gi|90903231 huntingtin [Homo sapiens]
Length = 3144
Score = 41.2 bits (95), Expect = 0.002
Identities = 20/52 (38%), Positives = 24/52 (46%)
Query: 206 RMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSPA 257
+ Q+ ++ P PPPPP PQP P A P LP PP P PA
Sbjct: 30 QQQQQQQQQQQPPPPPPPPPPPQLPQPPPQAQPLLPQPQPPPPPPPPPPGPA 81
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 40.8 bits (94), Expect = 0.002
Identities = 21/35 (60%), Positives = 22/35 (62%), Gaps = 3/35 (8%)
Query: 218 PVQSLPPPPPPAPQPGPG-ATPALP--AALLPPNS 249
P Q PPPPPPAP PGPG A P P A LPP +
Sbjct: 31 PQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEA 65
Score = 40.0 bits (92), Expect = 0.003
Identities = 32/89 (35%), Positives = 41/89 (46%), Gaps = 16/89 (17%)
Query: 178 LAALQALGEAASCQLLARDYTGALAVFTRMQRLAREH--GSHPVQSLPPPPPPAPQPGPG 235
+A LQ + C +AR G LA+ + RL R G P + P PPPPA PG
Sbjct: 727 IATLQQAAAMSFCPQVARPLVGPLALGS--PRLVRRPPPGPAPAAASPGPPPPASPPGAP 784
Query: 236 ATP---------ALPAALLPPNSGSAAPS 255
A+P LPAA P +G A P+
Sbjct: 785 ASPRAPRTSPYGGLPAA---PLAGPALPA 810
Score = 35.4 bits (80), Expect = 0.083
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 8/43 (18%)
Query: 215 GSHPVQSLPPPPPPAP---QPGPGATPALPAALLPPNSGSAAP 254
G+ P PPPPPPAP QP P PA PP G A P
Sbjct: 15 GATPAPGPPPPPPPAPPQQQPPPPPPPA-----PPPGPGPAPP 52
Score = 30.0 bits (66), Expect = 3.5
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 223 PPPPPPAPQPGPGATPALPAALLPPNSGSAAP 254
PP PPP P P P P AL P + P
Sbjct: 40 PPAPPPGPGPAPPQHPPRAEALPPEAADEGGP 71
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 6/49 (12%)
Query: 218 PVQSLPPPPPPAPQPG------PGATPALPAALLPPNSGSAAPSPAALG 260
P+ PPPPPP P P P P LP + PPN G P+P G
Sbjct: 679 PLPPPPPPPPPLPPPSSAGPPPPPPPPPLPNSPAPPNPGGPPPAPPPPG 727
Score = 34.3 bits (77), Expect = 0.18
Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 9/41 (21%)
Query: 223 PPPPPPAPQ----PGPGATPALPAALLPPNSGSAAPSPAAL 259
PPPPPP P P PG P PA PP G A P P L
Sbjct: 701 PPPPPPLPNSPAPPNPGGPP--PA---PPPPGLAPPPPPGL 736
Score = 30.8 bits (68), Expect = 2.0
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 15/104 (14%)
Query: 157 QPAAAAGHFQRAAQLQLPQLPLAALQALGEAASCQLLARDYTGALAVFTRMQRLAREHGS 216
+P + R+ QL +L +++L L D+ A M+ +A S
Sbjct: 591 KPCESESKTTRSNQLVPKKLNISSLSQLSPP-------NDHKDIHAALQPMEGMA----S 639
Query: 217 HPVQSLPPPPPPAPQPGP---GATPALPAALLPP-NSGSAAPSP 256
+ ++LPPPP P P P G PA +PP ++G P P
Sbjct: 640 NQQKALPPPPASIPPPPPLPSGLGSLSPAPPMPPVSAGPPLPPP 683
>gi|5031763 hairy and enhancer of split 1 [Homo sapiens]
Length = 280
Score = 40.8 bits (94), Expect = 0.002
Identities = 20/40 (50%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 217 HPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSP 256
