Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5453922
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5453922 prepronociceptin [Homo sapiens]
(176 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5453922 prepronociceptin [Homo sapiens] 357 2e-99
gi|208879446 proenkephalin [Homo sapiens] 59 2e-09
gi|5453876 proenkephalin [Homo sapiens] 59 2e-09
gi|13270473 beta-neoendorphin-dynorphin preproprotein [Homo sapi... 35 0.044
gi|55741677 SET domain containing 1A [Homo sapiens] 33 0.17
gi|44890059 involucrin [Homo sapiens] 31 0.63
gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens] 30 0.83
gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens] 30 0.83
gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens] 30 0.83
gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens] 30 0.83
gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens] 30 0.83
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens] 30 0.83
gi|110347427 ubiquitin specific protease 34 [Homo sapiens] 30 1.1
gi|93141033 PAX interacting protein 1 [Homo sapiens] 30 1.4
gi|38524614 zinc finger protein 773 [Homo sapiens] 29 1.8
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap... 29 2.4
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap... 29 2.4
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap... 29 2.4
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi... 29 2.4
gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens] 29 2.4
gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens] 29 2.4
gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens] 29 2.4
gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens] 29 2.4
gi|23510448 minichromosome maintenance complex component 5 [Homo... 28 3.1
gi|239753937 PREDICTED: similar to hCG2036828 [Homo sapiens] 28 3.1
gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapi... 28 3.1
gi|207452735 epiplakin 1 [Homo sapiens] 28 3.1
gi|53729339 mitochondrial translational initiation factor 2 prec... 28 3.1
gi|53729337 mitochondrial translational initiation factor 2 prec... 28 3.1
gi|119220598 apolipoprotein B48 receptor [Homo sapiens] 28 3.1
>gi|5453922 prepronociceptin [Homo sapiens]
Length = 176
Score = 357 bits (917), Expect = 2e-99
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MKVLLCDLLLLSLFSSVFSSCQRDCLTCQEKLHPALDSFDLEVCILECEEKVFPSPLWTP 60
MKVLLCDLLLLSLFSSVFSSCQRDCLTCQEKLHPALDSFDLEVCILECEEKVFPSPLWTP
Sbjct: 1 MKVLLCDLLLLSLFSSVFSSCQRDCLTCQEKLHPALDSFDLEVCILECEEKVFPSPLWTP 60
Query: 61 CTKVMARSSWQLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGE 120
CTKVMARSSWQLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGE
Sbjct: 61 CTKVMARSSWQLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGE 120
Query: 121 MEQKQLQKRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRRRTLHQNGNV 176
MEQKQLQKRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRRRTLHQNGNV
Sbjct: 121 MEQKQLQKRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRRRTLHQNGNV 176
>gi|208879446 proenkephalin [Homo sapiens]
