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Search of human proteins with 55953127
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55953127 RWD domain containing 1 isoform b [Homo sapiens]
(147 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55953127 RWD domain containing 1 isoform b [Homo sapiens] 294 2e-80
gi|55953125 RWD domain containing 1 isoform b [Homo sapiens] 294 2e-80
gi|55953123 RWD domain containing 1 isoform a [Homo sapiens] 294 2e-80
gi|118150660 erythropoietin 4 immediate early response [Homo sap... 42 1e-04
gi|225579095 S-phase cyclin A-associated protein in the ER isofo... 40 0.001
gi|225579092 S-phase cyclin A-associated protein in the ER isofo... 40 0.001
gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens] 39 0.002
gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 39 0.002
gi|32967605 bromodomain adjacent to zinc finger domain, 1A isofo... 39 0.002
gi|32967603 bromodomain adjacent to zinc finger domain, 1A isofo... 39 0.002
gi|169161522 PREDICTED: similar to cell division cycle 2-like 1 ... 38 0.003
gi|38569484 kinesin family member 21A [Homo sapiens] 38 0.003
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 38 0.003
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 37 0.005
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 37 0.005
gi|239747195 PREDICTED: similar to PITSLRE protein kinase beta S... 37 0.005
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.005
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.005
gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens] 37 0.005
gi|8922712 septin 11 [Homo sapiens] 37 0.006
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 37 0.008
gi|195976782 Paf1/RNA polymerase II complex component [Homo sapi... 37 0.008
gi|21361478 septin 6 isoform B [Homo sapiens] 36 0.010
gi|22035581 septin 6 isoform D [Homo sapiens] 36 0.010
gi|22035579 septin 6 isoform A [Homo sapiens] 36 0.010
gi|46276863 parathymosin [Homo sapiens] 36 0.010
gi|8922633 high-mobility group 20A [Homo sapiens] 36 0.010
gi|22035577 septin 6 isoform A [Homo sapiens] 36 0.010
gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo ... 36 0.010
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 36 0.013
>gi|55953127 RWD domain containing 1 isoform b [Homo sapiens]
Length = 147
Score = 294 bits (753), Expect = 2e-80
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKA 60
MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKA
Sbjct: 1 MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKA 60
Query: 61 KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQ
Sbjct: 61 KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
Query: 121 EMDDLELEDDEDDPDYNPADPESDSAD 147
EMDDLELEDDEDDPDYNPADPESDSAD
Sbjct: 121 EMDDLELEDDEDDPDYNPADPESDSAD 147
>gi|55953125 RWD domain containing 1 isoform b [Homo sapiens]
Length = 147
Score = 294 bits (753), Expect = 2e-80
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKA 60
MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKA
Sbjct: 1 MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKA 60
Query: 61 KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQ
Sbjct: 61 KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
Query: 121 EMDDLELEDDEDDPDYNPADPESDSAD 147
EMDDLELEDDEDDPDYNPADPESDSAD
Sbjct: 121 EMDDLELEDDEDDPDYNPADPESDSAD 147
>gi|55953123 RWD domain containing 1 isoform a [Homo sapiens]
Length = 243
Score = 294 bits (753), Expect = 2e-80
