Guide to the Human Genome
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Name: HGF Sequence: fasta or formatted (210aa) NCBI GI: 58533167
Description:

hepatocyte growth factor isoform 5 precursor

Referenced in:

Coagulation
Liver
Receptor Tyrosine Kinases

Other entries for this name:
alt prot [728aa] hepatocyte growth factor isoform 1 preproprotein
alt prot [290aa] hepatocyte growth factor isoform 2 precursor
alt prot [285aa] hepatocyte growth factor isoform 4 precursor
alt prot [723aa] hepatocyte growth factor isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3          9           1
 C cysteine            4.8         10           1
 D aspartate           3.3          7           1
 E glutamate           5.7         12           2
 F phenylalanine       4.8         10           1
 G glycine             6.2         13           2
 H histidine           2.9          6           1
 I isoleucine          6.2         13           2
 K lysine             11.0         23           2
 L leucine             8.6         18           4
 M methionine          1.4          3           1
 N asparagine          4.8         10           1
 P proline             6.2         13           1
 Q glutamine           3.3          7           1
 R arginine            5.7         12           2
 S serine              6.7         14           2
 T threonine           5.2         11           2
 V valine              3.8          8           1
 W tryptophan          1.9          4           1
 Y tyrosine            3.3          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hepatocyte growth factor isoform 5 precursor 
HGF                   0.991   hepatocyte growth factor isoform 2 precursor 
HGF                   0.991   hepatocyte growth factor isoform 1 preproprotein [Ho...
HGF                   0.953   hepatocyte growth factor isoform 4 precursor 
HGF                   0.953   hepatocyte growth factor isoform 3 precursor 
PLG                   0.254   plasminogen 
MST1                  0.244   macrophage stimulating 1 (hepatocyte growth factor-...
LPA                   0.175   lipoprotein Lp(a) precursor 
F2                    0.171   coagulation factor II preproprotein 
ROR2                  0.161   receptor tyrosine kinase-like orphan receptor 2 prec...
LPAL2                 0.161   lipoprotein, Lp(a)-like 2 precursor 
LPAL2                 0.161   lipoprotein, Lp(a)-like 2 precursor 
ROR1                  0.149   receptor tyrosine kinase-like orphan receptor 1 iso...
ROR1                  0.147   receptor tyrosine kinase-like orphan receptor 1 iso...
PLAT                  0.107   plasminogen activator, tissue isoform 1 preproprotein...
PLAT                  0.107   plasminogen activator, tissue isoform 3 preproprotei...
F12                   0.071   coagulation factor XII precursor 
HABP2                 0.071   hyaluronan binding protein 2 preproprotein 
KREMEN1               0.062   kringle-containing transmembrane protein 1 isoform 2...
KREMEN1               0.062   kringle-containing transmembrane protein 1 isoform ...
LOC100289195          0.059   PREDICTED: hypothetical protein XP_002342719 
HGFAC                 0.057   HGF activator preproprotein 
PLAU                  0.055   plasminogen activator, urokinase isoform 2 
PLAU                  0.055   plasminogen activator, urokinase isoform 1 preproprot...
KREMEN2               0.040   kringle-containing transmembrane protein 2 isoform b...
KREMEN2               0.040   kringle-containing transmembrane protein 2 isoform d...
PRSS12                0.033   neurotrypsin precursor 
PIK3IP1               0.031   HGFL protein isoform 2 
PIK3IP1               0.031   HGFL protein isoform 1 
PLGLB1                0.019   plasminogen-like B1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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