Length = 267
Score = 58.9 bits (141), Expect = 2e-09
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 5 LCDLLLL---SLFSSVFSSCQRDCLTCQEKLHPALDSFDLEVCILECEEKVFPSPLWTPC 61
LC LLL L ++V + C +DC TC +L D + C++ECE K+ +W C
Sbjct: 7 LCTWLLLLGPGLLATVRAECSQDCATCSYRLVRPAD-INFLACVMECEGKLPSLKIWETC 65
Query: 62 TKVMARSSWQLSPAAPEHVAAALYQPRASEMQHLRR------MPRVRSLFQEQEEPEPGM 115
+++ S P P+ + L + E HL M R ++ +E P
Sbjct: 66 KELLQLS----KPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPME 121
Query: 116 EEAGEMEQKQLQKRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRRRTLHQNGN 175
E + L KR+GGF +K A + + S+ +++ L R R+ HQ+G+
Sbjct: 122 PEEEANGSEILAKRYGGF--MKKDAEEDDSLANSSDLLKELL---ETGDNRERSHHQDGS 176
>gi|5453876 proenkephalin [Homo sapiens]
Length = 267
Score = 58.9 bits (141), Expect = 2e-09
Identities = 48/180 (26%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 5 LCDLLLL---SLFSSVFSSCQRDCLTCQEKLHPALDSFDLEVCILECEEKVFPSPLWTPC 61
LC LLL L ++V + C +DC TC +L D + C++ECE K+ +W C
Sbjct: 7 LCTWLLLLGPGLLATVRAECSQDCATCSYRLVRPAD-INFLACVMECEGKLPSLKIWETC 65
Query: 62 TKVMARSSWQLSPAAPEHVAAALYQPRASEMQHLRR------MPRVRSLFQEQEEPEPGM 115
+++ S P P+ + L + E HL M R ++ +E P
Sbjct: 66 KELLQLS----KPELPQDGTSTLRENSKPEESHLLAKRYGGFMKRYGGFMKKMDELYPME 121
Query: 116 EEAGEMEQKQLQKRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRRRTLHQNGN 175
E + L KR+GGF +K A + + S+ +++ L R R+ HQ+G+
Sbjct: 122 PEEEANGSEILAKRYGGF--MKKDAEEDDSLANSSDLLKELL---ETGDNRERSHHQDGS 176
>gi|13270473 beta-neoendorphin-dynorphin preproprotein [Homo
sapiens]
Length = 254
Score = 34.7 bits (78), Expect = 0.044
Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Query: 71 QLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQKQLQKRF 130
QL+ A E LY + ++R + ++ G + M + L KR+
Sbjct: 150 QLNDGAME--TGTLYLAEEDPKEQVKRYGGFLRKYPKRSSEVAGEGDGDSMGHEDLYKRY 207
Query: 131 GGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQ 165
GGF + K NQKR+ F+R+ + +S +
Sbjct: 208 GGFLRRIRPKLKWDNQKRYGGFLRRQFKVVTRSQE 242
Score = 32.3 bits (72), Expect = 0.22
Identities = 14/56 (25%), Positives = 23/56 (41%)
Query: 11 LSLFSSVFSSCQRDCLTCQEKLHPALDSFDLEVCILECEEKVFPSPLWTPCTKVMA 66
L +F S + C C C K + +C L+C+ + PS W C ++
Sbjct: 12 LLMFPSTTADCLSRCSLCAVKTQDGPKPINPLICSLQCQAALLPSEEWERCQSFLS 67
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 32.7 bits (73), Expect = 0.17
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 21/128 (16%)
Query: 30 EKLHPALDSFDLEVCILECEEKVFPSPLWTPCTKVMARSSWQLSPA-----APEHVAAAL 84
E+ P L LE + P+P P V A ++ SPA APE V A
Sbjct: 1287 ERPRPLLSHILLEHNYALAVKPTPPAPALRPPEPVPAPAALFSSPADEVLEAPEVVVAEA 1346
Query: 85 YQPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQKQLQKRFGGFTG----ARKSA 140
+P+ ++Q Q++EE E EE GE E+++ G R+S
Sbjct: 1347 EEPKPQQLQ------------QQREEGEEEGEEEGEEEEEESSDSSSSSDGEGALRRRSL 1394
Query: 141 RKLANQKR 148
R A ++R
Sbjct: 1395 RSHARRRR 1402
>gi|44890059 involucrin [Homo sapiens]
Length = 585
Score = 30.8 bits (68), Expect = 0.63
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 17/127 (13%)
