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Search of human proteins with 5292161
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5292161 proteasome 26S non-ATPase subunit 4 [Homo sapiens]
(377 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5292161 proteasome 26S non-ATPase subunit 4 [Homo sapiens] 737 0.0
gi|6681762 general transcription factor IIH, polypeptide 2, 44kD... 42 0.001
gi|148922852 general transcription factor IIH, polypeptide 2C [H... 41 0.002
gi|109809737 general transcription factor IIH, polypeptide 2D [H... 41 0.002
gi|148922900 general transcription factor IIH, polypeptide 2B [H... 39 0.008
gi|7669550 vinculin isoform meta-VCL [Homo sapiens] 34 0.25
gi|4557509 cylicin 2 [Homo sapiens] 33 0.32
gi|191252816 extracellular leucine-rich repeat and fibronectin t... 32 0.94
gi|157168372 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 32 0.94
gi|117956409 amyotrophic lateral sclerosis 2 (juvenile) chromoso... 32 0.94
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)... 32 0.94
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)... 32 0.94
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)... 32 0.94
gi|94538362 flotillin 2 [Homo sapiens] 32 0.94
gi|209862748 ataxin 3-like [Homo sapiens] 32 0.94
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens] 32 1.2
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens] 32 1.2
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens] 32 1.2
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 32 1.2
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 32 1.2
gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog... 32 1.2
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 31 1.6
gi|134133288 zinc finger protein 407 isoform 1 [Homo sapiens] 31 1.6
gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens] 31 1.6
gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens] 31 1.6
gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens] 31 1.6
gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens] 31 2.1
gi|224809466 anthrax toxin receptor 2 isoform 2 [Homo sapiens] 31 2.1
gi|50513243 anthrax toxin receptor 2 isoform 1 [Homo sapiens] 31 2.1
gi|21264355 SWI/SNF-related matrix-associated actin-dependent re... 31 2.1
>gi|5292161 proteasome 26S non-ATPase subunit 4 [Homo sapiens]
Length = 377
Score = 737 bits (1903), Expect = 0.0
Identities = 377/377 (100%), Positives = 377/377 (100%)
Query: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV
Sbjct: 1 MVLESTMVCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLITLANDCEV 60
Query: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN
Sbjct: 61 LTTLTPDTGRILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDN 120
Query: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA
Sbjct: 121 EKDLVKLAKRLKKEKVNVDIINFGEEEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLA 180
Query: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA
Sbjct: 181 DALISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAA 240
Query: 241 ASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEF 300
ASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEF
Sbjct: 241 ASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEF 300
Query: 301 GQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLA 360
GQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLA
Sbjct: 301 GQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLA 360
Query: 361 SQATKDGKKDKKEEDKK 377
SQATKDGKKDKKEEDKK
Sbjct: 361 SQATKDGKKDKKEEDKK 377
>gi|6681762 general transcription factor IIH, polypeptide 2, 44kD
subunit [Homo sapiens]
Length = 395
Score = 41.6 bits (96), Expect = 0.001
Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 5/143 (3%)
Query: 8 VCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLI-TLANDCEVLTTLTP 66
V VD S M + D P RL + NP + +G+I T + E LT L+
Sbjct: 63 VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 122
Query: 67 DTGR---ILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKD 123
+ + L K + G+ + + +A LKH G + +I F S + +
Sbjct: 123 NPRKHITSLKKAVDMTCHGEPSLYNSLSIAMQTLKHMPGHTSREVLIIF-SSLTTCDPSN 181
Query: 124 LVKLAKRLKKEKVNVDIINFGEE 146
+ L K LK K+ V +I E
Sbjct: 182 IYDLIKTLKAAKIRVSVIGLSAE 204
>gi|148922852 general transcription factor IIH, polypeptide 2C [Homo
sapiens]
Length = 395
Score = 40.8 bits (94), Expect = 0.002
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 5/143 (3%)
Query: 8 VCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLI-TLANDCEVLTTLTP 66
V VD S M + D P RL + NP + +G+I T + E LT L+
Sbjct: 63 VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 122
Query: 67 DTGRILSKLH---TVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKD 123
+ + ++ L + G+ + + +A LKH G + +I F S + +
Sbjct: 123 NPRKHITSLKEAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIF-SSLTTCDPSN 181
Query: 124 LVKLAKRLKKEKVNVDIINFGEE 146
+ L K LK K+ V +I E
Sbjct: 182 IYDLIKTLKAAKIRVSVIGLSAE 204
>gi|109809737 general transcription factor IIH, polypeptide 2D [Homo
sapiens]
Length = 395
Score = 40.8 bits (94), Expect = 0.002
Identities = 36/143 (25%), Positives = 59/143 (41%), Gaps = 5/143 (3%)
Query: 8 VCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLI-TLANDCEVLTTLTP 66
V VD S M + D P RL + NP + +G+I T + E LT L+
Sbjct: 63 VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 122
Query: 67 DTGRILSKLH---TVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKD 123
+ + ++ L + G+ + + +A LKH G + +I F S + +
Sbjct: 123 NPRKHITSLKEAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIF-SSLTTCDPSN 181
Query: 124 LVKLAKRLKKEKVNVDIINFGEE 146
+ L K LK K+ V +I E
Sbjct: 182 IYDLIKTLKAAKIRVSVIGLSAE 204
>gi|148922900 general transcription factor IIH, polypeptide 2B [Homo
sapiens]
Length = 395
Score = 38.9 bits (89), Expect = 0.008
Identities = 36/143 (25%), Positives = 57/143 (39%), Gaps = 5/143 (3%)
Query: 8 VCVDNSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENNVGLI-TLANDCEVLTTLTP 66
V VD S M + D P RL + NP + +G+I T + E LT L+
Sbjct: 63 VVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTELSG 122
Query: 67 DTGR---ILSKLHTVQPKGKITFCTGIRVAHLALKHRQGKNHKMRIIAFVGSPVEDNEKD 123
+ + L K + G+ + + +A LKH G + +I F S + +