Identities = 147/147 (100%), Positives = 147/147 (100%)
Query: 1 MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKA 60
MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKA
Sbjct: 97 MVMIFTLVTAVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKA 156
Query: 61 KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQ
Sbjct: 157 KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 216
Query: 121 EMDDLELEDDEDDPDYNPADPESDSAD 147
EMDDLELEDDEDDPDYNPADPESDSAD
Sbjct: 217 EMDDLELEDDEDDPDYNPADPESDSAD 243
>gi|118150660 erythropoietin 4 immediate early response [Homo
sapiens]
Length = 426
Score = 42.4 bits (98), Expect = 1e-04
Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 20/120 (16%)
Query: 27 EEEKKQKEKEAEEAEKQLFHG---------TPVTIENFLNWKAKFDAE---LLEIKKKRM 74
+++KK++EKE E + + L T +T+E+FL WK + E LE +R
Sbjct: 218 KKDKKKEEKEDEISLEDLIERERSALGPNVTKITLESFLAWKKRKRQEKIDKLEQDMERR 277
Query: 75 KEEEQAGKN-KLSGKQLFE------TDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLEL 127
K + +AGK +SG+++FE D + + D ++ + G + EVD+S+ DL L
Sbjct: 278 KADFKAGKALVISGREVFEFRPELVNDDDEEADDTRYTQGTGGD-EVDDSVSVNDIDLSL 336
>gi|225579095 S-phase cyclin A-associated protein in the ER isoform
b [Homo sapiens]
Length = 1154
Score = 39.7 bits (91), Expect = 0.001
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 12 QEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKK 71
+++LNE+ ++ + RR+EEK+ +++ +E ++ L +E L + + +A + + ++
Sbjct: 403 EQRLNELQEE-RQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQ 461
Query: 72 KRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEV--DESLFQEMDDLE 126
++ K E A + + ++ E L + + +E+ +++ DES+ + M+ +E
Sbjct: 462 EKEKAREDAARERARDRE--ERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIE 516
>gi|225579092 S-phase cyclin A-associated protein in the ER isoform
a [Homo sapiens]
Length = 1400
Score = 39.7 bits (91), Expect = 0.001
Identities = 24/117 (20%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 12 QEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKK 71
+++LNE+ ++ + RR+EEK+ +++ +E ++ L +E L + + +A + + ++
Sbjct: 649 EQRLNELQEE-RQRRQEEKQARDEAVQERKRALEAERQARVEELLMKRKEQEARIEQQRQ 707
Query: 72 KRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEV--DESLFQEMDDLE 126
++ K E A + + ++ E L + + +E+ +++ DES+ + M+ +E
Sbjct: 708 EKEKAREDAARERARDRE--ERLAALTAAQQEAMEELQKKIQLKHDESIRRHMEQIE 762
>gi|41327691 kinesin-like motor protein C20orf23 [Homo sapiens]
Length = 1317
Score = 38.9 bits (89), Expect = 0.002
Identities = 32/122 (26%), Positives = 65/122 (53%), Gaps = 15/122 (12%)
Query: 14 KLNEIVDQIKTRREEEK---KQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIK 70
+L + +++T+R+E + Q K+ E +++ FH IEN L AE + +
Sbjct: 629 ELERMQQEVETQRKETEIVQLQIRKQEESLKRRSFH-----IENKLK---DLLAEKEKFE 680
Query: 71 KKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDE-SLFQEMDDLELED 129
++R++E+++ +L K+ E ++Q L++ NN + ++ +FQE+D L+ E
Sbjct: 681 EERLREQQEI---ELQKKRQEEETFLRVQEELQRLKELNNNEKAEKFQIFQELDQLQKEK 737
Query: 130 DE 131
DE
Sbjct: 738 DE 739
Score = 26.9 bits (58), Expect = 6.1
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 17/138 (12%)
Query: 11 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEK-QLFHGTPVTIENFLNWKAKFDAELLEI 69
+Q+K E ++ + E ++ ++ E+AEK Q+F ++ K + A+L E+
Sbjct: 692 LQKKRQEEETFLRVQEELQRLKELNNNEKAEKFQIFQ----ELDQLQKEKDEQYAKL-EL 746
Query: 70 KKKRMKEEEQAG-------KNKLSGKQLFETDHNLDTSDIQFLEDAGNNVE-VDESLFQE 121
+KKR++E+E+ + +L KQ E L ++Q++E+ ++E + ESL +