HP PPPPPP P GP P P L P G AAP P
Sbjct: 160 HPALQAPPPPPPGP-GGPQHAPFAPPPPLVPIPGGAAPPP 198
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 40.8 bits (94), Expect = 0.002
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 215 GSHPVQSLPPPPPPAPQPG-PGATPALPAALLPPNSGSAAPSP 256
G P + PPPPPP P P A+P P+A+ P SG ++P P
Sbjct: 775 GRGPPPAPPPPPPPPRAPADPAASPDPPSAVASPGSGLSSPGP 817
Score = 35.0 bits (79), Expect = 0.11
Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 6/60 (10%)
Query: 223 PPPPPPAPQPGPGATPALPAALLPPNSGSAAPSPAALGAF-----SDVLVRCEVSRVLLL 277
PPPPPP P+ GP P PA P ++P P L F DVL E SR L L
Sbjct: 448 PPPPPPPPRDGPFPWPWPPAHSAPRPGTLSSPFP-LLDGFPGADPDDVLTVTESSRGLNL 506
>gi|118766337 zinc finger protein of the cerebellum 5 [Homo sapiens]
Length = 663
Score = 40.8 bits (94), Expect = 0.002
Identities = 57/197 (28%), Positives = 68/197 (34%), Gaps = 42/197 (21%)
Query: 87 ALALTEAARLFLRQERDARQRLVCPAAYGEPLQAAASALGA--AVRLHLELGQPAAAAAL 144
A A AA L+ R E R A YG AAA+AL AV L+L L AAAAA
Sbjct: 287 AAAAAAAAELYGRAEPPFAPRSG-DAHYGAVAAAAAAALHGYGAVNLNLNLAAAAAAAA- 344
Query: 145 CLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAALQALGEAASCQLLARDYTGALAVF 204
A H Q A P P A Q + GA F
Sbjct: 345 --------------AGPGPHLQHHAPPPAPPPPPAPAQHPHQHHP------HLPGAAGAF 384
Query: 205 TRMQR-------LAREHGSHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSPA 257
R R + + + LPPPPPP P P P PP +G A P
Sbjct: 385 LRYMRQPIKQELICKWIDPDELAGLPPPPPP-PPPPPP----------PPPAGGAKPCSK 433
Query: 258 ALGAFSDVLVRCEVSRV 274
G +++ V V
Sbjct: 434 TFGTMHELVNHVTVEHV 450
Score = 32.3 bits (72), Expect = 0.70
Identities = 41/153 (26%), Positives = 53/153 (34%), Gaps = 25/153 (16%)
Query: 136 GQPAAAAALCLELAAALRDLGQPAAAAG------HFQRAAQLQL----------PQLPLA 179
G PA + LRDLG A H +A+ L L P+ P A
Sbjct: 61 GPPAHSQLRAAVAHLRLRDLGADPGVATTPLGPEHMAQASTLGLSPPSQAFPAHPEAPAA 120
Query: 180 ALQALGEAASCQLLARDYTGALAVFTRMQRLAREHGSHPVQSLPPPPPPAPQPGPGATPA 239
A +A L+A G+ P LPP P P P P P PA
Sbjct: 121 AARAAA------LVAHPGAGSYPCGGGSSGAQPSAPPPPAPPLPPTPSPPPPPPPPPPPA 174
Query: 240 LPAALLPPNSGSAAPSPAALGAFSDVLVRCEVS 272
L + NSG S G D ++R ++S
Sbjct: 175 L-SGYTTTNSGGGGSS--GKGHSRDFVLRRDLS 204
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 40.8 bits (94), Expect = 0.002
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 215 GSHPVQSLPPPPP---PAPQP--GPGATPALPAALLPPNS-GSAAPSPAALGAF 262
G +P ++P P P PAP P PGA P +P +PP + G AP PA G++
Sbjct: 159 GQYPTPNMPYPSPGPYPAPPPPQAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSY 212
Score = 30.0 bits (66), Expect = 3.5
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 215 GSHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSPAALG 260
G P P PP P PGP A P P+ P G P+P G