Query: 49 EEKVFPSPLWTPCTKVMARSSWQLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSL---- 104
E+ P+PL PC KV ++ E A+ E + ++ P+ + L
Sbjct: 32 EQMKQPTPLPPPCQKVPVELPVEVPSKQEEKHMTAVKGLPEQECEQQQKEPQEQELQQQH 91
Query: 105 ------FQEQEEPEPGMEEAGEMEQKQLQKRFGGFTGARKSARKLANQKRFSEFMRQYLV 158
+Q+ E PE +++ +QL K+ + +KL +Q+ E +++
Sbjct: 92 WEQHEEYQKAENPEQQLKQEKTQRDQQLNKQL-------EEEKKLLDQQLDQELVKRDEQ 144
Query: 159 LSMQSSQ 165
L M+ Q
Sbjct: 145 LGMKKEQ 151
>gi|226053185 paternally expressed 3 isoform 3 [Homo sapiens]
Length = 1464
Score = 30.4 bits (67), Expect = 0.83
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 47 ECEEKVFPSPLWTPCTKV----------MARSSWQLSPAAPEHVAAALYQPRASEMQHLR 96
ECEE PSP ++ K+ + + ++ S A EH + +E +H R
Sbjct: 415 ECEEAFMPSPTFSELQKIYGKDKFYECRVCKETFLHSSALIEHQKIHFGDDKDNEREHER 474
Query: 97 RMPRVRSLFQEQEEPEPGMEEAGEMEQKQ 125
R R E P P + E +M K+
Sbjct: 475 ERERERG---ETFRPSPALNEFQKMYGKE 500
>gi|226053169 paternally expressed 3 isoform 1 [Homo sapiens]
Length = 1588
Score = 30.4 bits (67), Expect = 0.83
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 47 ECEEKVFPSPLWTPCTKV----------MARSSWQLSPAAPEHVAAALYQPRASEMQHLR 96
ECEE PSP ++ K+ + + ++ S A EH + +E +H R
Sbjct: 539 ECEEAFMPSPTFSELQKIYGKDKFYECRVCKETFLHSSALIEHQKIHFGDDKDNEREHER 598
Query: 97 RMPRVRSLFQEQEEPEPGMEEAGEMEQKQ 125
R R E P P + E +M K+
Sbjct: 599 ERERERG---ETFRPSPALNEFQKMYGKE 624
>gi|226053148 paternally expressed 3 isoform 2 [Homo sapiens]
Length = 1462
Score = 30.4 bits (67), Expect = 0.83
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 47 ECEEKVFPSPLWTPCTKV----------MARSSWQLSPAAPEHVAAALYQPRASEMQHLR 96
ECEE PSP ++ K+ + + ++ S A EH + +E +H R
Sbjct: 413 ECEEAFMPSPTFSELQKIYGKDKFYECRVCKETFLHSSALIEHQKIHFGDDKDNEREHER 472
Query: 97 RMPRVRSLFQEQEEPEPGMEEAGEMEQKQ 125
R R E P P + E +M K+
Sbjct: 473 ERERERG---ETFRPSPALNEFQKMYGKE 498
>gi|226053126 paternally expressed 3 isoform 1 [Homo sapiens]
Length = 1588
Score = 30.4 bits (67), Expect = 0.83
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 47 ECEEKVFPSPLWTPCTKV----------MARSSWQLSPAAPEHVAAALYQPRASEMQHLR 96
ECEE PSP ++ K+ + + ++ S A EH + +E +H R
Sbjct: 539 ECEEAFMPSPTFSELQKIYGKDKFYECRVCKETFLHSSALIEHQKIHFGDDKDNEREHER 598
Query: 97 RMPRVRSLFQEQEEPEPGMEEAGEMEQKQ 125
R R E P P + E +M K+
Sbjct: 599 ERERERG---ETFRPSPALNEFQKMYGKE 624
>gi|33354285 paternally expressed 3 isoform 1 [Homo sapiens]
Length = 1588
Score = 30.4 bits (67), Expect = 0.83
Identities = 23/89 (25%), Positives = 36/89 (40%), Gaps = 13/89 (14%)
Query: 47 ECEEKVFPSPLWTPCTKV----------MARSSWQLSPAAPEHVAAALYQPRASEMQHLR 96
ECEE PSP ++ K+ + + ++ S A EH + +E +H R
Sbjct: 539 ECEEAFMPSPTFSELQKIYGKDKFYECRVCKETFLHSSALIEHQKIHFGDDKDNEREHER 598
Query: 97 RMPRVRSLFQEQEEPEPGMEEAGEMEQKQ 125
R R E P P + E +M K+
Sbjct: 599 ERERERG---ETFRPSPALNEFQKMYGKE 624
>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
Length = 1080
Score = 30.4 bits (67), Expect = 0.83
Identities = 24/110 (21%), Positives = 49/110 (44%), Gaps = 6/110 (5%)