Sbjct: 747 EKKRLEEQEKEQVMLVAHLEEQLREKQ--EMIQLLRRGEVQWVEEEKRDLEGIRESLLR- 803
Query: 122 MDDLELEDDEDDPDYNPA 139
+ + DED + A
Sbjct: 804 VKEARAGGDEDGEELEKA 821
>gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo
sapiens]
Length = 1150
Score = 38.5 bits (88), Expect = 0.002
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 18/121 (14%)
Query: 27 EEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEEQAGKNKLS 86
+E+KK+K+K++++ E++ + K + D E E K KR K + K +
Sbjct: 796 KEDKKEKDKKSKKDERK-------------DKKEERDDETDEPKPKRRKSGDDKDKKEDR 842
Query: 87 GKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLELEDDEDDPDYNPADPESDSA 146
++ E D+ D E+ N E D M+ E ED+EDD D D
Sbjct: 843 DERKKEDKRKDDSKDDDETEEDNNQDEYDP-----MEAEEAEDEEDDRDEEEMTKRDDKR 897
Query: 147 D 147
D
Sbjct: 898 D 898
Score = 30.4 bits (67), Expect = 0.55
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 15/124 (12%)
Query: 21 QIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEEQA 80
Q+ + + E+K+ + E +E EK G I +W +K D + +++ R + E +A
Sbjct: 596 QLVEKLQGERKEADGEQDEEEKD--DGEAKEISTPTHW-SKLDPKTMKVNDLRKELESRA 652
Query: 81 GKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLELEDDEDDPDYNPAD 140
+K QL T ++ E E+++S E E+DEDD + D
Sbjct: 653 LSSKGLKSQLIARL----TKQLKVEEQKEEQKELEKS--------EKEEDEDDDRKSEDD 700
Query: 141 PESD 144
E +
Sbjct: 701 KEEE 704
>gi|32967605 bromodomain adjacent to zinc finger domain, 1A isoform
b [Homo sapiens]
Length = 1524
Score = 38.5 bits (88), Expect = 0.002
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 21/121 (17%)
Query: 18 IVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEE 77
I D + R+ +++ +E +AE+ K+ + + A + + K++++KE+
Sbjct: 602 IEDYVDILRQAKQEFRELKAEQHRKE---------------REEAAARIRKRKEEKLKEQ 646
Query: 78 EQAGKNKLSGKQLFETDHNLDTSDIQF----LEDAGNNVEVDESLFQEMDDLELEDDEDD 133
EQ K K ++L E + T+DI ED ++E ++ +E+D + +DEDD
Sbjct: 647 EQKMKEKQ--EKLKEDEQRNSTADISIGEEEREDFDTSIESKDTEQKELDQDMVTEDEDD 704
Query: 134 P 134
P
Sbjct: 705 P 705
Score = 29.6 bits (65), Expect = 0.95
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 12 QEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNW-KAKFDAELLEIK 70
+E+L +IV++ + +++EEK++ + E E+ ++L +E W K + D E ++K
Sbjct: 349 REELKKIVEEERLKKKEEKERLKVEREKEREKLREEKRKYVEYLKQWSKPREDMECDDLK 408
Query: 71 K 71
+
Sbjct: 409 E 409
Score = 27.3 bits (59), Expect = 4.7
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 21 QIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEEQA 80
++K + + + K+KE E+ EK+ + E L K + + +E +K+R K E+
Sbjct: 326 KLKREKADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVEREKEREKLREEK 385
Query: 81 GKNKLSGKQLFETDHNLDTSDIQFLED 107
K KQ + +++ D++ L +
Sbjct: 386 RKYVEYLKQWSKPREDMECDDLKELPE 412
>gi|32967603 bromodomain adjacent to zinc finger domain, 1A isoform
a [Homo sapiens]
Length = 1556
Score = 38.5 bits (88), Expect = 0.002
Identities = 30/121 (24%), Positives = 60/121 (49%), Gaps = 21/121 (17%)
Query: 18 IVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEE 77
I D + R+ +++ +E +AE+ K+ + + A + + K++++KE+
Sbjct: 634 IEDYVDILRQAKQEFRELKAEQHRKE---------------REEAAARIRKRKEEKLKEQ 678
Query: 78 EQAGKNKLSGKQLFETDHNLDTSDIQF----LEDAGNNVEVDESLFQEMDDLELEDDEDD 133
EQ K K ++L E + T+DI ED ++E ++ +E+D + +DEDD
Sbjct: 679 EQKMKEKQ--EKLKEDEQRNSTADISIGEEEREDFDTSIESKDTEQKELDQDMVTEDEDD 736
Query: 134 P 134
P
Sbjct: 737 P 737
Score = 29.6 bits (65), Expect = 0.95
Identities = 16/61 (26%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 12 QEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNW-KAKFDAELLEIK 70