Sbjct: 65 GPAPTGMYPSVPPTGPPPGPPA-PFPPSGPSCPPPGGPYPAPTVPG 109
Score = 28.9 bits (63), Expect = 7.8
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 215 GSHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSPAALG 260
G +P ++P P P P P TP +P LP G A PAA G
Sbjct: 100 GPYPAPTVPGPGPTGPYP----TPNMPFPELPRPYG-APTDPAAAG 140
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 40.4 bits (93), Expect = 0.003
Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 36/139 (25%)
Query: 158 PAAAAGHFQRAAQLQ-LPQLPLAALQALGEAASCQLLARDYTGA-----------LAVFT 205
PAA +G AA Q LP +P Q G ++ Q+ A++ A + T
Sbjct: 249 PAAPSGATLSAAPQQPLPPVP-PQYQVPGNLSAAQVAAQNAVEAAKNQKAGLGPRFSPIT 307
Query: 206 RMQRLAREHG----SHPVQSLPPPPPPAPQPGPGATPALPAALLPPN------------- 248
+Q+ A G P LPP PP AP+P P + P+L + + P +
Sbjct: 308 PLQQAAPGVGPPFSQAPAPQLPPGPPGAPKPPPASQPSLVSTVAPGSGLAPTAQPGAPSM 367
Query: 249 ------SGSAAPSPAALGA 261
G + PSPA LGA
Sbjct: 368 AGTVAPGGVSGPSPAQLGA 386
Score = 31.2 bits (69), Expect = 1.6
Identities = 24/72 (33%), Positives = 26/72 (36%), Gaps = 21/72 (29%)
Query: 215 GSHPVQSLPPPPPPAPQPGPGAT--PALPAALLPPNSGSAAPSPAALGAFSDVLVRCEVS 272
G Q PPP APQ PGA P P +L P + A P
Sbjct: 603 GQPQPQGTAQPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQ----------------- 645
Query: 273 RVLLLLLLQPPP 284
L LLL PPP
Sbjct: 646 --LRSLLLNPPP 655
Score = 30.4 bits (67), Expect = 2.7
Identities = 25/74 (33%), Positives = 28/74 (37%), Gaps = 25/74 (33%)
Query: 222 LPPPPPPAPQPGPGAT------PALPAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVL 275
L PPPP P P A+ P PA L PP+ G P LG
Sbjct: 651 LNPPPPQTGVPPPQASLHHLQPPGAPALLPPPHQGLGQPQ---LGP-------------- 693
Query: 276 LLLLLQPPPAKLLP 289
LL PPPA+ P
Sbjct: 694 --PLLHPPPAQSWP 705
>gi|239757446 PREDICTED: similar to mCG146261 [Homo sapiens]
Length = 319
Score = 40.0 bits (92), Expect = 0.003
Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 126 GAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAALQALG 185
G LH LG P A + + L L G+ A AG + Q+P LP A LQ +G
Sbjct: 73 GQGRHLHTFLG-PGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVPLLPKAPLQLVG 131
Query: 186 -----EAASCQLLARDYTGALAVFTRMQRLAREHGS-----HPVQSLPPPPPPAPQPGPG 235
+ + LLA A + ++ L G +P PP PPP P G
Sbjct: 132 LRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSL 191
Query: 236 ATPALPAALLP 246
AT P LP
Sbjct: 192 ATSRAPGQSLP 202
>gi|239751965 PREDICTED: similar to mCG146261 [Homo sapiens]
Length = 319
Score = 40.0 bits (92), Expect = 0.003
Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 126 GAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAALQALG 185
G LH LG P A + + L L G+ A AG + Q+P LP A LQ +G
Sbjct: 73 GQGRHLHTFLG-PGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVPLLPKAPLQLVG 131
Query: 186 -----EAASCQLLARDYTGALAVFTRMQRLAREHGS-----HPVQSLPPPPPPAPQPGPG 235
+ + LLA A + ++ L G +P PP PPP P G
Sbjct: 132 LRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSL 191
Query: 236 ATPALPAALLP 246
AT P LP
Sbjct: 192 ATSRAPGQSLP 202
>gi|239746447 PREDICTED: hypothetical protein XP_002344225 [Homo
sapiens]
Length = 319
Score = 40.0 bits (92), Expect = 0.003
Identities = 40/131 (30%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 126 GAAVRLHLELGQPAAAAALCLELAAALRDLGQPAAAAGHFQRAAQLQLPQLPLAALQALG 185
G LH LG P A + + L L G+ A AG + Q+P LP A LQ +G
Sbjct: 73 GQGRHLHTFLG-PGALHLVAVVLEPDLDLRGREADEAGQVFALGRRQVPLLPKAPLQLVG 131
Query: 186 -----EAASCQLLARDYTGALAVFTRMQRLAREHGS-----HPVQSLPPPPPPAPQPGPG 235
+ + LLA A + ++ L G +P PP PPP P G
Sbjct: 132 LRLGEKHSPLSLLAGVPPAARGLLVIVRVLYDRAGGRVSYLYPGHPKPPHPPPVPGRGSL 191
Query: 236 ATPALPAALLP 246
AT P LP
Sbjct: 192 ATSRAPGQSLP 202
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 39.7 bits (91), Expect = 0.004
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 215 GSHPVQSLPPPPPPAPQPGPG-ATPALPAALLPPNSGSAAP 254
G P+ PPPPPP P G G A P LP AL+P +G AP
Sbjct: 389 GGPPMPPPPPPPPPPPSSGNGPAPPPLPPALVP--AGGLAP 427
Score = 33.1 bits (74), Expect = 0.41
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 9/44 (20%)
Query: 223 PPPPPPA---------PQPGPGATPALPAALLPPNSGSAAPSPA 257
PPPPPPA P PG G P P PP S+ PA
Sbjct: 368 PPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPA 411
Score = 32.0 bits (71), Expect = 0.92
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Query: 218 PVQSLPPPPPP--APQPGPGATPALPAALLPPNSGSAAPSP 256
P+ PPPP P P PG G P P PP +G + P P
Sbjct: 346 PLGIAPPPPTPRGPPPPGRGGPPPPP----PPATGRSGPLP 382
Score = 31.2 bits (69), Expect = 1.6
Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 220 QSLPPPPPPAPQPGPGATPALPAALLPPNSGSA-APSP 256
+S P PPPP GP P P PP+SG+ AP P
Sbjct: 377 RSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP 414
Score = 30.0 bits (66), Expect = 3.5
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 7/55 (12%)
Query: 208 QRLAREHGSHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAP--SPAALG 260
+R R+ G + LPPPP PA + G P LP L P P P +LG
Sbjct: 147 KRNQRQSGDR--RQLPPPPTPANEERRGGLPPLP---LHPGGDQGGPPVGPLSLG 196
Score = 29.6 bits (65), Expect = 4.5
Identities = 17/55 (30%), Positives = 22/55 (40%), Gaps = 14/55 (25%)
Query: 220 QSLPPPPPPA------PQP--------GPGATPALPAALLPPNSGSAAPSPAALG 260
+ LPPPPPP+ P+P G P +P + PP P P G
Sbjct: 311 EPLPPPPPPSRGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRG 365
>gi|151301171 RNA polymerase II transcription factor TAFII140 [Homo
sapiens]
Length = 929
Score = 39.7 bits (91), Expect = 0.004