Query: 63 KVMARSSWQLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEME 122
K++AR ++ H A L + + LR+ +R E+ E E G+ E
Sbjct: 714 KLIARHKQEVRRLKSLHEAELLQSDERASQRCLRQAEELR------EQLEREKEALGQQE 767
Query: 123 QKQLQKRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRRRTLHQ 172
+++ ++RF + A + Q+ +SE + L Q++++R L +
Sbjct: 768 RERARQRFQQHLEQEQWALQQQRQRLYSEVAEERERLGQQAARQRAELEE 817
>gi|110347427 ubiquitin specific protease 34 [Homo sapiens]
Length = 3546
Score = 30.0 bits (66), Expect = 1.1
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 11 LSLFSSVFSSCQRDCLTCQEKLHPALDSFDLEVC----ILECEEKVFPSPLWTPCTKVMA 66
L +F+ + S QR CL C K + L+ F+ VC ++ + +V L CT +
Sbjct: 32 LKIFTYINSWTQRQCLCC-FKEYKHLEIFNQVVCALINLVIAQVQVLRDQLCKHCTTINI 90
Query: 67 RSSWQ 71
S+WQ
Sbjct: 91 DSTWQ 95
>gi|93141033 PAX interacting protein 1 [Homo sapiens]
Length = 1069
Score = 29.6 bits (65), Expect = 1.4
Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 3/83 (3%)
Query: 67 RSSWQLSPAAPEHVAAALY---QPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQ 123
R QL P +H + Q + Q L ++ + SL Q+Q++ + ++ M Q
Sbjct: 483 RPQQQLQPFQQQHALQQQFHQLQQHQLQQQQLAQLQQQHSLLQQQQQQQIQQQQLQRMHQ 542
Query: 124 KQLQKRFGGFTGARKSARKLANQ 146
+Q Q++ T S A Q
Sbjct: 543 QQQQQQMQSQTAPHLSQTSQALQ 565
>gi|38524614 zinc finger protein 773 [Homo sapiens]
Length = 442
Score = 29.3 bits (64), Expect = 1.8
Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 42 EVCILECEEKVFPSPLWTPCTKVMARSSWQLSPA-APEHVAAALYQPRASEMQHLRRMPR 100
E+ LE E+ F P W T + R SWQ + A A +A++ P ++ QH ++
Sbjct: 63 EITQLESWEEPF-MPAWEVVTSAILRGSWQGAKAEAAAEQSASVEVPSSNVQQHQKQHCG 121
Query: 101 VRSLFQEQEEPEPGMEEAG-EMEQKQLQKR 129
+ L + QE P + + +K LQ R
Sbjct: 122 EKPL-KRQEGRVPVLRSCRVHLSEKSLQSR 150
>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sapiens]
Length = 1293
Score = 28.9 bits (63), Expect = 2.4
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 90 SEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQKQLQKRFGGFTGARKSARKLANQKRF 149
+E+Q L R R L +EQ + + +A + +Q+Q Q++ G+ K + K
Sbjct: 941 AEIQKLEE-ERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPS---GTTKSL 996
Query: 150 SEFMRQYLVLSMQSSQRRRTLHQNGN 175
E ++Q MQ Q+++ HQ N
Sbjct: 997 LE-IQQEEARQMQKQQQQQQQHQQPN 1021
>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sapiens]
Length = 1320
Score = 28.9 bits (63), Expect = 2.4
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 90 SEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQKQLQKRFGGFTGARKSARKLANQKRF 149
+E+Q L R R L +EQ + + +A + +Q+Q Q++ G+ K + K
Sbjct: 968 AEIQKLEE-ERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPS---GTTKSL 1023
Query: 150 SEFMRQYLVLSMQSSQRRRTLHQNGN 175
E ++Q MQ Q+++ HQ N
Sbjct: 1024 LE-IQQEEARQMQKQQQQQQQHQQPN 1048
>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 28.9 bits (63), Expect = 2.4
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 90 SEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQKQLQKRFGGFTGARKSARKLANQKRF 149
+E+Q L R R L +EQ + + +A + +Q+Q Q++ G+ K + K
