Guide to the Human Genome
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Search of human proteins with 54234034

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|54234034 vacuolar protein sorting 54 isoform 1 [Homo
sapiens]
         (977 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|54234034 vacuolar protein sorting 54 isoform 1 [Homo sapiens]     1928   0.0  
gi|54234040 vacuolar protein sorting 54 isoform 2 [Homo sapiens]     1895   0.0  
gi|62865871 coiled-coil domain containing 132 isoform a [Homo sa...    44   0.001
gi|237858619 polyamine modulated factor 1 binding protein 1 isof...    40   0.008
gi|223941891 protein tyrosine phosphatase, non-receptor type 3 i...    39   0.031
gi|223941885 protein tyrosine phosphatase, non-receptor type 3 i...    39   0.031
gi|223941879 protein tyrosine phosphatase, non-receptor type 3 i...    39   0.031
gi|223941888 protein tyrosine phosphatase, non-receptor type 3 i...    37   0.090
gi|223941882 protein tyrosine phosphatase, non-receptor type 3 i...    37   0.090
gi|223941876 protein tyrosine phosphatase, non-receptor type 3 i...    37   0.090
gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens]             35   0.26 
gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]             35   0.26 
gi|239743293 PREDICTED: mucin 12 [Homo sapiens]                        35   0.26 
gi|239754668 PREDICTED: mucin 12 [Homo sapiens]                        35   0.45 
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]    35   0.45 
gi|206597470 neural precursor cell expressed, developmentally do...    34   0.59 
gi|206597468 neural precursor cell expressed, developmentally do...    34   0.59 
gi|23097254 neural precursor cell expressed, developmentally dow...    34   0.59 
gi|206597465 neural precursor cell expressed, developmentally do...    34   0.59 
gi|91982772 mucin 17 [Homo sapiens]                                    34   0.59 
gi|54124343 hypothetical protein LOC387680 [Homo sapiens]              34   0.59 
gi|30794488 kinesin family member 27 [Homo sapiens]                    33   1.00 
gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]    33   1.3  
gi|73858570 serpin peptidase inhibitor, clade G, member 1 precur...    33   1.3  
gi|73858568 serpin peptidase inhibitor, clade G, member 1 precur...    33   1.3  
gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]     33   1.3  
gi|154090959 hypothetical protein LOC55747 [Homo sapiens]              33   1.3  
gi|237858621 polyamine modulated factor 1 binding protein 1 isof...    33   1.7  
gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]        33   1.7  
gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo ...    32   2.2  

>gi|54234034 vacuolar protein sorting 54 isoform 1 [Homo sapiens]
          Length = 977

 Score = 1928 bits (4994), Expect = 0.0
 Identities = 977/977 (100%), Positives = 977/977 (100%)

Query: 1   MASSHSSSPVPQGSSSDVFFKIEVDPSKHIRPVPSLPDVCPKEPTGDSHSLYVAPSLVTD 60
           MASSHSSSPVPQGSSSDVFFKIEVDPSKHIRPVPSLPDVCPKEPTGDSHSLYVAPSLVTD
Sbjct: 1   MASSHSSSPVPQGSSSDVFFKIEVDPSKHIRPVPSLPDVCPKEPTGDSHSLYVAPSLVTD 60

Query: 61  QHRWTVYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY 120
           QHRWTVYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY
Sbjct: 61  QHRWTVYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY 120

Query: 121 QQEISQREKIHERCKNICPPKDTFERTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN 180
           QQEISQREKIHERCKNICPPKDTFERTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
Sbjct: 121 QQEISQREKIHERCKNICPPKDTFERTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN 180

Query: 181 SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE 240
           SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
Sbjct: 181 SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE 240

Query: 241 LQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ 300
           LQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
Sbjct: 241 LQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ 300

Query: 301 PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST 360
           PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
Sbjct: 301 PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST 360

Query: 361 YSHSDLNRPLEDDCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINK 420
           YSHSDLNRPLEDDCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINK
Sbjct: 361 YSHSDLNRPLEDDCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINK 420

Query: 421 VSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL 480
           VSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL
Sbjct: 421 VSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL 480

Query: 481 DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNA 540
           DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNA
Sbjct: 481 DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNA 540

Query: 541 SPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELGKLANNIQ 600
           SPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELGKLANNIQ
Sbjct: 541 SPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELGKLANNIQ 600

Query: 601 ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSL 660
           ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSL
Sbjct: 601 ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSL 660

Query: 661 LGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKS 720
           LGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKS
Sbjct: 661 LGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKS 720

Query: 721 GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF 780
           GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
Sbjct: 721 GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF 780

Query: 781 NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYSML 840
           NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYSML
Sbjct: 781 NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYSML 840

Query: 841 RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEA 900
           RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEA
Sbjct: 841 RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEA 900

Query: 901 IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK 960
           IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
Sbjct: 901 IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK 960

Query: 961 GLKDLDLNMAEIWEQKR 977
           GLKDLDLNMAEIWEQKR
Sbjct: 961 GLKDLDLNMAEIWEQKR 977


>gi|54234040 vacuolar protein sorting 54 isoform 2 [Homo sapiens]
          Length = 965

 Score = 1895 bits (4909), Expect = 0.0
 Identities = 965/977 (98%), Positives = 965/977 (98%), Gaps = 12/977 (1%)

Query: 1   MASSHSSSPVPQGSSSDVFFKIEVDPSKHIRPVPSLPDVCPKEPTGDSHSLYVAPSLVTD 60
           MASSHSSSPVPQGSSSDVFFKIEVDPSKHIRPVPSLPDVCPKEPT            VTD
Sbjct: 1   MASSHSSSPVPQGSSSDVFFKIEVDPSKHIRPVPSLPDVCPKEPT------------VTD 48

