Guide to the Human Genome
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Name: TMEM31 Sequence: fasta or formatted (168aa) NCBI GI: 55770866
Description:

transmembrane protein 31

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2          7           1
 C cysteine            1.2          2           1
 D aspartate           2.4          4           1
 E glutamate           8.3         14           3
 F phenylalanine       8.9         15           2
 G glycine             1.2          2           1
 H histidine           2.4          4           1
 I isoleucine          7.7         13           2
 K lysine              3.6          6           1
 L leucine            16.7         28           5
 M methionine          1.2          2           1
 N asparagine          3.6          6           2
 P proline             7.7         13           1
 Q glutamine           6.0         10           2
 R arginine            6.0         10           2
 S serine              6.5         11           2
 T threonine           6.5         11           2
 V valine              2.4          4           1
 W tryptophan          1.2          2           1
 Y tyrosine            2.4          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transmembrane protein 31 
PNMAL2                0.025   PNMA-like 2 
LOC100133264          0.025   PREDICTED: hypothetical protein 
LOC100133264          0.025   PREDICTED: hypothetical protein 
CTR9                  0.022   SH2 domain binding protein 1 
PDS5B                 0.022   PDS5, regulator of cohesion maintenance, homolog B [H...
PPP1R12A              0.019   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.019   protein phosphatase 1, regulatory (inhibitor) subun...
PPP1R12A              0.019   protein phosphatase 1, regulatory (inhibitor) subunit...
SLC44A3               0.019   solute carrier family 44, member 3 isoform 1 
SLC44A3               0.019   solute carrier family 44, member 3 isoform 2 
XRCC1                 0.016   X-ray repair cross complementing protein 1 
NBPF20                0.016   hypothetical protein LOC400818 
LOC100288635          0.016   PREDICTED: hypothetical protein 
LOC100288635          0.016   PREDICTED: hypothetical protein XP_002343184 
SFRS2IP               0.016   splicing factor, arginine/serine-rich 2, interactin...
ATXN1                 0.013   ataxin 1 
ATXN1                 0.013   ataxin 1 
SCN7A                 0.013   sodium channel, voltage-gated, type VII, alpha [Hom...
NBPF10                0.010   hypothetical protein LOC100132406 
MAML2                 0.010   mastermind-like 2 
TCHH                  0.010   trichohyalin 
THAP11                0.010   THAP domain containing 11 
SPATA13               0.010   spermatogenesis associated 13 
PRKRIR                0.010   protein-kinase, interferon-inducible double stranded...
MYST4                 0.010   MYST histone acetyltransferase (monocytic leukemia)...
NBPF14                0.010   hypothetical protein LOC25832 
NBPF15                0.010   hypothetical protein LOC284565 
SGK269                0.010   NKF3 kinase family member 
NBPF16                0.010   hypothetical protein LOC728936 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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