+E+L +IV++ + +++EEK++ + E E+ ++L +E W K + D E ++K
Sbjct: 349 REELKKIVEEERLKKKEEKERLKVEREKEREKLREEKRKYVEYLKQWSKPREDMECDDLK 408
Query: 71 K 71
+
Sbjct: 409 E 409
Score = 27.3 bits (59), Expect = 4.7
Identities = 20/87 (22%), Positives = 42/87 (48%)
Query: 21 QIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEEQA 80
++K + + + K+KE E+ EK+ + E L K + + +E +K+R K E+
Sbjct: 326 KLKREKADALEAKKKEKEDKEKKREELKKIVEEERLKKKEEKERLKVEREKEREKLREEK 385
Query: 81 GKNKLSGKQLFETDHNLDTSDIQFLED 107
K KQ + +++ D++ L +
Sbjct: 386 RKYVEYLKQWSKPREDMECDDLKELPE 412
>gi|169161522 PREDICTED: similar to cell division cycle 2-like 1
(PITSLRE proteins) [Homo sapiens]
Length = 155
Score = 37.7 bits (86), Expect = 0.003
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 57 NWKAKFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDE 116
+WK K E+L+ KK+R ++EE+A +L K + D D+ + L D + +
Sbjct: 7 SWKVKTLDEILQEKKRRKEQEEKAEIKRL--KNSDDRDSKRDSLEEGELRDHRMEITIRN 64
Query: 117 SLFQEMDDLELEDDEDD 133
S ++ D +E +EDD
Sbjct: 65 SPYRREDSMEDRGEEDD 81
>gi|38569484 kinesin family member 21A [Homo sapiens]
Length = 1661
Score = 37.7 bits (86), Expect = 0.003
Identities = 36/133 (27%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 22 IKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKK---RMKEEE 78
+++ E +K A F G+ L+ K E++++ KK ++K +E
Sbjct: 494 LESEAVNENLRKNLTRATARAPYFSGSSTFSPTILS-SDKETIEIIDLAKKDLEKLKRKE 552
Query: 79 QAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNN-VEVDESLFQEMDDLE-----LEDDED 132
+ K ++GK+ TD + + + + + + NN +EV+ES QE+ D E E++ED
Sbjct: 553 KRKKKSVAGKE-DNTDTDQEKKEEKGVSERENNELEVEES--QEVSDHEDEEEEEEEEED 609
Query: 133 DPDYNPADPESDS 145
D D + ESDS
Sbjct: 610 DIDGGESSDESDS 622
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 37.7 bits (86), Expect = 0.003
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 57 NWKAKFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDE 116
+WK K E+L+ KK+R ++EE+A +L K + D D+ + L D + +
Sbjct: 7 SWKVKTLDEILQEKKRRKEQEEKAEIKRL--KNSDDRDSKRDSLEEGELRDHRMEITIRN 64
Query: 117 SLFQEMDDLELEDDEDD 133
S ++ D +E +EDD
Sbjct: 65 SPYRREDSMEDRGEEDD 81
Score = 27.3 bits (59), Expect = 4.7
Identities = 27/145 (18%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 11 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGT-------PVTIENFLNWKAKFD 63
++E+ E +Q + R E+++KE+EA E H T V ++ +
Sbjct: 181 MREQQKEQREQKERERRAEERRKEREARR-EVSAHHRTMREDYSDKVKASHWSRSPPRPP 239
Query: 64 AELLEI--KKKRMKEEEQAGKNKLSGKQ-LFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
E E+ +K +KEE+ ++ LS Q + +++ +++ E + E +E +
Sbjct: 240 RERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 299
Query: 121 EMDDLELEDDEDDPDYNPADPESDS 145
E ++ ++ ++ + + E ++
Sbjct: 300 EEEEGSTSEESEEEEEEEEEEEEET 324
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 37.4 bits (85), Expect = 0.005
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 57 NWKAKFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDE 116
+WK K E+L+ KK+R ++EE+A +L K + D D+ + L D + +
Sbjct: 7 SWKVKTLDEILQEKKRRKEQEEKAEIKRL--KNSDDRDSKRDSLEEGELRDHCMEITIRN 64
Query: 117 SLFQEMDDLELEDDEDD 133
S ++ D +E +EDD
Sbjct: 65 SPYRREDSMEDRGEEDD 81
Score = 27.3 bits (59), Expect = 4.7
Identities = 27/145 (18%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 11 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGT-------PVTIENFLNWKAKFD 63
++E+ E +Q + R E+++KE+EA E H T V ++ +
Sbjct: 169 MREQQKEQREQKERERRAEERRKEREARR-EVSAHHRTMREDYSDKVKASHWSRSPPRPP 227