Sbjct: 123 NPRKHITSLKKAVDMTCHGEPSLYNSLSMAMQTLKHMPGHTSREVLIIF-SSLTTCDPSN 181
Query: 124 LVKLAKRLKKEKVNVDIINFGEE 146
+ L K LK K+ V + E
Sbjct: 182 IYDLIKTLKAAKIRVSVTGLSAE 204
>gi|7669550 vinculin isoform meta-VCL [Homo sapiens]
Length = 1134
Score = 33.9 bits (76), Expect = 0.25
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 9/86 (10%)
Query: 284 EEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLP 343
+E ++ + + AE G A+ DA+ A P EDDY +PE L +P
Sbjct: 907 DEARKWSSKPGIPAAEVGIGVVAEADAADAAGFPVPPDMEDDY----EPELLL-----MP 957
Query: 344 GVDPNNEAIRNAMGSLASQATKDGKK 369
P N+ I A SL +ATK K
Sbjct: 958 SNQPVNQPILAAAQSLHREATKWSSK 983
>gi|4557509 cylicin 2 [Homo sapiens]
Length = 348
Score = 33.5 bits (75), Expect = 0.32
Identities = 18/68 (26%), Positives = 32/68 (47%)
Query: 310 ASSAMDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQATKDGKK 369
+S+ D+ + K+E D +D + + D +A +NA A K+ KK
Sbjct: 278 SSTDSDSKDDVKKESKKDATKDAKKVAKKDTEKESADSKKDAKKNAKKDAKKDAKKNAKK 337
Query: 370 DKKEEDKK 377
D+K++ KK
Sbjct: 338 DEKKDAKK 345
>gi|191252816 extracellular leucine-rich repeat and fibronectin type
III domain containing 1 [Homo sapiens]
Length = 828
Score = 32.0 bits (71), Expect = 0.94
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 30/154 (19%)
Query: 227 QRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQQEFG----RTGLPDLSS-- 280
+R+RQEE+ ++AA+A+AA + LK TI + ++G GL LS
Sbjct: 442 RRRRQEEKHKKAASAAAAGS--------------LKKTIIELKYGPELEAPGLAPLSQGP 487
Query: 281 MTEEEQIAYAMQMSLQG--AEFGQAESADIDASS-----AMDTSEPAKEEDDYDVMQDPE 333
+ E + + G ++ ESAD +S + T +P + D P+
Sbjct: 488 LLGPEAVTRIPYLPAAGEVEQYKLVESADTPKASKGSYMEVRTGDPPERRDCELGRPGPD 547
Query: 334 FLQSVLE---NLPGVDPNNEAIRNAMGSLASQAT 364
SV E VD N+ I N + +L S++T
Sbjct: 548 SQSSVAEISTIAKEVDKVNQIINNCIDALKSEST 581
>gi|157168372 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 8 [Homo sapiens]
Length = 725
Score = 32.0 bits (71), Expect = 0.94
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 12 NSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENN---VGLITLANDCEVLTTLTPDT 68
N + + N + +P LQ D+ NI+ + T + E N + T + +L+P+
Sbjct: 485 NGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEP 544
Query: 69 GRILSKLHTVQPK 81
+LS L + QPK
Sbjct: 545 THLLSSLSSFQPK 557
>gi|117956409 amyotrophic lateral sclerosis 2 (juvenile) chromosome
region, candidate 8 [Homo sapiens]
Length = 725
Score = 32.0 bits (71), Expect = 0.94
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 12 NSEYMRNGDFLPTRLQAQQDAVNIVCHSKTRSNPENN---VGLITLANDCEVLTTLTPDT 68
N + + N + +P LQ D+ NI+ + T + E N + T + +L+P+
Sbjct: 485 NGDTVYNSEIIPATLQWTTDSGNILKETMTVTFAEGNSPGESITTKVETNQTRGSLSPEP 544
Query: 69 GRILSKLHTVQPK 81
+LS L + QPK
Sbjct: 545 THLLSSLSSFQPK 557
>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 32.0 bits (71), Expect = 0.94
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 22/175 (12%)
Query: 208 VDPSADPELALALRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQ 267
V+P D + L EE+ Q + EEA AA + + DS S
Sbjct: 1211 VEPKED--MPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADS---------SN 1259
Query: 268 QEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEEDDYD 327