Query: 61  QHRWTVYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY 120
           QHRWTVYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY
Sbjct: 49  QHRWTVYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY 108

Query: 121 QQEISQREKIHERCKNICPPKDTFERTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN 180
           QQEISQREKIHERCKNICPPKDTFERTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
Sbjct: 109 QQEISQREKIHERCKNICPPKDTFERTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN 168

Query: 181 SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE 240
           SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
Sbjct: 169 SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE 228

Query: 241 LQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ 300
           LQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
Sbjct: 229 LQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ 288

Query: 301 PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST 360
           PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
Sbjct: 289 PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST 348

Query: 361 YSHSDLNRPLEDDCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINK 420
           YSHSDLNRPLEDDCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINK
Sbjct: 349 YSHSDLNRPLEDDCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAKNIIKQCVINK 408

Query: 421 VSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL 480
           VSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL
Sbjct: 409 VSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL 468

Query: 481 DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNA 540
           DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNA
Sbjct: 469 DKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNA 528

Query: 541 SPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELGKLANNIQ 600
           SPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELGKLANNIQ
Sbjct: 529 SPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELGKLANNIQ 588

Query: 601 ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSL 660
           ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSL
Sbjct: 589 ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSL 648

Query: 661 LGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKS 720
           LGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKS
Sbjct: 649 LGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKS 708

Query: 721 GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF 780
           GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
Sbjct: 709 GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF 768

Query: 781 NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYSML 840
           NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYSML
Sbjct: 769 NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYSML 828

Query: 841 RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEA 900
           RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEA
Sbjct: 829 RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEA 888

Query: 901 IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK 960
           IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
Sbjct: 889 IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK 948

Query: 961 GLKDLDLNMAEIWEQKR 977
           GLKDLDLNMAEIWEQKR
Sbjct: 949 GLKDLDLNMAEIWEQKR 965


>gi|62865871 coiled-coil domain containing 132 isoform a [Homo
           sapiens]
          Length = 964

 Score = 43.5 bits (101), Expect = 0.001
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 4/67 (5%)

Query: 638 LSRLMETFILDTEQICGRKSTSLLGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADV 697
           +SRLM+      E+ CG KS  L  +++ Q++ +   +H  R  +L + L+NE W+   V
Sbjct: 419 ISRLMQV----GEEFCGSKSEVLQESIRKQSVNYFKNYHRTRLDELRMFLENETWELCPV 474

Query: 698 PAEFQDL 704
            + F  L
Sbjct: 475 KSNFSIL 481


>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
           a [Homo sapiens]
          Length = 1007

 Score = 40.4 bits (93), Expect = 0.008
 Identities = 65/288 (22%), Positives = 129/288 (44%), Gaps = 30/288 (10%)

Query: 236 TSQHELQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMAT 295
           TSQ  +QD  ++ +   + L    AQ+DK + +   H L+  +T+    + Y+ L   + 
Sbjct: 685 TSQQVIQDLNKEIALQKESLMSLQAQLDKAL-QKEKHYLQTTITK----EAYDALSRKSA 739

Query: 296 VHQ---TQPTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQL-CELEKLID 351
             Q   TQ   ++   TSE       +  TQE   Q  + I ++     +L  EL KL  
Sbjct: 740 ACQDDLTQALEKLNHVTSETKSLQQSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRG 799

Query: 352 KMMIAEFSTYSHSDLNRPLED-DCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAK 410
               +E   ++    ++ LE+  CQVL+ ++       +L  ++    E + E+M    +
Sbjct: 800 FHQESELEVHA---FDKKLEEMSCQVLQWQKQHQNDLKMLAAKEEQLRE-FQEEMAALKE 855

Query: 411 NIIKQ----CVINKVSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIFSKF-------T 459
           N+++     C + + S  +  DT  + +  DQ+ M N  QW    K    K         
Sbjct: 856 NLLEDDKEPCCLPQWSVPK--DTCRLYRGNDQI-MTNLEQWAKQQKVANEKLGNQLREQV 912

Query: 460 IFLQRVKATLNIIHSVVLSVLDKNQRTRELEEISQQKNAAKDNSLDTE 507
            ++ ++    + +HSV++ +  +N++ +  +EI ++K  A++  L T+
Sbjct: 913 KYIAKLSGEKDHLHSVMVHLQQENKKLK--KEIEEKKMKAENTRLCTK 958


>gi|223941891 protein tyrosine phosphatase, non-receptor type 3
           isoform 6 [Homo sapiens]
          Length = 581

 Score = 38.5 bits (88), Expect = 0.031
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 482 KNQRTRELEEISQQKNAAKDNSLDTEVAYLIH-EGMFISDAFGEGELTPIAVDTTSQRNA 540
           K +  R   EI + ++++ DN L  E+ Y+   E +F +    +G L P   D+   +N 
Sbjct: 46  KKRSPRLRHEIRKPRHSSADN-LANEMTYITETEDVFYTY---KGSLAPQDSDSEVSQNR 101

Query: 541 SPNSEPCSSDSVSEPECTTDSSSSKEHTSS---SAIPGGVDIMVSED 584
           SP+ E  S ++ ++   T  SSSS   +S+   S  P GVD  + +D
Sbjct: 102 SPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDD 148


>gi|223941885 protein tyrosine phosphatase, non-receptor type 3
           isoform 4 [Homo sapiens]
          Length = 737

 Score = 38.5 bits (88), Expect = 0.031
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 482 KNQRTRELEEISQQKNAAKDNSLDTEVAYLIH-EGMFISDAFGEGELTPIAVDTTSQRNA 540
           K +  R   EI + ++++ DN L  E+ Y+   E +F +    +G L P   D+   +N 
Sbjct: 202 KKRSPRLRHEIRKPRHSSADN-LANEMTYITETEDVFYTY---KGSLAPQDSDSEVSQNR 257