Identities = 25/66 (37%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 218 PVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAA--------PSPAALGAFSDVLVRC 269
P Q+ P PPPAP P PG PA + P AA P PAA GA + VR
Sbjct: 787 PSQNRPKTPPPAPAPAPGPMLVSPAPVPLPLLAQAAAGPALLPSPGPAASGASAKAPVRS 846
Query: 270 EVSRVL 275
V+ +
Sbjct: 847 VVTETV 852
>gi|21071077 dishevelled-associated activator of morphogenesis 1
[Homo sapiens]
Length = 1078
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/105 (27%), Positives = 37/105 (35%), Gaps = 30/105 (28%)
Query: 216 SHPVQSLPPPPPPAPQPGPGATPALPAALLPPNSGSAAPSPAALGAFSDVLVRCEVSRVL 275
S P LPPPPPP P PG P LPP P P LGA
Sbjct: 543 SVPGSLLPPPPPP---PLPGGMLPPPPPPLPPGGPPPPPGPPPLGA-------------- 585
Query: 276 LLLLLQPPPA---------KLLPEHAQTLEKYSWEAFDSHGQESS 311
+ PPP K +P+ L+ ++W + E +
Sbjct: 586 ----IMPPPGAPMGLALKKKSIPQPTNALKSFNWSKLPENKLEGT 626
>gi|116734706 interferon regulatory factor 2 binding protein 2
isoform B [Homo sapiens]
Length = 571
Score = 39.7 bits (91), Expect = 0.004
Identities = 40/132 (30%), Positives = 47/132 (35%), Gaps = 29/132 (21%)
Query: 158 PAAAAGHFQRAAQLQLPQLPLAALQALG----EAASCQLLARDYTGALAVFTRMQRLARE 213
P AAA + L + L Q LG EAA A + A R RL +
Sbjct: 73 PGAAASAAAKPPPLSAKDILLQQQQQLGHGGPEAAPRAPQALERYPLAAAAERPPRLGSD 132
Query: 214 HGS-HPVQSLPPPPPPAP------------------------QPGPGATPALPAALLPPN 248
GS P SL PP P P P P A+P L+P
Sbjct: 133 FGSSRPAASLAQPPTPQPPPVNGILVPNGFSKLEEPPELNRQSPNPRRGHAVPPTLVPLM 192
Query: 249 SGSAAPSPAALG 260
+GSA P P ALG
Sbjct: 193 NGSATPLPTALG 204
Score = 30.4 bits (67), Expect = 2.7
Identities = 45/164 (27%), Positives = 59/164 (35%), Gaps = 30/164 (18%)
Query: 160 AAAGHFQRAAQLQLPQLPLAALQALGEAASCQLLARDYTGALAV---FTRMQRLAREHGS 216
AAA Q LP++P A + E + +Y GA V ++L R HG
Sbjct: 8 AAASRRQSCYLCDLPRMPWAMIWDFTEPVCRGCV--NYEGADRVEFVIETARQLKRAHGC 65
Query: 217 HPVQSLPP---------PPPPAPQP------------GPGATPALPAALLPPNSGSAAPS 255
P PP PPP + + GP A P P AL +AA
Sbjct: 66 FPEGRSPPGAAASAAAKPPPLSAKDILLQQQQQLGHGGPEAAPRAPQALERYPLAAAAER 125
Query: 256 PAALGAFSDVLVRCEVSRVLLLLLLQPPPAK--LLPEHAQTLEK 297
P LG SD + + QPPP L+P LE+
Sbjct: 126 PPRLG--SDFGSSRPAASLAQPPTPQPPPVNGILVPNGFSKLEE 167
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,160,794
Number of Sequences: 37866
Number of extensions: 974910
Number of successful extensions: 24431
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 610
Number of HSP's that attempted gapping in prelim test: 13461
Number of HSP's gapped (non-prelim): 7410
length of query: 371
length of database: 18,247,518
effective HSP length: 104
effective length of query: 267
effective length of database: 14,309,454
effective search space: 3820624218
effective search space used: 3820624218
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.