T P++ E+ +++ + S E Q E + + D + + DD+D
Sbjct: 1260 SPETETKEPEVEEEEEKPRVSEEQRQS----EEEQQELEEPEPEEEEDAAAETAQNDDHD 1315
Query: 328 V-MQDPEFLQSVLENLPGVDPNNEAIRNAMGSLAS------QATKDGKKDKKEED 375
+D L+S + P E ++ G S Q +++ KDK+E +
Sbjct: 1316 ADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETE 1370
>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 32.0 bits (71), Expect = 0.94
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 22/175 (12%)
Query: 208 VDPSADPELALALRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQ 267
V+P D + L EE+ Q + EEA AA + + DS S
Sbjct: 1211 VEPKED--MPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADS---------SN 1259
Query: 268 QEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEEDDYD 327
T P++ E+ +++ + S E Q E + + D + + DD+D
Sbjct: 1260 SPETETKEPEVEEEEEKPRVSEEQRQS----EEEQQELEEPEPEEEEDAAAETAQNDDHD 1315
Query: 328 V-MQDPEFLQSVLENLPGVDPNNEAIRNAMGSLAS------QATKDGKKDKKEED 375
+D L+S + P E ++ G S Q +++ KDK+E +
Sbjct: 1316 ADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETE 1370
>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
[Homo sapiens]
Length = 2004
Score = 32.0 bits (71), Expect = 0.94
Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 22/175 (12%)
Query: 208 VDPSADPELALALRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQ 267
V+P D + L EE+ Q + EEA AA + + DS S
Sbjct: 1211 VEPKED--MPLPEERKEEEEMQAEAEEAEEGEEEDAASSEVPAASPADS---------SN 1259
Query: 268 QEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEEDDYD 327
T P++ E+ +++ + S E Q E + + D + + DD+D
Sbjct: 1260 SPETETKEPEVEEEEEKPRVSEEQRQS----EEEQQELEEPEPEEEEDAAAETAQNDDHD 1315
Query: 328 V-MQDPEFLQSVLENLPGVDPNNEAIRNAMGSLAS------QATKDGKKDKKEED 375
+D L+S + P E ++ G S Q +++ KDK+E +
Sbjct: 1316 ADDEDDGHLESTKKKELEEQPTREDVKEEPGVQESFLDANMQKSREKIKDKEETE 1370
>gi|94538362 flotillin 2 [Homo sapiens]
Length = 428
Score = 32.0 bits (71), Expect = 0.94
Identities = 33/141 (23%), Positives = 61/141 (43%), Gaps = 13/141 (9%)
Query: 211 SADPELALALRVSMEEQRQRQEE------EARRAAAASAAEAGIATTGTEDSDDALLKMT 264
+A+ +LA L+ + E+Q+ RQEE + ++ A A E I T D L+
Sbjct: 234 TAEAQLAYELQGAREQQKIRQEEIEIEVVQRKKQIAVEAQE--ILRT-----DKELIATV 286
Query: 265 ISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEED 324
E + ++ + +Q+ A + + + G+AE+A I+A + + +
Sbjct: 287 RRPAEAEAHRIQQIAEGEKVKQVLLAQAEAEKIRKIGEAEAAVIEAMGKAEAERMKLKAE 346
Query: 325 DYDVMQDPEFLQSVLENLPGV 345
Y D + VLE LP +
Sbjct: 347 AYQKYGDAAKMALVLEALPQI 367
>gi|209862748 ataxin 3-like [Homo sapiens]
Length = 355
Score = 32.0 bits (71), Expect = 0.94
Identities = 23/118 (19%), Positives = 52/118 (44%), Gaps = 11/118 (9%)
Query: 228 RQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLSSMTEEEQI 287
+Q++ + + E+ + T +D +D + +S+QE R E+E +
Sbjct: 198 KQKEHRVYKTVLEKVSEESDESGTSDQDEEDFQRALELSRQETNR----------EDEHL 247
Query: 288 AYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEEDDY-DVMQDPEFLQSVLENLPG 344
+++S+QG+ ++ + + +P K ++DY + Q + Q +LPG
Sbjct: 248 RSTIELSMQGSSGNTSQDLPKTSCVTPASEQPKKIKEDYFEKHQQEQKQQQQQSDLPG 305
>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
Length = 2003