Query: 541 SPNSEPCSSDSVSEPECTTDSSSSKEHTSS---SAIPGGVDIMVSED 584
           SP+ E  S ++ ++   T  SSSS   +S+   S  P GVD  + +D
Sbjct: 258 SPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDD 304


>gi|223941879 protein tyrosine phosphatase, non-receptor type 3
           isoform 2 [Homo sapiens]
          Length = 868

 Score = 38.5 bits (88), Expect = 0.031
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 8/107 (7%)

Query: 482 KNQRTRELEEISQQKNAAKDNSLDTEVAYLIH-EGMFISDAFGEGELTPIAVDTTSQRNA 540
           K +  R   EI + ++++ DN L  E+ Y+   E +F +    +G L P   D+   +N 
Sbjct: 333 KKRSPRLRHEIRKPRHSSADN-LANEMTYITETEDVFYTY---KGSLAPQDSDSEVSQNR 388

Query: 541 SPNSEPCSSDSVSEPECTTDSSSSKEHTSS---SAIPGGVDIMVSED 584
           SP+ E  S ++ ++   T  SSSS   +S+   S  P GVD  + +D
Sbjct: 389 SPHQESLSENNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDD 435


>gi|223941888 protein tyrosine phosphatase, non-receptor type 3
           isoform 5 [Homo sapiens]
          Length = 626

 Score = 37.0 bits (84), Expect = 0.090
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 491 EISQQKNAAKDNSLDTEVAYLIH-EGMFISDAFGEGELTPIAVDTTSQRNASPNSEPCSS 549
           EI + ++++ DN L  E+ Y+   E +F +    +G L P   D+   +N SP+ E  S 
Sbjct: 100 EIRKPRHSSADN-LANEMTYITETEDVFYTY---KGSLAPQDSDSEVSQNRSPHQESLSE 155

Query: 550 DSVSEPECTTDSSSSKEHTSS---SAIPGGVDIMVSED 584
           ++ ++   T  SSSS   +S+   S  P GVD  + +D
Sbjct: 156 NNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDD 193


>gi|223941882 protein tyrosine phosphatase, non-receptor type 3
           isoform 3 [Homo sapiens]
          Length = 782

 Score = 37.0 bits (84), Expect = 0.090
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 491 EISQQKNAAKDNSLDTEVAYLIH-EGMFISDAFGEGELTPIAVDTTSQRNASPNSEPCSS 549
           EI + ++++ DN L  E+ Y+   E +F +    +G L P   D+   +N SP+ E  S 
Sbjct: 256 EIRKPRHSSADN-LANEMTYITETEDVFYTY---KGSLAPQDSDSEVSQNRSPHQESLSE 311

Query: 550 DSVSEPECTTDSSSSKEHTSS---SAIPGGVDIMVSED 584
           ++ ++   T  SSSS   +S+   S  P GVD  + +D
Sbjct: 312 NNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDD 349


>gi|223941876 protein tyrosine phosphatase, non-receptor type 3
           isoform 1 [Homo sapiens]
          Length = 913

 Score = 37.0 bits (84), Expect = 0.090
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 8/98 (8%)

Query: 491 EISQQKNAAKDNSLDTEVAYLIH-EGMFISDAFGEGELTPIAVDTTSQRNASPNSEPCSS 549
           EI + ++++ DN L  E+ Y+   E +F +    +G L P   D+   +N SP+ E  S 
Sbjct: 387 EIRKPRHSSADN-LANEMTYITETEDVFYTY---KGSLAPQDSDSEVSQNRSPHQESLSE 442

Query: 550 DSVSEPECTTDSSSSKEHTSS---SAIPGGVDIMVSED 584
           ++ ++   T  SSSS   +S+   S  P GVD  + +D
Sbjct: 443 NNPAQSYLTQKSSSSVSPSSNAPGSCSPDGVDQQLLDD 480


>gi|239758148 PREDICTED: similar to mucin 11 [Homo sapiens]
          Length = 587

 Score = 35.4 bits (80), Expect = 0.26
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 521 AFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIM 580
           AF +   TP      S+ + + +S P S+D+   P  TT S  S+E T+S + PG  D  
Sbjct: 167 AFPDSTTTP----GLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTA 222

Query: 581 VS 582
           +S
Sbjct: 223 LS 224



 Score = 32.3 bits (72), Expect = 2.2
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 514 EGMFISDAFGEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTS 569
           E   +  + G  E T +   TT    S+++ +  S P S D+   P  TT S  S+E T+
Sbjct: 462 ESTTVHSSPGSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTT 521

Query: 570 SSAIPG 575
           S + PG
Sbjct: 522 SHSRPG 527



 Score = 30.4 bits (67), Expect = 8.5
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 523 GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVD 578
           G  E T +   TT    S+++ + +S P S  +   P  TT S  S+E T+S + PG   
Sbjct: 105 GSMETTALPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTH 164

Query: 579 IMVSEDMKLT 588
                D   T
Sbjct: 165 TTAFPDSTTT 174


>gi|239752490 PREDICTED: similar to Mucin-12 [Homo sapiens]
          Length = 456

 Score = 35.4 bits (80), Expect = 0.26
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 521 AFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIM 580
           AF +   TP      S+ + + +S P S+D+   P  TT S  S+E T+S + PG  D  
Sbjct: 61  AFPDSTTTP----GLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTA 116

Query: 581 VS 582
           +S
Sbjct: 117 LS 118



 Score = 32.3 bits (72), Expect = 2.2
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 514 EGMFISDAFGEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTS 569
           E   +  + G  E T +   TT    S+++ +  S P S D+   P  TT S  S+E T+
Sbjct: 356 ESTTVHSSPGSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTT 415