Query: 64 AELLEI--KKKRMKEEEQAGKNKLSGKQ-LFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
E E+ +K +KEE+ ++ LS Q + +++ +++ E + E +E +
Sbjct: 228 RERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 287
Query: 121 EMDDLELEDDEDDPDYNPADPESDS 145
E ++ ++ ++ + + E ++
Sbjct: 288 EEEEGSTSEESEEEEEEEEEEEEET 312
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 37.4 bits (85), Expect = 0.005
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 57 NWKAKFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDE 116
+WK K E+L+ KK+R ++EE+A +L K + D D+ + L D + +
Sbjct: 7 SWKVKTLDEILQEKKRRKEQEEKAEIKRL--KNSDDRDSKRDSLEEGELRDHCMEITIRN 64
Query: 117 SLFQEMDDLELEDDEDD 133
S ++ D +E +EDD
Sbjct: 65 SPYRREDSMEDRGEEDD 81
Score = 27.3 bits (59), Expect = 4.7
Identities = 27/145 (18%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 11 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGT-------PVTIENFLNWKAKFD 63
++E+ E +Q + R E+++KE+EA E H T V ++ +
Sbjct: 179 MREQQKEQREQKERERRAEERRKEREARR-EVSAHHRTMREDYSDKVKASHWSRSPPRPP 237
Query: 64 AELLEI--KKKRMKEEEQAGKNKLSGKQ-LFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
E E+ +K +KEE+ ++ LS Q + +++ +++ E + E +E +
Sbjct: 238 RERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 297
Query: 121 EMDDLELEDDEDDPDYNPADPESDS 145
E ++ ++ ++ + + E ++
Sbjct: 298 EEEEGSTSEESEEEEEEEEEEEEET 322
>gi|239747195 PREDICTED: similar to PITSLRE protein kinase beta SV2
[Homo sapiens]
Length = 153
Score = 37.4 bits (85), Expect = 0.005
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 57 NWKAKFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDE 116
+WK K E+L+ KK+R ++EE+A +L K + D D+ + L D + +
Sbjct: 7 SWKVKTLDEILQEKKRRKEQEEKAEIKRL--KNSDDRDSKRDSLEEGELRDHCMEITIRN 64
Query: 117 SLFQEMDDLELEDDEDD 133
S ++ D +E +EDD
Sbjct: 65 SPYRREDSMEDRGEEDD 81
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 37.4 bits (85), Expect = 0.005
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 57 NWKAKFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDE 116
+WK K E+L+ KK+R ++EE+A +L K + D D+ + L D + +
Sbjct: 7 SWKVKTLDEILQEKKRRKEQEEKAEIKRL--KNSDDRDSKRDSLEEGELRDHCMEITIRN 64
Query: 117 SLFQEMDDLELEDDEDD 133
S ++ D +E +EDD
Sbjct: 65 SPYRREDSMEDRGEEDD 81
Score = 27.3 bits (59), Expect = 4.7
Identities = 27/145 (18%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 11 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGT-------PVTIENFLNWKAKFD 63
++E+ E +Q + R E+++KE+EA E H T V ++ +
Sbjct: 170 MREQQKEQREQKERERRAEERRKEREARR-EVSAHHRTMREDYSDKVKASHWSRSPPRPP 228
Query: 64 AELLEI--KKKRMKEEEQAGKNKLSGKQ-LFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
E E+ +K +KEE+ ++ LS Q + +++ +++ E + E +E +
Sbjct: 229 RERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 288
Query: 121 EMDDLELEDDEDDPDYNPADPESDS 145
E ++ ++ ++ + + E ++
Sbjct: 289 EEEEGSTSEESEEEEEEEEEEEEET 313
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 37.4 bits (85), Expect = 0.005
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 57 NWKAKFDAELLEIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDE 116
+WK K E+L+ KK+R ++EE+A +L K + D D+ + L D + +
Sbjct: 7 SWKVKTLDEILQEKKRRKEQEEKAEIKRL--KNSDDRDSKRDSLEEGELRDHCMEITIRN 64
Query: 117 SLFQEMDDLELEDDEDD 133
S ++ D +E +EDD
Sbjct: 65 SPYRREDSMEDRGEEDD 81
Score = 27.3 bits (59), Expect = 4.7
Identities = 27/145 (18%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 11 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGT-------PVTIENFLNWKAKFD 63