Sbjct: 947 AEIQKLEE-ERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPS---GTTKSL 1002
Query: 150 SEFMRQYLVLSMQSSQRRRTLHQNGN 175
E ++Q MQ Q+++ HQ N
Sbjct: 1003 LE-IQQEEARQMQKQQQQQQQHQQPN 1027
>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapiens]
Length = 1299
Score = 28.9 bits (63), Expect = 2.4
Identities = 23/86 (26%), Positives = 41/86 (47%), Gaps = 5/86 (5%)
Query: 90 SEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQKQLQKRFGGFTGARKSARKLANQKRF 149
+E+Q L R R L +EQ + + +A + +Q+Q Q++ G+ K + K
Sbjct: 947 AEIQKLEE-ERERQLREEQRRQQRELMKALQQQQQQQQQKLSGWGNVSKPS---GTTKSL 1002
Query: 150 SEFMRQYLVLSMQSSQRRRTLHQNGN 175
E ++Q MQ Q+++ HQ N
Sbjct: 1003 LE-IQQEEARQMQKQQQQQQQHQQPN 1027
>gi|68161546 misshapen/NIK-related kinase isoform 4 [Homo sapiens]
Length = 1312
Score = 28.9 bits (63), Expect = 2.4
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 86 QPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEME--QKQLQKRFGGFTGARKSARKL 143
Q R +MQ LRR R +EQE +EE + E Q+QLQ+ KS ++
Sbjct: 427 QRRLEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYL----KSLQQQ 482
Query: 144 ANQKRFSEFMRQYLV 158
Q++ + +Q L+
Sbjct: 483 QQQQQLQKQQQQQLL 497
>gi|24850117 misshapen/NIK-related kinase isoform 2 [Homo sapiens]
Length = 1303
Score = 28.9 bits (63), Expect = 2.4
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 86 QPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEME--QKQLQKRFGGFTGARKSARKL 143
Q R +MQ LRR R +EQE +EE + E Q+QLQ+ KS ++
Sbjct: 427 QRRLEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYL----KSLQQQ 482
Query: 144 ANQKRFSEFMRQYLV 158
Q++ + +Q L+
Sbjct: 483 QQQQQLQKQQQQQLL 497
>gi|27436917 misshapen/NIK-related kinase isoform 3 [Homo sapiens]
Length = 1332
Score = 28.9 bits (63), Expect = 2.4
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 86 QPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEME--QKQLQKRFGGFTGARKSARKL 143
Q R +MQ LRR R +EQE +EE + E Q+QLQ+ KS ++
Sbjct: 427 QRRLEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYL----KSLQQQ 482
Query: 144 ANQKRFSEFMRQYLV 158
Q++ + +Q L+
Sbjct: 483 QQQQQLQKQQQQQLL 497
>gi|7657335 misshapen/NIK-related kinase isoform 1 [Homo sapiens]
Length = 1295
Score = 28.9 bits (63), Expect = 2.4
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 86 QPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEME--QKQLQKRFGGFTGARKSARKL 143
Q R +MQ LRR R +EQE +EE + E Q+QLQ+ KS ++
Sbjct: 427 QRRLEDMQALRREEERRQAEREQEYKRKQLEEQRQSERLQRQLQQEHAYL----KSLQQQ 482
Query: 144 ANQKRFSEFMRQYLV 158
Q++ + +Q L+
Sbjct: 483 QQQQQLQKQQQQQLL 497
>gi|23510448 minichromosome maintenance complex component 5 [Homo
sapiens]
Length = 734
Score = 28.5 bits (62), Expect = 3.1
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 130 FGGFTGARKS-ARKLANQKRFSEFMRQYLV 158
FGG A + ARK Q+RF EF+RQY V
Sbjct: 15 FGGDAQADEGQARKSQLQRRFKEFLRQYRV 44
>gi|239753937 PREDICTED: similar to hCG2036828 [Homo sapiens]
Length = 275
Score = 28.5 bits (62), Expect = 3.1
Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 10/84 (11%)