Score = 31.6 bits (70), Expect = 1.2
Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 27/295 (9%)
Query: 92 VAHLALKHRQGKNHKMRI---IAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIIN--FGEE 146
++ L ++G+ + R+ + V D E+ + A++L++ + ++ ++ E
Sbjct: 1265 LSSLQTARQEGEQRRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEA 1324
Query: 147 EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLADALISSPILAGEGGAMLGLGASDFEF 206
E T +L+ +++ + L+ LA + S + A E A + E
Sbjct: 1325 ESKTIRLSKELSSTEAQLHDAQELLQEETRAKLA---LGSRVRAMEAEAAGLREQLEEEA 1381
Query: 207 GVDPSADPELALALRVSMEEQRQRQEEEA------RRAAAASAAEAGIATTGTEDSDDAL 260
A EL A + + E R+RQEEEA A +A EA T + +
Sbjct: 1382 AARERAGRELQTA-QAQLSEWRRRQEEEAGALEAGEEARRRAAREAEALTQRLAEKTE-- 1438
Query: 261 LKMTISQQEFGRTGLP---DLSSMTEEEQIAYAMQMSLQGAEFGQ----AESADIDASSA 313
T+ + E GR L D ++M E+Q + + +F Q ++A + A
Sbjct: 1439 ---TVDRLERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQLLAEEKAAVLRAVEE 1495
Query: 314 MDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQATKDGK 368
+ +E E + + L+ E ++ N A+R + +L S GK
Sbjct: 1496 RERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKDDVGK 1550
>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
Length = 1995
Score = 31.6 bits (70), Expect = 1.2
Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 27/295 (9%)
Query: 92 VAHLALKHRQGKNHKMRI---IAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIIN--FGEE 146
++ L ++G+ + R+ + V D E+ + A++L++ + ++ ++ E
Sbjct: 1257 LSSLQTARQEGEQRRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEA 1316
Query: 147 EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLADALISSPILAGEGGAMLGLGASDFEF 206
E T +L+ +++ + L+ LA + S + A E A + E
Sbjct: 1317 ESKTIRLSKELSSTEAQLHDAQELLQEETRAKLA---LGSRVRAMEAEAAGLREQLEEEA 1373
Query: 207 GVDPSADPELALALRVSMEEQRQRQEEEA------RRAAAASAAEAGIATTGTEDSDDAL 260
A EL A + + E R+RQEEEA A +A EA T + +
Sbjct: 1374 AARERAGRELQTA-QAQLSEWRRRQEEEAGALEAGEEARRRAAREAEALTQRLAEKTE-- 1430
Query: 261 LKMTISQQEFGRTGLP---DLSSMTEEEQIAYAMQMSLQGAEFGQ----AESADIDASSA 313
T+ + E GR L D ++M E+Q + + +F Q ++A + A
Sbjct: 1431 ---TVDRLERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQLLAEEKAAVLRAVEE 1487
Query: 314 MDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQATKDGK 368
+ +E E + + L+ E ++ N A+R + +L S GK
Sbjct: 1488 RERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKDDVGK 1542
>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
Length = 2036
Score = 31.6 bits (70), Expect = 1.2
Identities = 61/295 (20%), Positives = 117/295 (39%), Gaps = 27/295 (9%)
Query: 92 VAHLALKHRQGKNHKMRI---IAFVGSPVEDNEKDLVKLAKRLKKEKVNVDIIN--FGEE 146
++ L ++G+ + R+ + V D E+ + A++L++ + ++ ++ E
Sbjct: 1298 LSSLQTARQEGEQRRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEA 1357
Query: 147 EVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLADALISSPILAGEGGAMLGLGASDFEF 206
E T +L+ +++ + L+ LA + S + A E A + E
Sbjct: 1358 ESKTIRLSKELSSTEAQLHDAQELLQEETRAKLA---LGSRVRAMEAEAAGLREQLEEEA 1414
Query: 207 GVDPSADPELALALRVSMEEQRQRQEEEA------RRAAAASAAEAGIATTGTEDSDDAL 260
A EL A + + E R+RQEEEA A +A EA T + +
