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Search of human proteins with 5174715
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5174715 transcription factor-like 1 [Homo sapiens]
(364 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174715 transcription factor-like 1 [Homo sapiens] 742 0.0
gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens] 49 7e-06
gi|194272142 myosin IXB isoform 2 [Homo sapiens] 46 5e-05
gi|33356170 myosin IXB isoform 1 [Homo sapiens] 46 5e-05
gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo... 45 1e-04
gi|187173290 troponin T1, skeletal, slow isoform b [Homo sapiens] 42 7e-04
gi|187173288 troponin T1, skeletal, slow isoform a [Homo sapiens] 42 7e-04
gi|87299628 biorientation of chromosomes in cell division 1-like... 42 9e-04
gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens] 40 0.003
gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens] 40 0.003
gi|145580615 KRI1 homolog [Homo sapiens] 39 0.007
gi|161702986 ezrin [Homo sapiens] 39 0.010
gi|21614499 ezrin [Homo sapiens] 39 0.010
gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo sa... 39 0.010
gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo sa... 39 0.010
gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo sa... 39 0.010
gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo sap... 39 0.010
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 39 0.010
gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens] 39 0.010
gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I... 39 0.010
gi|21361077 calcium channel, voltage-dependent, T type, alpha 1I... 39 0.010
gi|102467235 inner centromere protein antigens 135/155kDa isofor... 39 0.010
gi|102467242 inner centromere protein antigens 135/155kDa isofor... 39 0.010
gi|29244924 chromodomain helicase DNA binding protein 6 [Homo sa... 38 0.012
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)... 38 0.016
gi|9994179 transcriptional regulator protein [Homo sapiens] 38 0.016
gi|93587342 voltage-gated sodium channel type 4 alpha [Homo sapi... 38 0.016
gi|17975763 myelin transcription factor 1 [Homo sapiens] 38 0.016
gi|21237805 SWI/SNF-related matrix-associated actin-dependent re... 38 0.016
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa... 37 0.021
>gi|5174715 transcription factor-like 1 [Homo sapiens]
Length = 364
Score = 742 bits (1916), Expect = 0.0
Identities = 364/364 (100%), Positives = 364/364 (100%)
Query: 1 MSLAGGRAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSD 60
MSLAGGRAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSD
Sbjct: 1 MSLAGGRAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSD 60
Query: 61 FDIDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPL 120
FDIDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPL
Sbjct: 61 FDIDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPL 120
Query: 121 ELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITE 180
ELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITE
Sbjct: 121 ELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITE 180
Query: 181 ELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVDIEGLDPA 240
ELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVDIEGLDPA
Sbjct: 181 ELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEENVDIEGLDPA 240