Query: 570 SSAIPG 575
           S + PG
Sbjct: 416 SHSRPG 421


>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
          Length = 5478

 Score = 35.4 bits (80), Expect = 0.26
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 521  AFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIM 580
            AF +   TP      S+ + + +S P S+D+   P  TT S  S+E T+S + PG  D  
Sbjct: 2091 AFPDSTTTP----GLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTA 2146

Query: 581  VS 582
            +S
Sbjct: 2147 LS 2148



 Score = 35.4 bits (80), Expect = 0.26
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 521  AFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIM 580
            AF +   TP      S+ + + +S P S+D+   P  TT S  S+E T+S + PG  D  
Sbjct: 2565 AFPDSTTTP----GLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSPGSTDTA 2620

Query: 581  VS 582
            +S
Sbjct: 2621 LS 2622



 Score = 34.7 bits (78), Expect = 0.45
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 536 SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELG 593
           S+++ + +S P  + +++ P+ TT    S+E T+S +IPG  D  +S     T S LG
Sbjct: 305 SEKSTTSHSRPGPTHTIAFPDSTTMPGVSQESTASHSIPGSTDTTLSPG-TTTPSSLG 361



 Score = 34.3 bits (77), Expect = 0.59
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 4/62 (6%)

Query: 521  AFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIM 580
            AF +   TP      S+ + + +S P S+D+   P  TT S SS+E T+S +  G  D  
Sbjct: 3648 AFPDSTTTP----GLSRHSTTSHSSPGSTDTTLLPASTTTSGSSQESTTSHSSSGSTDTA 3703

Query: 581  VS 582
            +S
Sbjct: 3704 LS 3705



 Score = 32.3 bits (72), Expect = 2.2
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 521  AFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIM 580
            AF +   TP      S+ + + +S P S+D+   P  TT S  S+E T+S +  G  D  
Sbjct: 1008 AFPDSTTTP----GLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTA 1063

Query: 581  VS 582
            +S
Sbjct: 1064 LS 1065



 Score = 32.3 bits (72), Expect = 2.2
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 4/59 (6%)

Query: 523  GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGV 577
            G  E T +   TT    S+++ +  S P S D+   P  TT S  S+E T+S + PG +
Sbjct: 4311 GSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPGSM 4369



 Score = 32.0 bits (71), Expect = 2.9
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 523  GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPG 575
            G  E T +   TT    S+++ +  S P S D+   P  TT S  S+E T+S + PG
Sbjct: 1671 GSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPG 1727



 Score = 32.0 bits (71), Expect = 2.9
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 523  GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPG 575
            G  E T +   TT    S+++ +  S P S D+   P  TT S  S+E T+S + PG
Sbjct: 3228 GSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPG 3284



 Score = 31.6 bits (70), Expect = 3.8
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 523  GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVD 578
            G  E T +   TT    S+R+ + +S P S  +   P  TT S  S+E T+S + PG   
Sbjct: 946  GSMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTH 1005

Query: 579  IMVSEDMKLT 588
                 D   T
Sbjct: 1006 TTAFPDSTTT 1015



 Score = 31.2 bits (69), Expect = 5.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSED 584
            SQ + + +S P S+D+   P  TT SS   E T+  + PG  +  +  D
Sbjct: 1744 SQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTLLPD 1792



 Score = 31.2 bits (69), Expect = 5.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSED 584
            SQ + + +S P S+D+   P  TT SS   E T+  + PG  +  +  D
Sbjct: 4384 SQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTLLPD 4432



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELG 593
            S+ + + +S P S+ + + P  TT    S+E T+S + PG  D  +S     T S LG
Sbjct: 1716 SEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPG-STTASSLG 1772



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 13/43 (30%), Positives = 26/43 (60%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVD 578
            S+ +++ +S+P S+ + + P+ TT    S+  T+S + PG  D
Sbjct: 2548 SEESSTSHSQPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTD 2590



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELG 593
            S+ + + +S P S+ + + P  TT    S+E T+S + PG  D  +S     T S LG
Sbjct: 3273 SEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPG-STTASSLG 3329



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELG 593
            S+ + + +S P S  + + P  TT    S+E T+S + PG  D  +S     T S LG
Sbjct: 4356 SEESTTSHSRPGSMHTTAFPSSTTMPGVSQESTASHSSPGSTDTTLSPG-STTASSLG 4412



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 524  EGELTPIAVDTTS--QRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVD 578
            E  L+P ++ T+S  Q   +P+S+P S+ S   P  TT    S+E T+  + PG  +
Sbjct: 4948 ETTLSPGSITTSSFAQEFTTPHSQPGSALSTVSPASTTVPGLSEESTTFYSSPGSTE 5004



 Score = 30.4 bits (67), Expect = 8.5
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 523  GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVD 578
            G  E T +   TT    S+++ + +S P S  +   P  TT S  S+E T+S + PG   
Sbjct: 2029 GSMETTALPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTH 2088

Query: 579  IMVSEDMKLT 588
                 D   T
Sbjct: 2089 TTAFPDSTTT 2098



 Score = 30.4 bits (67), Expect = 8.5
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSED 584
            SQ + + +S P S+D+   P  TT SS   E T+  + PG  +  +  D
Sbjct: 3301 SQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSGPGSTETTLLPD 3349



 Score = 30.4 bits (67), Expect = 8.5
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 523  GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVD 578
            G  E T +   TT    S+++ + +S P S  +   P  TT S  S+E T+S + PG   
Sbjct: 3586 GSMETTALPGSTTTPGLSEKSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTH 3645