Query: 92 MQHLRRMPRVRSLFQEQ-EEPEPGMEEAGEMEQKQLQKRF------GGFTGARKSARKLA 144
+QH PR R L +E+ PE EE E E+++ +RF G G+R SA L
Sbjct: 18 LQHKATSPRGRFLPEERLRRPEKAQEEE-EAEEEEGNRRFPNTLSEGAVRGSRLSA--LG 74
Query: 145 NQKRFSEFMRQYLVLSMQSSQRRR 168
+R SE S S+ RRR
Sbjct: 75 RPRRESEPGLSAAPSSPSSAPRRR 98
>gi|7662350 cell recognition molecule Caspr2 precursor [Homo
sapiens]
Length = 1331
Score = 28.5 bits (62), Expect = 3.1
Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 135 GARKSARKLANQKRFS--EFMRQYLVLSMQSSQRRRTLHQNGNV 176
G RK +A Q R+S +++ QY +L + + + HQ+GN+
Sbjct: 90 GNRKQISAIATQGRYSSSDWVTQYRMLYSDTGRNWKPYHQDGNI 133
>gi|207452735 epiplakin 1 [Homo sapiens]
Length = 5090
Score = 28.5 bits (62), Expect = 3.1
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 126 LQKRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRRRTLHQ 172
L ++G F G R SA +L N + FSE R+ L+ + QR TL Q
Sbjct: 819 LSVKYGRFQGQRVSAWELINSEYFSEGRRRQLL--RRYRQREVTLGQ 863
>gi|53729339 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 28.5 bits (62), Expect = 3.1
Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 68 SSWQLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQKQLQ 127
+ W+ P+A E + +PRA E+ R+ ++E E G E+ +E+K+ +
Sbjct: 419 TGWRDLPSAGEEILEVESEPRAREVVDWRKY---------EQEQEKGQEDLKIIEEKRKE 469
Query: 128 KRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRR 167
+ K L ++ F+ + + ++ ++R
Sbjct: 470 HKEAHQKAREKYGHLLWKKRSILRFLERKEQIPLKPKEKR 509
>gi|53729337 mitochondrial translational initiation factor 2
precursor [Homo sapiens]
Length = 727
Score = 28.5 bits (62), Expect = 3.1
Identities = 19/100 (19%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 68 SSWQLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSLFQEQEEPEPGMEEAGEMEQKQLQ 127
+ W+ P+A E + +PRA E+ R+ ++E E G E+ +E+K+ +
Sbjct: 419 TGWRDLPSAGEEILEVESEPRAREVVDWRKY---------EQEQEKGQEDLKIIEEKRKE 469
Query: 128 KRFGGFTGARKSARKLANQKRFSEFMRQYLVLSMQSSQRR 167
+ K L ++ F+ + + ++ ++R
Sbjct: 470 HKEAHQKAREKYGHLLWKKRSILRFLERKEQIPLKPKEKR 509
>gi|119220598 apolipoprotein B48 receptor [Homo sapiens]
Length = 1088
Score = 28.5 bits (62), Expect = 3.1
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
Query: 60 PCTKVMARSSWQLSPAAPEHVAAALYQPRASEMQHLRRMPRVRSLFQEQEEP-----EPG 114
P + AR + A + + + + S Q + R R+RS QE+EE EPG
Sbjct: 132 PSAHLEARKKSKAGSGACQDRSGQAQERQESHEQEVNREERLRSWEQEEEEEEVRAREPG 191
Query: 115 MEEAGEME 122
M E E
Sbjct: 192 MARGAESE 199
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.131 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,211,013
Number of Sequences: 37866
Number of extensions: 335835
Number of successful extensions: 1529
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 1489
Number of HSP's gapped (non-prelim): 73
length of query: 176
length of database: 18,247,518
effective HSP length: 95
effective length of query: 81
effective length of database: 14,650,248
effective search space: 1186670088
effective search space used: 1186670088
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.