Query: 241 PSVSALTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPPKVPVREVCPVTHRPAL 300
PSVSALTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPPKVPVREVCPVTHRPAL
Sbjct: 241 PSVSALTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPPKVPVREVCPVTHRPAL 300
Query: 301 YRDPVTDIPYATARAFKIIREAYKKYITAHGLPPTASALGPGPPPPEPLPGSGPRALRQK 360
YRDPVTDIPYATARAFKIIREAYKKYITAHGLPPTASALGPGPPPPEPLPGSGPRALRQK
Sbjct: 301 YRDPVTDIPYATARAFKIIREAYKKYITAHGLPPTASALGPGPPPPEPLPGSGPRALRQK 360
Query: 361 IVIK 364
IVIK
Sbjct: 361 IVIK 364
>gi|24497618 ATPase family, AAA domain containing 2 [Homo sapiens]
Length = 1390
Score = 48.9 bits (115), Expect = 7e-06
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 14/101 (13%)
Query: 7 RAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEG 66
R +T N+ G +E+ EE E + E+ G+DE D+ D +D+ D D D DE
Sbjct: 229 RTDEETTDNQ-EGSVESSEEGEDQEH------EDDGEDE--DDEDDDDDDDDDDDDDDED 279
Query: 67 DEPSSDGEAEEPRR---KRRVVTKAYKEPLKSLRPRKVNTP 104
DE DGE E +R ++R T Y+ PL+ +PR P
Sbjct: 280 DEDEEDGEEENQKRYYLRQRKATVYYQAPLE--KPRHQRKP 318
>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
Length = 2022
Score = 46.2 bits (108), Expect = 5e-05
Identities = 65/269 (24%), Positives = 101/269 (37%), Gaps = 31/269 (11%)
Query: 2 SLAGGRAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDF 61
SL G RK+ +S +AEE++ EE G + G Q E
Sbjct: 1033 SLCRGHLQRKSFSQMISEKQKAEEKEREALEAARAGAEEGGQGQAAGGQQVAE------- 1085
Query: 62 DIDEGDEPSSDGE--AEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLP 119
+G EP+ DG A EP V + + PL+ P K + ++ A
Sbjct: 1086 ---QGPEPAEDGGHLASEPE-----VQPSDRSPLEHSSPEKEAPSPEKTLPPQKTVAAES 1137
Query: 120 LELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEE---LLREA 176
E + R+S RQ EH + +Q + +S R+ R +TQE+ LL +
Sbjct: 1138 HEKVPSSREKRESRRQRGLEHVKFQNKHIQSCKEESALREP---SRRVTQEQGVSLLEDK 1194
Query: 177 KIT-EELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEEN---- 231
K + E+ L +ET + K+ + G + T+P G P P +
Sbjct: 1195 KESREDETLLVVETEAENTSQKQPTEQPQAMAVGKVSEETEKTLP-SGSPRPGQLERPTS 1253
Query: 232 --VDIEGLDPAPSVSALTPHAGTGPVNPP 258
+D PAP + TP + P P
Sbjct: 1254 LALDSRVSPPAPGSAPETPEDKSKPCGSP 1282
>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
Length = 2157
Score = 46.2 bits (108), Expect = 5e-05
Identities = 65/269 (24%), Positives = 101/269 (37%), Gaps = 31/269 (11%)
Query: 2 SLAGGRAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDF 61
SL G RK+ +S +AEE++ EE G + G Q E
Sbjct: 1033 SLCRGHLQRKSFSQMISEKQKAEEKEREALEAARAGAEEGGQGQAAGGQQVAE------- 1085
Query: 62 DIDEGDEPSSDGE--AEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLP 119
+G EP+ DG A EP V + + PL+ P K + ++ A
Sbjct: 1086 ---QGPEPAEDGGHLASEPE-----VQPSDRSPLEHSSPEKEAPSPEKTLPPQKTVAAES 1137
Query: 120 LELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEE---LLREA 176
E + R+S RQ EH + +Q + +S R+ R +TQE+ LL +
Sbjct: 1138 HEKVPSSREKRESRRQRGLEHVKFQNKHIQSCKEESALREP---SRRVTQEQGVSLLEDK 1194
Query: 177 KIT-EELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGEPGPKEEN---- 231
K + E+ L +ET + K+ + G + T+P G P P +
Sbjct: 1195 KESREDETLLVVETEAENTSQKQPTEQPQAMAVGKVSEETEKTLP-SGSPRPGQLERPTS 1253
Query: 232 --VDIEGLDPAPSVSALTPHAGTGPVNPP 258
+D PAP + TP + P P
Sbjct: 1254 LALDSRVSPPAPGSAPETPEDKSKPCGSP 1282
>gi|94681063 bromodomain adjacent to zinc finger domain, 2B [Homo