++E+ E +Q + R E+++KE+EA E H T V ++ +
Sbjct: 179 MREQQKEQREQKERERRAEERRKEREARR-EVSAHHRTMREDYSDKVKASHWSRSPPRPP 237
Query: 64 AELLEI--KKKRMKEEEQAGKNKLSGKQ-LFETDHNLDTSDIQFLEDAGNNVEVDESLFQ 120
E E+ +K +KEE+ ++ LS Q + +++ +++ E + E +E +
Sbjct: 238 RERFELGDGRKPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEE 297
Query: 121 EMDDLELEDDEDDPDYNPADPESDS 145
E ++ ++ ++ + + E ++
Sbjct: 298 EEEEGSTSEESEEEEEEEEEEEEET 322
>gi|66792814 retrotransposon gag domain containing 4 [Homo sapiens]
Length = 569
Score = 37.4 bits (85), Expect = 0.005
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 26/121 (21%)
Query: 20 DQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEEQ 79
DQ K R +++ KEKE EE +K E + K + + E E K++ +EEE
Sbjct: 361 DQRKRMRAFQQEMKEKEEEEMKK----------EEEMKKKEEKEEEEEEEMKQKEEEEEI 410
Query: 80 AGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVD-------ESLFQEMDDLELEDDED 132
KN+ G+ E D + ED G E + E + E+++ L++ +D
Sbjct: 411 RNKNEEEGESKDEEDED---------EDGGQKPEGEPQQDPGTEETYGEVEEEPLDEAQD 461
Query: 133 D 133
D
Sbjct: 462 D 462
>gi|8922712 septin 11 [Homo sapiens]
Length = 429
Score = 37.0 bits (84), Expect = 0.006
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 12/96 (12%)
Query: 5 FTLVTAVQEKLNEIVDQIKTRREEEK-------KQKEKEAEEAEKQLFHGTPVTIENFLN 57
F+L + K NE + +++ + EE + K+KE E +EAEK+L +
Sbjct: 317 FSLQETYEAKRNEFLGELQKKEEEMRQMFVMRVKEKEAELKEAEKELHEKFDLLKRTHQE 376
Query: 58 WKAKFDAELLEIKKKRMKEEEQAGKNKLSGKQLFET 93
K K +E KKK ++EE + K + QL ++
Sbjct: 377 EKKK-----VEDKKKELEEEVNNFQKKKAAAQLLQS 407
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 36.6 bits (83), Expect = 0.008
Identities = 25/122 (20%), Positives = 62/122 (50%), Gaps = 12/122 (9%)
Query: 11 VQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIK 70
++EK + +Q K ++EEK ++EK+ +E EK+ + E E + +
Sbjct: 516 LREKEERMREQKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREE----------ERMRER 565
Query: 71 KKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLELEDD 130
+K+M+EEE+ + + +++ E + + + + E E +E ++++ + + +++
Sbjct: 566 EKKMREEEEMMREQ--EEKMQEQEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEE 623
Query: 131 ED 132
ED
Sbjct: 624 ED 625
Score = 30.4 bits (67), Expect = 0.55
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 19/86 (22%)
Query: 12 QEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKK 71
Q+KL E +Q++ + E+ +Q+EK E+ EK W+ + E L ++
Sbjct: 302 QKKLREQEEQMQEQEEKMWEQEEKMREQEEKM--------------WRQE---ERLWEQE 344
Query: 72 KRMKEEEQAGKNKLSGKQLFETDHNL 97
K+M+E+EQ K + ++++E D L
Sbjct: 345 KQMREQEQ--KMRDQEERMWEQDERL 368
Score = 29.6 bits (65), Expect = 0.95
Identities = 22/105 (20%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 25 RREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEE----QA 80
R+EEE +++EK+ + E++++ E K + E + ++KR++E+E +
Sbjct: 238 RQEEELREQEKKIRKQEEKMWRQEERLREQ--EGKMREQEEKMRRQEKRLREQEKELREQ 295
Query: 81 GKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDL 125
K K+L E + + + + E E +E ++++ + L
Sbjct: 296 EKELREQKKLREQEEQMQEQEEKMWEQEEKMREQEEKMWRQEERL 340
Score = 28.1 bits (61), Expect = 2.8
Identities = 23/121 (19%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 12 QEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKK 71
QEK+ E DQ+ + E+ + Q++K ++ E+ + + + E + +K
Sbjct: 478 QEKMREQEDQMWEQEEKMRDQEQKMWDQEERMWEQ----------DERLREKEERMREQK 527
Query: 72 KRMKEEEQAGKNKLSGKQLFET-DHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLELEDD 130
K ++EE+ + K + +Q +T D + + + + + +E + +E ++ E +