Sbjct: 1415 AARERAGRELQTA-QAQLSEWRRRQEEEAGALEAGEEARRRAAREAEALTQRLAEKTE-- 1471
Query: 261 LKMTISQQEFGRTGLP---DLSSMTEEEQIAYAMQMSLQGAEFGQ----AESADIDASSA 313
T+ + E GR L D ++M E+Q + + +F Q ++A + A
Sbjct: 1472 ---TVDRLERGRRRLQQELDDATMDLEQQRQLVSTLEKKQRKFDQLLAEEKAAVLRAVEE 1528
Query: 314 MDTSEPAKEEDDYDVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQATKDGK 368
+ +E E + + L+ E ++ N A+R + +L S GK
Sbjct: 1529 RERAEAEGREREARALSLTRALEEEQEAREELERQNRALRAELEALLSSKDDVGK 1583
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 31.6 bits (70), Expect = 1.2
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 220 LRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLS 279
L+ S+EE +Q QE A + AA EA +A ED+ L K + ++ T + +L
Sbjct: 323 LKNSLEEAKQ-QERLAAQQAAQCKEEAALAGCHLEDTQRKLQKGLLLDKQKADT-IQELQ 380
Query: 280 SMTEEEQIAYAMQMSLQGAEFGQAESADIDASSA---MDTSEPAKEEDDYDVMQDPEFLQ 336
+ Q +M Q + + E ++ S A ++ S+ K + V + +
Sbjct: 381 RELQMLQKESSMAEKEQTSNRKRVEELSLELSEALRKLENSDKEKRQLQKTVAEQDMKMN 440
Query: 337 SVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKK 377
+L+ + +I+ + +ATK +DK+E+ KK
Sbjct: 441 DMLDRIKHQHREQGSIKCKLEEDLQEATK-LLEDKREQLKK 480
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 31.6 bits (70), Expect = 1.2
Identities = 38/161 (23%), Positives = 71/161 (44%), Gaps = 6/161 (3%)
Query: 220 LRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLS 279
L+ S+EE +Q QE A + AA EA +A ED+ L K + ++ T + +L
Sbjct: 468 LKNSLEEAKQ-QERLAAQQAAQCKEEAALAGCHLEDTQRKLQKGLLLDKQKADT-IQELQ 525
Query: 280 SMTEEEQIAYAMQMSLQGAEFGQAESADIDASSA---MDTSEPAKEEDDYDVMQDPEFLQ 336
+ Q +M Q + + E ++ S A ++ S+ K + V + +
Sbjct: 526 RELQMLQKESSMAEKEQTSNRKRVEELSLELSEALRKLENSDKEKRQLQKTVAEQDMKMN 585
Query: 337 SVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKK 377
+L+ + +I+ + +ATK +DK+E+ KK
Sbjct: 586 DMLDRIKHQHREQGSIKCKLEEDLQEATK-LLEDKREQLKK 625
>gi|21361348 UTP14, U3 small nucleolar ribonucleoprotein, homolog A
[Homo sapiens]
Length = 771
Score = 31.6 bits (70), Expect = 1.2
Identities = 38/160 (23%), Positives = 66/160 (41%), Gaps = 23/160 (14%)
Query: 222 VSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLSSM 281
V+ EE R+ EE R S G++++ D+ + +S+ L LS
Sbjct: 414 VAEEEILLREFEERRSLRKRSELSQDAEPAGSQETKDSGSQEVLSE-------LRVLSQK 466
Query: 282 TEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEEDDYDVMQDPEFLQSV--L 339
+E + + S +G + EPA EE++ ++Q PE +Q++ L
Sbjct: 467 LKENHQSRKQKASSEGT------------IPQVQREEPAPEEEEPLLLQRPERVQTLEEL 514
Query: 340 ENLPGVD--PNNEAIRNAMGSLASQATKDGKKDKKEEDKK 377
E L + N E R + S+ T + + D +E KK
Sbjct: 515 EELGKEECFQNKELPRPVLEGQQSERTPNNRPDAPKEKKK 554
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 31.2 bits (69), Expect = 1.6
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 19/114 (16%)
Query: 184 ISSPILAGEGGAMLGLGASDFEFGVDPSADPELALALRVSMEEQRQRQE----------- 232
I+SP+ E G+G+S + + DP ++ + +E+QRQRQ
Sbjct: 2638 ITSPVEKREDPGT-GMGSSLATAELPGTQDPGMSGLSQTELEKQRQRQRLRELLIRQQIQ 2696
Query: 233 -----EEARRAAAASAAEAGIATTGTEDSDDALLKMTISQQEFGRTGLPDLSSM 281
+E AAAA+ A + G E S A +++ Q F G D SS+
Sbjct: 2697 RNTLRQEKETAAAAAGAVGPPGSWGAEPSSPAFEQLSRGQTPF--AGTQDKSSL 2748