Query: 579  IMVSEDMKLT 588
                 D   T
Sbjct: 3646 TTAFPDSTTT 3655


>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
          Length = 1952

 Score = 34.7 bits (78), Expect = 0.45
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 536 SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELG 593
           S+++ + +S P  + +++ P+ TT    S+E T+S +IPG  D  +S     T S LG
Sbjct: 226 SEKSTTSHSRPGPTHTIAFPDSTTMPGVSQESTASHSIPGSTDTTLSPG-TTTPSSLG 282



 Score = 32.0 bits (71), Expect = 2.9
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 523  GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPG 575
            G  E T +   TT    S+++ +  S P S D+   P  TT S  S+E T+S + PG
Sbjct: 978  GSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPG 1034



 Score = 31.6 bits (70), Expect = 3.8
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 523 GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVD 578
           G  E T +   TT    S+R+ + +S P S  +   P  TT S  S+E T+S + PG   
Sbjct: 867 GSMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPGSTH 926

Query: 579 IMVSEDMKLT 588
                D   T
Sbjct: 927 TTAFPDSTTT 936



 Score = 31.2 bits (69), Expect = 5.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSED 584
            SQ + + +S P S+D+   P  TT SS   E T+  + PG  +  +  D
Sbjct: 1051 SQESTASHSSPGSTDTTLSPRSTTASSLGPESTTFHSGPGSTETTLLPD 1099



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELG 593
            S+ + + +S P S+ + + P  TT    S+E T+S + PG  D  +S     T S LG
Sbjct: 1023 SEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLS-PRSTTASSLG 1079



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 524  EGELTPIAVDTTS--QRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVD 578
            E  L+P ++ T+S  Q   +P+S+P S+ S   P  TT    S+E T+  + PG  +
Sbjct: 1422 ETTLSPGSITTSSFAQEFTTPHSQPGSALSTVSPASTTVPGLSEESTTFYSSPGSTE 1478


>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
          Length = 861

 Score = 34.7 bits (78), Expect = 0.45
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 1/58 (1%)

Query: 536 SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELG 593
           S+++ + +S P  + +++ P+ TT    S+E T+S +IPG  D  +S     T S LG
Sbjct: 161 SEKSTTSHSRPGPTHTIAFPDSTTMPGVSQESTASHSIPGSTDTTLSPG-TTTPSSLG 217



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 523 GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPG 575
           G  E T +   TT    S+R+ + +S P S  +   P  TT S  S+E T+S + PG
Sbjct: 802 GSMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSHSRPG 858



 Score = 30.4 bits (67), Expect = 8.5
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 536 SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSED 584
           SQ + + +S P  +D+   P  TT SS   E+T+  + PG  +  +  D
Sbjct: 545 SQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSSPGSTETTLLPD 593


>gi|206597470 neural precursor cell expressed, developmentally
           down-regulated 1 isoform c [Homo sapiens]
          Length = 571

 Score = 34.3 bits (77), Expect = 0.59
 Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 25/204 (12%)

Query: 448 FDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL-----DKNQRTRELEEISQQKNAAKDN 502
           FD L  + S F      V ++ +++HS  L+V       +    R+L   S++    K  
Sbjct: 344 FDFLPQLNSVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGKQE 403

Query: 503 SLDT--EVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTD 560
           S D+  ++A L+  G       G    +P +  T +            +  + EP    +
Sbjct: 404 SKDSFKQLAKLVTSGA----ESGNLNTSPSSNQTRNSEKFEKPENEIEAQLICEPPI--N 457

Query: 561 SSSSKEHTSSSAIPGGVDIMVSEDMK-----------LTDSELGKLANNIQELLYSASDI 609
            SS+     +S++  GV   +SE +            LT  ++  + N IQE L    + 
Sbjct: 458 GSSTPNPKIASSVTAGVASSLSEKIADSIGNNRQNAPLTSIQIRFIQNMIQETLDDFREA 517

Query: 610 CHDRAVKFLMSRAKDGFLEKLNSM 633
           CH   V   +   K  F  +LN M
Sbjct: 518 CHRDIVNLQVEMIKQ-FHMQLNEM 540


>gi|206597468 neural precursor cell expressed, developmentally
           down-regulated 1 isoform b [Homo sapiens]
          Length = 660

 Score = 34.3 bits (77), Expect = 0.59
 Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 25/204 (12%)

Query: 448 FDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL-----DKNQRTRELEEISQQKNAAKDN 502
           FD L  + S F      V ++ +++HS  L+V       +    R+L   S++    K  
Sbjct: 433 FDFLPQLNSVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGKQE 492

Query: 503 SLDT--EVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTD 560
           S D+  ++A L+  G       G    +P +  T +            +  + EP    +
Sbjct: 493 SKDSFKQLAKLVTSGA----ESGNLNTSPSSNQTRNSEKFEKPENEIEAQLICEPPI--N 546

Query: 561 SSSSKEHTSSSAIPGGVDIMVSEDMK-----------LTDSELGKLANNIQELLYSASDI 609
            SS+     +S++  GV   +SE +            LT  ++  + N IQE L    + 
Sbjct: 547 GSSTPNPKIASSVTAGVASSLSEKIADSIGNNRQNAPLTSIQIRFIQNMIQETLDDFREA 606

Query: 610 CHDRAVKFLMSRAKDGFLEKLNSM 633
           CH   V   +   K  F  +LN M
Sbjct: 607 CHRDIVNLQVEMIKQ-FHMQLNEM 629


>gi|23097254 neural precursor cell expressed, developmentally
           down-regulated 1 isoform b [Homo sapiens]
          Length = 660

 Score = 34.3 bits (77), Expect = 0.59
 Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 25/204 (12%)

Query: 448 FDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL-----DKNQRTRELEEISQQKNAAKDN 502
           FD L  + S F      V ++ +++HS  L+V       +    R+L   S++    K  
Sbjct: 433 FDFLPQLNSVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGKQE 492