Sbjct: 528 KMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQE 587
Query: 131 E 131
E
Sbjct: 588 E 588
Score = 26.9 bits (58), Expect = 6.1
Identities = 22/109 (20%), Positives = 55/109 (50%), Gaps = 13/109 (11%)
Query: 23 KTRREEEK-KQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEEQAG 81
K RR+E++ +++EKE E EK+L K + E ++ ++++M E+E+
Sbjct: 277 KMRRQEKRLREQEKELREQEKELRE----------QKKLREQEEQMQEQEEKMWEQEE-- 324
Query: 82 KNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLELEDD 130
K + ++++ + L + Q E + +E ++++ + L +++
Sbjct: 325 KMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEE 373
Score = 26.6 bits (57), Expect = 8.0
Identities = 17/69 (24%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 12 QEKLNEIVDQIKTRREEEKK-QKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIK 70
+EK+ E + K R +EEK ++E++ +E E++++ E K + E++ +
Sbjct: 580 EEKMQE--QEEKMREQEEKMWEQEEKMQEQEEKMWEQEEKMWEQEEEDKMQEQEEMMWEQ 637
Query: 71 KKRMKEEEQ 79
+++M+E+E+
Sbjct: 638 EEKMQEQEE 646
>gi|195976782 Paf1/RNA polymerase II complex component [Homo
sapiens]
Length = 710
Score = 36.6 bits (83), Expect = 0.008
Identities = 39/133 (29%), Positives = 67/133 (50%), Gaps = 14/133 (10%)
Query: 17 EIVDQIKTRREEEKKQKEKEAEEAEKQ----LFHGTPVTIENFLNWKAKFDAELLEIKKK 72
EI ++KT +++EKK+K+K+ EE +++ + VT N ++K D E L+ K +
Sbjct: 223 EIKKKLKTAKKKEKKEKKKKQEEEQEKKKLTQIQESQVTSHN-KERRSKRD-EKLDKKSQ 280
Query: 73 RMKE---EEQAGKNK----LSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDL 125
M+E E + KN+ L+ KQ +T + + D + ED ++ + D S D
Sbjct: 281 AMEELKAEREKRKNRTAELLAKKQPLKTS-EVYSDDEEEEEDDKSSEKSDRSSRTSSSDE 339
Query: 126 ELEDDEDDPDYNP 138
E E +E P P
Sbjct: 340 EEEKEEIPPKSQP 352
>gi|21361478 septin 6 isoform B [Homo sapiens]
Length = 434
Score = 36.2 bits (82), Expect = 0.010
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 5 FTLVTAVQEKLNEIVDQIKTRREEEK-------KQKEKEAEEAEKQLFHGTPVTIENFLN 57
F+L + K NE + +++ + EE + K+KE E +EAEK+L E F
Sbjct: 318 FSLQETYEAKRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELH-------EKFDR 370
Query: 58 WKA--KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFET 93
K + + + LE KKK + +E A K + + +L ++
Sbjct: 371 LKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQS 408
>gi|22035581 septin 6 isoform D [Homo sapiens]
Length = 429
Score = 36.2 bits (82), Expect = 0.010
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 5 FTLVTAVQEKLNEIVDQIKTRREEEK-------KQKEKEAEEAEKQLFHGTPVTIENFLN 57
F+L + K NE + +++ + EE + K+KE E +EAEK+L E F
Sbjct: 318 FSLQETYEAKRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELH-------EKFDR 370
Query: 58 WKA--KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFET 93
K + + + LE KKK + +E A K + + +L ++
Sbjct: 371 LKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQS 408
>gi|22035579 septin 6 isoform A [Homo sapiens]
Length = 427
Score = 36.2 bits (82), Expect = 0.010
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 5 FTLVTAVQEKLNEIVDQIKTRREEEK-------KQKEKEAEEAEKQLFHGTPVTIENFLN 57
F+L + K NE + +++ + EE + K+KE E +EAEK+L E F
Sbjct: 318 FSLQETYEAKRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELH-------EKFDR 370
Query: 58 WKA--KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFET 93
K + + + LE KKK + +E A K + + +L ++
Sbjct: 371 LKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQS 408
>gi|46276863 parathymosin [Homo sapiens]
Length = 102
Score = 36.2 bits (82), Expect = 0.010
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 68 EIKKKRMKEEEQAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESLFQEMDDLEL 127