>gi|134133288 zinc finger protein 407 isoform 1 [Homo sapiens]
Length = 2248
Score = 31.2 bits (69), Expect = 1.6
Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 166 TGSHLVTVPPGPSLADALISSPI-LAGEGGAMLGLGASDFEFGVDPSADPELALALRVSM 224
+G+H+ +V PGP L + L + GG+M G G+D S P A+ +V+
Sbjct: 1917 SGAHVGSVVPGPILPEQLADGATQVVVVGGSMEG-------HGMDESLSPGGAVIQQVTK 1969
Query: 225 EEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALL-KMTISQQEFGRTGLPD 277
+E + +EAG+A + DALL +T + GR GL +
Sbjct: 1970 QE-------------ILNLSEAGVAPPEASSALDALLCAVTELGEVEGRAGLEE 2010
>gi|94536811 NEDD4-like ubiquitin-protein ligase 1 [Homo sapiens]
Length = 1606
Score = 31.2 bits (69), Expect = 1.6
Identities = 53/221 (23%), Positives = 80/221 (36%), Gaps = 21/221 (9%)
Query: 162 GKDGTGSHLVTVP----PGPSLADALISSPILAGEGGAMLGLGASDFEFGVDPSADP--- 214
G +G G L V P PS A+ L L E A+L D E +P
Sbjct: 434 GPEGAGELLAQVQKDIQPAPS-AEELAEQLDLGEEASALL---LEDGEAPASTKEEPLEE 489
Query: 215 ELALALRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQQEF---G 271
E R EE+ + QEEE + E + + + +S+ E
Sbjct: 490 EATTQSRAGREEEEKEQEEEGD-VSTLEQGEGRLQLRASVKRKSRPCSLPVSELETVIAS 548
Query: 272 RTGLPDL--SSMTEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAKEEDDYDVM 329
G P+ + + ++M S QG + E + S+ D+SE + V
Sbjct: 549 ACGDPETPRTHYIRIHTLLHSMP-SAQGGSAAEEEDGAEEESTLKDSSEKDGLSEVDTVA 607
Query: 330 QDPEFLQSVLENLPGVDPNNEAIRNAMG---SLASQATKDG 367
DP L+ E G P ++ G SLA+ A +DG
Sbjct: 608 ADPSALEEDREEPEGATPGTAHPGHSGGHFPSLANGAAQDG 648
>gi|94536805 splicing factor YT521-B isoform 2 [Homo sapiens]
Length = 709
Score = 31.2 bits (69), Expect = 1.6
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 210 PSADPELALALRVSMEEQRQRQ--EEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQ 267
P+ D + L V R Q +EE S E TG+ S D T ++
Sbjct: 147 PTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHE-----TGSSGSSDEQGNNTENE 201
Query: 268 QEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAK-EEDDY 326
+E G+ + + E+E++ + + E G+ E + + + E + E+D+
Sbjct: 202 EE----GVEE--DVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDER 255
Query: 327 DVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKK 377
D ++ + E D +E++ GS+ S + DG +KK+E K+
Sbjct: 256 DQKEEGNDYDTRSE---ASDSGSESVSFTDGSVRSGSGTDGSDEKKKERKR 303
>gi|72534750 splicing factor YT521-B isoform 1 [Homo sapiens]
Length = 727
Score = 31.2 bits (69), Expect = 1.6
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 17/171 (9%)
Query: 210 PSADPELALALRVSMEEQRQRQ--EEEARRAAAASAAEAGIATTGTEDSDDALLKMTISQ 267
P+ D + L V R Q +EE S E TG+ S D T ++
Sbjct: 147 PTPDGSERIGLEVDRRASRSSQSSKEEVNSEEYGSDHE-----TGSSGSSDEQGNNTENE 201
Query: 268 QEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAK-EEDDY 326
+E G+ + + E+E++ + + E G+ E + + + E + E+D+
Sbjct: 202 EE----GVEE--DVEEDEEVEEDAEEDEEVDEDGEEEEEEEEEEEEEEEEEEEEYEQDER 255
Query: 327 DVMQDPEFLQSVLENLPGVDPNNEAIRNAMGSLASQATKDGKKDKKEEDKK 377
D ++ + E D +E++ GS+ S + DG +KK+E K+
Sbjct: 256 DQKEEGNDYDTRSE---ASDSGSESVSFTDGSVRSGSGTDGSDEKKKERKR 303
>gi|63252908 IQ motif and WD repeats 1 isoform a [Homo sapiens]
Length = 880
Score = 30.8 bits (68), Expect = 2.1
