Guide to the Human Genome
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Name: SLC44A3 Sequence: fasta or formatted (653aa) NCBI GI: 166235173
Description:

solute carrier family 44, member 3 isoform 1

Referenced in:

Acetylcholine
Solute Carrier Families

Other entries for this name:
alt prot [605aa] solute carrier family 44, member 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         44           2
 C cysteine            3.7         24           2
 D aspartate           3.4         22           1
 E glutamate           3.8         25           2
 F phenylalanine       8.4         55           2
 G glycine             5.7         37           2
 H histidine           2.0         13           1
 I isoleucine          5.7         37           2
 K lysine              3.8         25           2
 L leucine            13.3         87           3
 M methionine          2.6         17           2
 N asparagine          4.4         29           2
 P proline             3.4         22           2
 Q glutamine           3.5         23           2
 R arginine            3.8         25           1
 S serine              7.5         49           2
 T threonine           5.4         35           3
 V valine              7.5         49           2
 W tryptophan          1.8         12           2
 Y tyrosine            3.5         23           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   solute carrier family 44, member 3 isoform 1 
SLC44A3               0.919   solute carrier family 44, member 3 isoform 2 
SLC44A1               0.468   CDW92 antigen 
SLC44A2               0.156   solute carrier family 44, member 2 isoform 2 
SLC44A2               0.156   solute carrier family 44, member 2 isoform 1 
SLC44A5               0.153   solute carrier family 44, member 5 isoform B 
SLC44A5               0.153   solute carrier family 44, member 5 isoform A 
SLC44A4               0.148   choline transporter-like protein 4 
VN1R1                 0.005   vomeronasal 1 receptor 1 
NPY5R                 0.005   neuropeptide Y receptor Y5 
LRRC4                 0.005   leucine rich repeat containing 4 
TMEM31                0.005   transmembrane protein 31 
GRIN3A                0.004   glutamate receptor, ionotropic, N-methyl-D-aspartat...
ABCC4                 0.004   ATP-binding cassette, sub-family C, member 4 isofor...
MARCH6                0.004   membrane-associated ring finger (C3HC4) 6 
CALHM3                0.004   calcium homeostasis modulator 3 
CCR2                  0.004   chemokine (C-C motif) receptor 2 isoform B 
CCR2                  0.004   chemokine (C-C motif) receptor 2 isoform A 
CCR3                  0.004   CC chemokine receptor 3 
CCR3                  0.004   CC chemokine receptor 3 
CCRL2                 0.004   chemokine (C-C motif) receptor-like 2 isoform 2 [Ho...
CCRL2                 0.004   chemokine (C-C motif) receptor-like 2 isoform 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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