++K+K+ K EE+A + + + + E ++ + + + ED E DE +E D+ E
Sbjct: 16 DLKEKKEKVEEKASRKERKKEVVEEEENGAEEEEEETAEDGE---EEDEG--EEEDEEEE 70
Query: 128 EDDEDDPDYNPADPESDSAD 147
E+D++ P A E D AD
Sbjct: 71 EEDDEGPALKRAAEEEDEAD 90
>gi|8922633 high-mobility group 20A [Homo sapiens]
Length = 347
Score = 36.2 bits (82), Expect = 0.010
Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 23 KTRREEEKKQK----EKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEE 78
K+ R++ +Q EKE E E+ +F P+ E FLN +AEL +++K M+ EE
Sbjct: 190 KSHRQDAARQATHDHEKETEVKERSVFD-IPIFTEEFLNHSKAREAELRQLRKSNMEFEE 248
Query: 79 QAGKNKLSGKQLFETDHNLDTSDIQFLEDAGNNVEVDESL 118
+N K + ++ ++ +++ N + + L
Sbjct: 249 ---RNAALQKHVESMRTAVEKLEVDVIQERSRNTVLQQHL 285
>gi|22035577 septin 6 isoform A [Homo sapiens]
Length = 427
Score = 36.2 bits (82), Expect = 0.010
Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 16/98 (16%)
Query: 5 FTLVTAVQEKLNEIVDQIKTRREEEK-------KQKEKEAEEAEKQLFHGTPVTIENFLN 57
F+L + K NE + +++ + EE + K+KE E +EAEK+L E F
Sbjct: 318 FSLQETYEAKRNEFLGELQKKEEEMRQMFVQRVKEKEAELKEAEKELH-------EKFDR 370
Query: 58 WKA--KFDAELLEIKKKRMKEEEQAGKNKLSGKQLFET 93
K + + + LE KKK + +E A K + + +L ++
Sbjct: 371 LKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQS 408
>gi|50513245 chromatin assembly factor 1, subunit A (p150) [Homo
sapiens]
Length = 956
Score = 36.2 bits (82), Expect = 0.010
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
Query: 10 AVQEKLNEIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEI 69
A +E+ ++ ++ K +EE KK+KE+E E EK+ K AE +
Sbjct: 352 AEREEKEKLKEEAKRAKEEAKKKKEEEKELKEKER--------REKREKDEKEKAEKQRL 403
Query: 70 KKKRMKEEEQAGKNKLSGKQLFETDHNL 97
K++R KE ++A + KL K+ E + L
Sbjct: 404 KEERRKERQEALEAKLEEKRKKEEEKRL 431
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 35.8 bits (81), Expect = 0.013
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 4/134 (2%)
Query: 17 EIVDQIKTRREEEKKQKEKEAEEAEKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKE 76
E V +IK + E E + KE + EE E+ + IE+ + K L K
Sbjct: 421 ENVKEIKVKEENETEIKEIKMEE-ERNIIPREEKPIEDEIERKENIKPSLGSKKNLLESI 479
Query: 77 EEQAGKNKLSGKQLFETDHNLDTSD---IQFLEDAGNNVEVDESLFQEMDDLELEDDEDD 133
+ + K + E + NLD D + E VE +E + D+ E+DEDD
Sbjct: 480 PTHSDQEKEVNIKKPEDNENLDDKDDDTTRVDESLNIKVEAEEEKAKSGDETNKEEDEDD 539
Query: 134 PDYNPADPESDSAD 147
+ + E + +
Sbjct: 540 EEAEEEEEEEEEEE 553
Score = 26.6 bits (57), Expect = 8.0
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 5/82 (6%)
Query: 21 QIKTRREEEKKQKEKEAEEA-EKQLFHGTPVTIENFLNWKAKFDAELLEIKKKRMKEEEQ 79
+ + EEE +KEKE + E++ P ENFL KF +E + + +
Sbjct: 277 EAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKF----MEDRGTPINKRPV 332
Query: 80 AGKNKLSGKQLFETDHNLDTSD 101
G L+ +LF H L D
Sbjct: 333 LGYRNLNLFKLFRLVHKLGGFD 354
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.128 0.341
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,688,848
Number of Sequences: 37866
Number of extensions: 269728
Number of successful extensions: 4317
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 354
Number of HSP's that attempted gapping in prelim test: 2803
Number of HSP's gapped (non-prelim): 1445
length of query: 147
length of database: 18,247,518
effective HSP length: 93
effective length of query: 54
effective length of database: 14,725,980
effective search space: 795202920
effective search space used: 795202920
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.