Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PLAU Sequence: fasta or formatted (414aa) NCBI GI: 222537759
Description:

plasminogen activator, urokinase isoform 2

Referenced in:

Coagulation

Other entries for this name:
alt prot [431aa] plasminogen activator, urokinase isoform 1 preproprotein
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.1         17           2
 C cysteine            5.8         24           1
 D aspartate           4.3         18           1
 E glutamate           4.8         20           2
 F phenylalanine       3.1         13           1
 G glycine             8.5         35           2
 H histidine           4.1         17           2
 I isoleucine          4.6         19           2
 K lysine              6.5         27           2
 L leucine             7.5         31           2
 M methionine          1.9          8           1
 N asparagine          4.3         18           1
 P proline             5.3         22           2
 Q glutamine           4.8         20           2
 R arginine            5.8         24           3
 S serine              6.8         28           2
 T threonine           6.5         27           2
 V valine              4.6         19           2
 W tryptophan          1.9          8           1
 Y tyrosine            4.6         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   plasminogen activator, urokinase isoform 2 
PLAU                  0.972   plasminogen activator, urokinase isoform 1 preproprot...
PLAT                  0.315   plasminogen activator, tissue isoform 1 preproprotein...
PLAT                  0.315   plasminogen activator, tissue isoform 3 preproprotei...
HGFAC                 0.289   HGF activator preproprotein 
F12                   0.263   coagulation factor XII precursor 
HABP2                 0.253   hyaluronan binding protein 2 preproprotein 
PLG                   0.179   plasminogen 
PRSS12                0.167   neurotrypsin precursor 
LPA                   0.165   lipoprotein Lp(a) precursor 
PRSS33                0.163   protease, serine, 33 
TMPRSS11D             0.157   transmembrane protease, serine 11D 
TMPRSS13              0.154   transmembrane protease, serine 13 
TMPRSS6               0.148   transmembrane protease, serine 6 
KLKB1                 0.147   plasma kallikrein B1 precursor 
PRSS8                 0.146   prostasin preproprotein 
TMPRSS9               0.146   transmembrane protease, serine 9 
KLK13                 0.146   kallikrein 13 precursor 
TMPRSS5               0.142   transmembrane protease, serine 5 
HPN                   0.138   hepsin 
KLK6                  0.138   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.138   kallikrein-related peptidase 6 isoform A preproprotei...
HPN                   0.138   hepsin 
MST1                  0.136   macrophage stimulating 1 (hepatocyte growth factor-...
CTRB1                 0.134   chymotrypsin B1 
CTRL                  0.134   chymotrypsin-like 
PRSS1                 0.134   protease, serine, 1 preproprotein 
PRSS3                 0.134   mesotrypsin isoform 1 preproprotein 
PRSS3                 0.134   mesotrypsin isoform 2 preproprotein 
TPSG1                 0.134   transmembrane tryptase preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press