Guide to the Human Genome
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Name: PLEKHG7 Sequence: fasta or formatted (379aa) NCBI GI: 51972240
Description:

pleckstrin homology domain containing, family G (with RhoGef domain) member 7

Referenced in:

NF-kappaB Pathway

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         16           2
 C cysteine            2.6         10           1
 D aspartate           4.5         17           2
 E glutamate           6.9         26           2
 F phenylalanine       5.8         22           2
 G glycine             3.2         12           2
 H histidine           2.1          8           1
 I isoleucine          7.1         27           2
 K lysine              7.4         28           3
 L leucine            14.2         54           3
 M methionine          1.8          7           1
 N asparagine          3.4         13           1
 P proline             3.7         14           2
 Q glutamine           4.7         18           1
 R arginine            5.3         20           2
 S serine              7.4         28           3
 T threonine           5.5         21           2
 V valine              4.5         17           2
 W tryptophan          1.8          7           1
 Y tyrosine            3.7         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleckstrin homology domain containing, family G (wit... 
PLEKHG5               0.103   pleckstrin homology domain containing family G membe...
PLEKHG5               0.103   pleckstrin homology domain containing family G memb...
PLEKHG5               0.103   pleckstrin homology domain containing family G memb...
PLEKHG5               0.103   pleckstrin homology domain containing family G memb...
PLEKHG5               0.103   pleckstrin homology domain containing family G memb...
PLEKHG6               0.092   pleckstrin homology domain-containing family G memb...
PLEKHG6               0.092   pleckstrin homology domain-containing family G memb...
PLEKHG6               0.092   pleckstrin homology domain-containing family G memb...
ITSN1                 0.063   intersectin 1 isoform ITSN-l 
ARHGEF11              0.058   Rho guanine nucleotide exchange factor (GEF) 11 isof...
ARHGEF11              0.058   Rho guanine nucleotide exchange factor (GEF) 11 isofo...
ARHGEF12              0.055   Rho guanine nucleotide exchange factor (GEF) 12 [Homo...
ITSN2                 0.049   intersectin 2 isoform 3 
ITSN2                 0.049   intersectin 2 isoform 1 
SGEF                  0.047   Src homology 3 domain-containing guanine nucleotide...
RGNEF                 0.043   Rho-guanine nucleotide exchange factor 
ARHGEF1               0.039   Rho guanine nucleotide exchange factor 1 isoform 1 [...
ARHGEF1               0.039   Rho guanine nucleotide exchange factor 1 isoform 3 [...
ARHGEF1               0.039   Rho guanine nucleotide exchange factor 1 isoform 2 [...
FLJ41603              0.039   hypothetical protein LOC389337 
ARHGEF5               0.039   rho guanine nucleotide exchange factor 5 
NGEF                  0.035   neuronal guanine nucleotide exchange factor isoform...
NGEF                  0.035   neuronal guanine nucleotide exchange factor isoform...
VAV1                  0.034   vav 1 guanine nucleotide exchange factor 
VAV2                  0.034   vav 2 guanine nucleotide exchange factor isoform 1 ...
ARHGEF16              0.032   Rho guanine exchange factor 16 
ARHGEF3               0.031   Rho guanine nucleotide exchange factor 3 isoform 2 ...
ARHGEF3               0.031   Rho guanine nucleotide exchange factor 3 isoform 1 ...
ARHGEF3               0.031   Rho guanine nucleotide exchange factor 3 isoform 3 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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