sapiens]
Length = 2168
Score = 45.1 bits (105), Expect = 1e-04
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 9/132 (6%)
Query: 22 EAEEEDEFYQTTYGGFTEESGDDEYQGD---QSDTEDEVDSDFDIDEGDEPSSDGEAEEP 78
E EEED+ + +ES D + + D +SDTE + D D + DE SD E E+
Sbjct: 609 EDEEEDDEEEDEEDDEDDESDDSQSESDSNSESDTEGSEEEDDDDKDQDESDSDTEGEKT 668
Query: 79 RRKRRVVTKAYKEPLKSL----RPRKVN--TPAGSSQKAREEKALLPLELQDDGSDSRKS 132
K T + K P SL PR ++ GS+ A ++ P L S S
Sbjct: 669 SMKLNKTTSSVKSPSMSLTGHSTPRNLHIAKAPGSAPAALCSESQSPAFLGTSSSTLTSS 728
Query: 133 MRQSTAEHTRQT 144
T++ R T
Sbjct: 729 PHSGTSKRRRVT 740
Score = 31.2 bits (69), Expect = 1.5
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 10 RKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGDEP 69
+KT SG ++ EE T G +G SD +D+ D D D D+GDE
Sbjct: 1261 KKTGKRDTSGGIDLGEEQHPLGTPTPGRKRRR-----KGGDSDYDDDDDDDSD-DQGDED 1314
Query: 70 SSDGEAEEPRRKRR 83
D E +E ++ ++
Sbjct: 1315 DEDEEDKEDKKGKK 1328
Score = 30.0 bits (66), Expect = 3.4
Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 11/174 (6%)
Query: 22 EAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTE-DEVDSDFDIDEGDEPSSDGEAE-EPR 79
+A E + G ++ S + D D E DE + D I+E ++ SD E+E + +
Sbjct: 237 KAMESSSNSDSDSGTSSDTSSEGISSSDSDDLEEDEEEEDQSIEESEDDDSDSESEAQHK 296
Query: 80 RKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQSTAE 139
+V+ +P + +++KA+E++ PL L + +Q +
Sbjct: 297 SNNQVLLHGISDPKADGQK--------ATEKAQEKRIHQPLPLASESQTHSFQSQQKQPQ 348
Query: 140 HTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITEELNLRSLETYERL 193
Q + + H + L+ K +N ETY +L
Sbjct: 349 VLSQQLPFIFQSSQAKEESVNKHTS-VIQSTGLVSNVKPLSLVNQAKKETYMKL 401
>gi|187173290 troponin T1, skeletal, slow isoform b [Homo sapiens]
Length = 262
Score = 42.4 bits (98), Expect = 7e-04
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 16/163 (9%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPR 99
++ + EY+ +Q + E+ + + + E EP ++ E E P+ R VV + P
Sbjct: 3 DTEEQEYEEEQPE-EEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKI----PE 57
Query: 100 KVNTPAGSSQKAREEKALLPLE-LQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRR 158
+ R EK LL L+ L D + RK + + R ER Q R R
Sbjct: 58 GERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFR 117
Query: 159 KGPHCERPLTQEELLREAKITEE-LNLRSLETYERLEADKKKQ 200
T++E R+AK+ EE + E +R E D KK+
Sbjct: 118 ---------TEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKK 151
>gi|187173288 troponin T1, skeletal, slow isoform a [Homo sapiens]
Length = 278
Score = 42.4 bits (98), Expect = 7e-04
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 16/163 (9%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPR 99
++ + EY+ +Q + E+ + + + E EP ++ E E P+ R VV + P
Sbjct: 3 DTEEQEYEEEQPE-EEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKI----PE 57
Query: 100 KVNTPAGSSQKAREEKALLPLE-LQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRR 158
+ R EK LL L+ L D + RK + + R ER Q R R
Sbjct: 58 GERVDFDDIHRKRMEKDLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAEQQRFR 117
Query: 159 KGPHCERPLTQEELLREAKITEE-LNLRSLETYERLEADKKKQ 200
T++E R+AK+ EE + E +R E D KK+
Sbjct: 118 ---------TEKERERQAKLAEEKMRKEEEEAKKRAEDDAKKK 151
>gi|87299628 biorientation of chromosomes in cell division 1-like
[Homo sapiens]
Length = 3051
Score = 42.0 bits (97), Expect = 9e-04