Query: 503 SLDT--EVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTD 560
           S D+  ++A L+  G       G    +P +  T +            +  + EP    +
Sbjct: 493 SKDSFKQLAKLVTSGA----ESGNLNTSPSSNQTRNSEKFEKPENEIEAQLICEPPI--N 546

Query: 561 SSSSKEHTSSSAIPGGVDIMVSEDMK-----------LTDSELGKLANNIQELLYSASDI 609
            SS+     +S++  GV   +SE +            LT  ++  + N IQE L    + 
Sbjct: 547 GSSTPNPKIASSVTAGVASSLSEKIADSIGNNRQNAPLTSIQIRFIQNMIQETLDDFREA 606

Query: 610 CHDRAVKFLMSRAKDGFLEKLNSM 633
           CH   V   +   K  F  +LN M
Sbjct: 607 CHRDIVNLQVEMIKQ-FHMQLNEM 629


>gi|206597465 neural precursor cell expressed, developmentally
           down-regulated 1 isoform a [Homo sapiens]
          Length = 667

 Score = 34.3 bits (77), Expect = 0.59
 Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 25/204 (12%)

Query: 448 FDLLKDIFSKFTIFLQRVKATLNIIHSVVLSVL-----DKNQRTRELEEISQQKNAAKDN 502
           FD L  + S F      V ++ +++HS  L+V       +    R+L   S++    K  
Sbjct: 440 FDFLPQLNSVFPPRKNPVTSSTSVLHSSPLNVFMGSPGKEENENRDLTAESKKIYMGKQE 499

Query: 503 SLDT--EVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTD 560
           S D+  ++A L+  G       G    +P +  T +            +  + EP    +
Sbjct: 500 SKDSFKQLAKLVTSGA----ESGNLNTSPSSNQTRNSEKFEKPENEIEAQLICEPPI--N 553

Query: 561 SSSSKEHTSSSAIPGGVDIMVSEDMK-----------LTDSELGKLANNIQELLYSASDI 609
            SS+     +S++  GV   +SE +            LT  ++  + N IQE L    + 
Sbjct: 554 GSSTPNPKIASSVTAGVASSLSEKIADSIGNNRQNAPLTSIQIRFIQNMIQETLDDFREA 613

Query: 610 CHDRAVKFLMSRAKDGFLEKLNSM 633
           CH   V   +   K  F  +LN M
Sbjct: 614 CHRDIVNLQVEMIKQ-FHMQLNEM 636


>gi|91982772 mucin 17 [Homo sapiens]
          Length = 4493

 Score = 34.3 bits (77), Expect = 0.59
 Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 487 RELEEISQ--QKNAAKDNSLDTEVAYLIHEGMFISDAFGEGELTPIAVDTTSQRNASPNS 544
           R+ +++SQ  +  +A + +  T    ++   M++S +    E+T I    TS      ++
Sbjct: 50  RQCQQLSQHVRTGSAANTATGTTSTNVVEPRMYLSCSTNP-EMTSIESSVTSDTPGVSST 108

Query: 545 EPCSSDSVSEPECTTDSS----SSKEHTSSSAIPGGVDIMVS 582
               ++S +  E T+DS+    SS E TSS   P G D+ +S
Sbjct: 109 RMTPTESRTTSESTSDSTTLFPSSTEDTSSPTTPEGTDVPMS 150


>gi|54124343 hypothetical protein LOC387680 [Homo sapiens]
          Length = 1341

 Score = 34.3 bits (77), Expect = 0.59
 Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 13/185 (7%)

Query: 532 VDTTSQRNASPNSEPCSSDSV-SEPECTTD---SSSSKEHTSSSAIPGGVDIMVS--EDM 585
           V  +S +N  P+SE  +   + S+ E + D   S S+ +   +S +PG +  +VS  +D 
Sbjct: 517 VTLSSSKNLKPSSETKTQKGLFSDEEDSEDLFSSQSASKLKGASLLPGKLPTLVSLFDDE 576

Query: 586 KLTDSELGKLANNIQELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETF 645
              D+  G  A   Q L   A     ++A    +S+ K   L   +  E        +T 
Sbjct: 577 DEEDNLFGGTAAKKQTLCLQAQR--EEKAKASELSKKKASALLFSSDEEDQWNIPASQTH 634

Query: 646 ILDTEQICGRKSTSLLGALQSQ---AIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQ 702
           +    +  G    S  G LQSQ   A+K  + F E+ +  L  +  + + K   V   F+
Sbjct: 635 LASDSRSKGEPRDS--GTLQSQEAKAVKKTSLFEEDEEDDLFAIAKDSQKKTQRVSLLFE 692

Query: 703 DLVDS 707
           D VDS
Sbjct: 693 DDVDS 697


>gi|30794488 kinesin family member 27 [Homo sapiens]
          Length = 1401

 Score = 33.5 bits (75), Expect = 1.00
 Identities = 77/394 (19%), Positives = 165/394 (41%), Gaps = 31/394 (7%)

Query: 343  LCELEKLIDKMMIAEFSTYSHSDLNRPLEDDCQVLE------EERLISLVFGLLKQRKLN 396
            +C L +L D     + S   + DL      + Q L        ER+++     +++  +N
Sbjct: 673  VCSLVELSDTQDETQKSDLENEDLKIDCLQESQELNLQKLKNSERILTEAKQKMRELTIN 732

Query: 397  FL--EIYGEKMVIT---AKNIIKQCVINKVSQTEEIDTDVVVKLADQMRMLNFPQWFDLL 451
                E   ++++ T   AK++ KQ  + KV++ E       V+L +  + L   +  DL 
Sbjct: 733  IKMKEDLIKELIKTGNDAKSVSKQYSL-KVTKLEHDAEQAKVELIETQKQLQELENKDL- 790

