Guide to the Human Genome
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Name: ZNF146 Sequence: fasta or formatted (292aa) NCBI GI: 153791570
Description:

zinc finger protein 146

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt mRNA [292aa] zinc finger protein 146
alt mRNA [292aa] zinc finger protein 146
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.1          9           1
 C cysteine            6.8         20           1
 D aspartate           0.7          2           1
 E glutamate           8.6         25           1
 F phenylalanine       6.2         18           1
 G glycine             7.5         22           1
 H histidine           8.9         26           2
 I isoleucine          4.8         14           1
 K lysine             12.3         36           2
 L leucine             4.5         13           2
 M methionine          0.3          1           1
 N asparagine          4.1         12           1
 P proline             3.1          9           1
 Q glutamine           5.8         17           2
 R arginine            3.1          9           1
 S serine              8.6         25           3
 T threonine           6.2         18           1
 V valine              3.1          9           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.4          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 146 
ZNF146                1.000   zinc finger protein 146 
ZNF146                1.000   zinc finger protein 146 
ZNF260                0.829   zinc finger protein 260 
ZNF569                0.673   zinc finger protein 569 
ZNF167                0.649   zinc finger protein 167 isoform 1 
ZNF568                0.635   zinc finger protein 568 
ZNF135                0.629   zinc finger protein 135 
ZNF852                0.627   PREDICTED: zinc finger protein 852 
ZNF852                0.627   PREDICTED: zinc finger protein 852 
ZNF300                0.627   zinc finger protein 300 
LOC100287429          0.624   PREDICTED: hypothetical protein XP_002343926 isofor...
LOC100287429          0.624   PREDICTED: hypothetical protein XP_002343925 isofor...
LOC100287429          0.624   PREDICTED: hypothetical protein XP_002343927 isofor...
ZNF84                 0.624   zinc finger protein 84 
ZNF84                 0.624   zinc finger protein 84 
ZNF470                0.624   zinc finger protein 470 
ZFP2                  0.612   zinc finger protein 2 homolog 
ZNF16                 0.612   zinc finger protein 16 
ZNF16                 0.612   zinc finger protein 16 
ZFP37                 0.611   zinc finger protein 37 homolog 
ZNF420                0.609   zinc finger protein 420 
ZNF383                0.609   zinc finger protein 383 
ZNF79                 0.608   zinc finger protein 79 
ZNF484                0.608   zinc finger protein 484 isoform b 
ZNF484                0.608   zinc finger protein 484 isoform a 
ZNF665                0.608   zinc finger protein 665 
LOC647678             0.606   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.606   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.606   PREDICTED: hypothetical protein XP_002343697 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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