Identities = 44/236 (18%), Positives = 81/236 (34%), Gaps = 26/236 (11%)
Query: 146 EEVNTEKLTAFVNTLNGKDGTGSHLVTVPPGPSLADALISSPI----LAGEGGAMLGLGA 201
+E+ + ++ + KD T L T P + L P+ L G+
Sbjct: 266 QEILVSYSSDYIYLFDPKDDTARELKT-PSAEERREELRQPPVKRLRLRGDWSDTGPRAR 324
Query: 202 SDFEFGVDPSADPELALALRVSMEEQRQRQEEEARRAAAASAAEAGIATTGTEDSDDALL 261
+ E D P ++L R+S + R EEA A ++ G D
Sbjct: 325 PESERERDGEQSPNVSLMQRMS--DMLSRWFEEASEVAQSNRGRGRSRPRGGTSQSDI-- 380
Query: 262 KMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQAESADIDASSAMDTSEPAK 321
+ LP + S + E AM++ +F Q ++ ++ A TS P +
Sbjct: 381 -----------STLPTVPSSPDLEVSETAMEVDTPAEQFLQPSTSSTMSAQAHSTSSPTE 429
Query: 322 EEDDYDVMQDPEFLQSVLENLPG------VDPNNEAIRNAMGSLASQATKDGKKDK 371
++ P+ Q G D + + +GS++ +D +K
Sbjct: 430 SPHSTPLLSSPDSEQRQSVEASGHHTHHQSDSPSSVVNKQLGSMSLDEQQDNNNEK 485
>gi|224809466 anthrax toxin receptor 2 isoform 2 [Homo sapiens]
Length = 489
Score = 30.8 bits (68), Expect = 2.1
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 44 NPENNVGLITLANDCEVLTTLTPDTGRI---LSKLHTVQPKGKITFCTGIRVAHLALKHR 100
+PE + I ++ ++ LT D G+I L L V P G+ G+++A+ ++
Sbjct: 75 SPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKA 134
Query: 101 QGKNHKMRIIAFVGSPVED-----NEKDLVKLAKRLKKEKVNVDIINFGEEEV 148
G IIA ++ EK+ K+++ L V +++F + ++
Sbjct: 135 GGLKTSSIIIALTDGKLDGLVPSYAEKE-AKISRSLGASVYCVGVLDFEQAQL 186
>gi|50513243 anthrax toxin receptor 2 isoform 1 [Homo sapiens]
Length = 488
Score = 30.8 bits (68), Expect = 2.1
Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 9/113 (7%)
Query: 44 NPENNVGLITLANDCEVLTTLTPDTGRI---LSKLHTVQPKGKITFCTGIRVAHLALKHR 100
+PE + I ++ ++ LT D G+I L L V P G+ G+++A+ ++
Sbjct: 75 SPEMRLSFIVFSSQATIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKA 134
Query: 101 QGKNHKMRIIAFVGSPVED-----NEKDLVKLAKRLKKEKVNVDIINFGEEEV 148
G IIA ++ EK+ K+++ L V +++F + ++
Sbjct: 135 GGLKTSSIIIALTDGKLDGLVPSYAEKE-AKISRSLGASVYCVGVLDFEQAQL 186
>gi|21264355 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin e1 [Homo sapiens]
Length = 411
Score = 30.8 bits (68), Expect = 2.1
Identities = 33/142 (23%), Positives = 52/142 (36%), Gaps = 23/142 (16%)
Query: 207 GVDPSADPELALALRVSMEEQRQRQEEEARRAAAASA---------AEAGIATTGTEDSD 257
G+ D E A EEQ ++++EE + AA A E A G E D
Sbjct: 275 GLKVEVDMEKIAAEIAQAEEQARKRQEEREKEAAEQAERSQSSIVPEEEQAANKGEEKKD 334
Query: 258 DALLKMTISQQEFGRTGLPDLSSMTEEEQIAYAMQMSLQGAEFGQ------AESADIDAS 311
D + M + L TE +Q + + E GQ AE D++
Sbjct: 335 DENIPMETEETH--------LEETTESQQNGEEGTSTPEDKESGQEGVDSMAEEGTSDSN 386
Query: 312 SAMDTSEPAKEEDDYDVMQDPE 333
+ +++ EE D + + E
Sbjct: 387 TGSESNSATVEEPPTDPIPEDE 408
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,085,588
Number of Sequences: 37866
Number of extensions: 637337
Number of successful extensions: 2511
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 2431
Number of HSP's gapped (non-prelim): 160
length of query: 377
length of database: 18,247,518
effective HSP length: 104
effective length of query: 273
effective length of database: 14,309,454
effective search space: 3906480942
effective search space used: 3906480942
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.