Query: 452  KDIFSKFTIFLQRVKATLNIIHSVVLSVLDKNQRTRELEEISQQKNAAKDNSLDTEVAYL 511
             D+  K  +  +  +  ++     V  +  K Q +++L  +S Q N  + N L+  V ++
Sbjct: 791  SDVAMKVKL-QKEFRKKMDAAKLRVQVLQKKQQDSKKLASLSIQ-NEKRANELEQSVDHM 848

Query: 512  IHEGMFISDAFGEGELTPIAVDTTSQRNASPNSE---PCSSDSVSEPECTT-DSSSSKEH 567
             ++ + +     E       +D   +R+     E       +   +P+    D+ + K  
Sbjct: 849  KYQKIQLQRKLREENEKRKQLDAVIKRDQQKIKEIQLKTGQEEGLKPKAEDLDACNLKRR 908

Query: 568  TSSSAIPGGVDIM--VSEDMKLTDSELGKLANNIQELLYSASDICHDRAVKFLMSRAKDG 625
              S    G +D +  + E  K  D E+ K+ N  QEL    +D+    A+       K+ 
Sbjct: 909  KGSF---GSIDHLQKLDEQKKWLDEEVEKVLNQRQELEELEADLKKREAI----VSKKEA 961

Query: 626  FLEKLNSMEFITLSRLMETFILDTEQICGRKSTSLLGALQSQAIKFVNRFHEERKTKLSL 685
             L++ + +E     +L  +  L+T+ +      +LL    S+    +     E KTK+S 
Sbjct: 962  LLQEKSHLE---NKKLRSSQALNTDSLKISTRLNLLEQELSEKNVQLQTSTAEEKTKISE 1018

Query: 686  LLDNERWKQADVPAEFQDLVDSLSDGKIALPEKK 719
             ++  + ++  +     ++ + L +G++  PE++
Sbjct: 1019 QVEVLQKEKDQLQKRRHNVDEKLKNGRVLSPEEE 1052


>gi|48762942 huntingtin interacting protein-1-related [Homo sapiens]
          Length = 1068

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 1/103 (0%)

Query: 624 DGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSLLGALQSQAIKFVNRFHEERKTKL 683
           +G ++    ++  +L R +E    + E+I   ++   +  L+SQ         E+RK K 
Sbjct: 345 NGSVKDDRDLQIESLKREVEMLRSELEKI-KLEAQRYIAQLKSQVNALEGELEEQRKQKQ 403

Query: 684 SLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKSGATEER 726
             L+DNE+ +          L    S G     E+K+ ATE R
Sbjct: 404 KALVDNEQLRHELAQLRAAQLEGERSQGLREEAERKASATEAR 446


>gi|73858570 serpin peptidase inhibitor, clade G, member 1 precursor
           [Homo sapiens]
          Length = 500

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 528 TPIAVDTTSQRNASPNSEPCSSDSVSEPECTTD--SSSSKEHTSSSAIPGGVDIMVSEDM 585
           T I  +TT +    P +EP +  ++   + TT   + S  + T+ S  PG V +    + 
Sbjct: 76  TKITANTTDEPTTQPTTEPTTQPTIQPTQPTTQLPTDSPTQPTTGSFCPGPVTLCSDLES 135

Query: 586 KLTDSELGKLANNIQELLYSA 606
             T++ LG    +    LY A
Sbjct: 136 HSTEAVLGDALVDFSLKLYHA 156


>gi|73858568 serpin peptidase inhibitor, clade G, member 1 precursor
           [Homo sapiens]
          Length = 500

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 2/81 (2%)

Query: 528 TPIAVDTTSQRNASPNSEPCSSDSVSEPECTTD--SSSSKEHTSSSAIPGGVDIMVSEDM 585
           T I  +TT +    P +EP +  ++   + TT   + S  + T+ S  PG V +    + 
Sbjct: 76  TKITANTTDEPTTQPTTEPTTQPTIQPTQPTTQLPTDSPTQPTTGSFCPGPVTLCSDLES 135

Query: 586 KLTDSELGKLANNIQELLYSA 606
             T++ LG    +    LY A
Sbjct: 136 HSTEAVLGDALVDFSLKLYHA 156


>gi|239750456 PREDICTED: similar to KIAA0655 protein [Homo sapiens]
          Length = 1048

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 1/103 (0%)

Query: 624 DGFLEKLNSMEFITLSRLMETFILDTEQICGRKSTSLLGALQSQAIKFVNRFHEERKTKL 683
           +G ++    ++  +L R +E    + E+I   ++   +  L+SQ         E+RK K 
Sbjct: 325 NGSVKDDRDLQIESLKREVEMLRSELEKI-KLEAQRYIAQLKSQVNALEGELEEQRKQKQ 383

Query: 684 SLLLDNERWKQADVPAEFQDLVDSLSDGKIALPEKKSGATEER 726
             L+DNE+ +          L    S G     E+K+ ATE R
Sbjct: 384 KALVDNEQLRHELAQLRAAQLEGERSQGLREEAERKASATEAR 426


>gi|154090959 hypothetical protein LOC55747 [Homo sapiens]
          Length = 1253

 Score = 33.1 bits (74), Expect = 1.3
 Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 13/185 (7%)

Query: 532 VDTTSQRNASPNSEPCSSDSV-SEPECTTD---SSSSKEHTSSSAIPGGVDIMVS--EDM 585
           V  +S +N  P+SE  +   + S+ E + D   S S+ +   +S +PG +   VS  +D 
Sbjct: 429 VTLSSSKNLKPSSETKTQKGLFSDEEDSEDLFSSQSASKLKGASLLPGKLPTSVSLFDDE 488

Query: 586 KLTDSELGKLANNIQELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETF 645
              D+  G  A   Q L   A     ++A    +S+ K   L   +  E        +T 
Sbjct: 489 DEEDNLFGGTAAKKQTLCLQAQR--EEKAKASELSKKKASALLFSSDEEDQWNIPASQTH 546

Query: 646 ILDTEQICGRKSTSLLGALQSQ---AIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQ 702
           +    +  G    S  G LQSQ   A+K  + F E+ +  L  +  + + K   V   F+
Sbjct: 547 LASDSRSKGEPRDS--GTLQSQEAKAVKKTSLFEEDEEDDLFAIAKDSQKKTQRVSLLFE 604

Query: 703 DLVDS 707
           D VDS
Sbjct: 605 DDVDS 609


>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
           b [Homo sapiens]
          Length = 882

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 53/221 (23%), Positives = 98/221 (44%), Gaps = 21/221 (9%)

Query: 236 TSQHELQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMAT 295
           TSQ  +QD  ++ +   + L    AQ+DK + +   H L+  +T+    + Y+ L   + 
Sbjct: 540 TSQQVIQDLNKEIALQKESLMSLQAQLDKAL-QKEKHYLQTTITK----EAYDALSRKSA 594

Query: 296 VHQ---TQPTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQL-CELEKLID 351
             Q   TQ   ++   TSE       +  TQE   Q  + I ++     +L  EL KL  
Sbjct: 595 ACQDDLTQALEKLNHVTSETKSLQQSLTQTQEKKAQLEEEIIAYEERMKKLNTELRKLRG 654

Query: 352 KMMIAEFSTYSHSDLNRPLED-DCQVLEEERLISLVFGLLKQRKLNFLEIYGEKMVITAK 410
               +E   ++    ++ LE+  CQVL+ ++       +L  ++    E + E+M    +
Sbjct: 655 FHQESELEVHA---FDKKLEEMSCQVLQWQKQHQNDLKMLAAKEEQLRE-FQEEMAALKE 710

Query: 411 NIIKQ----CVINKVSQTEEIDTDVVVKLADQMRMLNFPQW 447
           N+++     C + + S  +  DT  + +  DQ+ M N  QW
Sbjct: 711 NLLEDDKEPCCLPQWSVPK--DTCRLYRGNDQI-MTNLEQW 748


>gi|46592991 GRIP1 associated protein 1 isoform 1 [Homo sapiens]
          Length = 841

 Score = 32.7 bits (73), Expect = 1.7
 Identities = 23/96 (23%), Positives = 41/96 (42%), Gaps = 2/96 (2%)

Query: 236 TSQHELQDYLRKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMAT 295
           T+ ++L D LRK    +  LR K+A +DK   +    + +    +   V +     L A 
Sbjct: 22  TNNYQLSDELRKNGVELTSLRQKVAYLDKEFSKAQKALSKSKKAQEVEVLLSENEMLQAK 81

Query: 296 VHQTQPTVQVLLSTSEFVGALDLIATTQEVLQQELQ 331
           +H  +   +  L  S  +     + +  E L+QE Q
Sbjct: 82  LHSQEEDFR--LQNSTLMAEFSKLCSQMEQLEQENQ 115


>gi|239508976 PREDICTED: mucin 12, cell surface associated [Homo
           sapiens]
          Length = 2036

 Score = 32.3 bits (72), Expect = 2.2
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 4/62 (6%)

Query: 521 AFGEGELTPIAVDTTSQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIM 580
           AF +   TP      S+ + + +S P S+D+   P  TT S  S+E T+S +  G  D  
Sbjct: 495 AFPDSTTTP----GLSRHSTTSHSSPGSTDTTLLPASTTTSGPSQESTTSHSSSGSTDTA 550

Query: 581 VS 582
           +S
Sbjct: 551 LS 552



 Score = 32.0 bits (71), Expect = 2.9
 Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 4/57 (7%)

Query: 523  GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPG 575
            G  E T +   TT    S+++ +  S P S D+   P  TT S  S+E T+S + PG
Sbjct: 1158 GSTETTALPGSTTTAGLSEKSTTFYSSPRSPDTTLSPASTTSSGVSEESTTSHSRPG 1214



 Score = 31.6 bits (70), Expect = 3.8
 Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)

Query: 523 GEGELTPIAVDTT----SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVD 578
           G  E T +   TT    S+R+ + +S P S  +   P  TT S  S+E T+S + PG   
Sbjct: 433 GSMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPASTTSSGVSEESTTSRSRPGSTH 492

Query: 579 IMVSEDMKLT 588
                D   T
Sbjct: 493 TTAFPDSTTT 502



 Score = 31.2 bits (69), Expect = 5.0
 Identities = 16/49 (32%), Positives = 25/49 (51%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSED 584
            SQ + + +S P S+D+   P  TT SS   E T+  + PG  +  +  D
Sbjct: 1231 SQESTASHSSPGSTDTTLSPGSTTASSLGPESTTFHSSPGSTETTLLPD 1279



 Score = 30.8 bits (68), Expect = 6.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 536  SQRNASPNSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSEDMKLTDSELG 593
            S+ + + +S P S+ + + P  TT    S+E T+S + PG  D  +S     T S LG
Sbjct: 1203 SEESTTSHSRPGSTHTTAFPGSTTMPGVSQESTASHSSPGSTDTTLSPG-STTASSLG 1259


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.379 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,345,952
Number of Sequences: 37866
Number of extensions: 1513450
Number of successful extensions: 5215
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 4989
Number of HSP's gapped (non-prelim): 266
length of query: 977
length of database: 18,247,518
effective HSP length: 112
effective length of query: 865
effective length of database: 14,006,526
effective search space: 12115644990
effective search space used: 12115644990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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