Identities = 50/216 (23%), Positives = 90/216 (41%), Gaps = 27/216 (12%)
Query: 7 RAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQS----DTEDEVDSDFD 62
+ P + N+ + +E+ + G T+ + + D S DTE+EV +
Sbjct: 373 KLPSEKNSNKAKTVEGTKEDFSLIDSDVDGLTDITVSSVHTSDLSSFEEDTEEEVVTSDS 432
Query: 63 IDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPLEL 122
++EG+ S D E + + + + + + KS+R V+ P S+ + L +E
Sbjct: 433 MEEGEITSDDEEKNKQNKTKTQTSDSSEGKTKSVRHAYVHKPYLYSKYYSDSDDELTVE- 491
Query: 123 QDDGSDSRKSMRQSTAEHTRQTFLRVQ---ERQGQSRRRKGPHCERPLTQEELLREAKIT 179
RQS A+ + LR Q E+ + R++K + T+ + R +
Sbjct: 492 ---------QRRQSIAKEKEERLLRRQINREKLEEKRKQKAEKTKSSKTKGQ-GRSSVDL 541
Query: 180 EELNLRSLE---------TYERLEADKKKQVHKKRK 206
EE + +SLE ER +KK + KKRK
Sbjct: 542 EESSTKSLEPKAARIKEVLKERKVLEKKVALSKKRK 577
Score = 31.2 bits (69), Expect = 1.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Query: 333 PPTASALGPGPPPPEPLPGSGPRA 356
PP P PPPP P PG+GP A
Sbjct: 15 PPPPPQPQPQPPPPPPGPGAGPGA 38
>gi|217330570 EH domain binding protein 1 isoform 2 [Homo sapiens]
Length = 1196
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSS-DGEAEEPRRKRRVVTKAYKEPLKSLRP 98
++ DE + DT +E+ F + GDE ++ + + + P + ++V K+ L ++P
Sbjct: 866 KASGDENDNIEIDTNEEIPEGFVVGGGDELTNLENDLDTPEQNSKLVDLKLKK-LLEVQP 924
Query: 99 RKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTR 142
+ N+P+ ++QKA E + +++ D R Q T E R
Sbjct: 925 QVANSPSSAAQKAVTESS--EQDMKSGTEDLRTERLQKTTERFR 966
>gi|217330568 EH domain binding protein 1 isoform 1 [Homo sapiens]
Length = 1231
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSS-DGEAEEPRRKRRVVTKAYKEPLKSLRP 98
++ DE + DT +E+ F + GDE ++ + + + P + ++V K+ L ++P
Sbjct: 901 KASGDENDNIEIDTNEEIPEGFVVGGGDELTNLENDLDTPEQNSKLVDLKLKK-LLEVQP 959
Query: 99 RKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTR 142
+ N+P+ ++QKA E + +++ D R Q T E R
Sbjct: 960 QVANSPSSAAQKAVTESS--EQDMKSGTEDLRTERLQKTTERFR 1001
>gi|145580615 KRI1 homolog [Homo sapiens]
Length = 709
Score = 38.9 bits (89), Expect = 0.007
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Query: 10 RKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQG------DQSDTEDEVDSDFDI 63
RK GN + GL E + ED+F + ++ DEY G Q + E+ ++ D++
Sbjct: 375 RKVTGNEMLGLEEGDLEDDFDPAQHDQLMQKCFGDEYYGAVEEEKPQFEEEEGLEDDWNW 434
Query: 64 DEGDEPSSDGE 74
D D P +G+
Sbjct: 435 DTWDGPEQEGD 445
>gi|161702986 ezrin [Homo sapiens]
Length = 586
Score = 38.5 bits (88), Expect = 0.010
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 58 DSDFDIDEGDEPSSDGEAEEPRRK--RRVVTKAYKEPLKSLRPRKVNTPAGSSQKA--RE 113
D F I D+ + D PR + +R++ +R RK +T KA RE
Sbjct: 252 DKKFVIKPIDKKAPDFVFYAPRLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQARE 311
Query: 114 EKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQER---QGQSRRRKGPHCERPLTQE 170
EK LE Q ++ + R+ T E ++ +R +E + Q K ER L+++
Sbjct: 312 EKHQKQLERQQLETEKK---RRETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQ 368
Query: 171 ELLREAKITEELNLRSLETYERLEADKKKQVHKKRK 206
++ A EE R+ E ERLEAD+ + K +
Sbjct: 369 --IQRALQLEEERKRAQEEAERLEADRMAALRAKEE 402
>gi|21614499 ezrin [Homo sapiens]
Length = 586
Score = 38.5 bits (88), Expect = 0.010
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 58 DSDFDIDEGDEPSSDGEAEEPRRK--RRVVTKAYKEPLKSLRPRKVNTPAGSSQKA--RE 113
D F I D+ + D PR + +R++ +R RK +T KA RE
Sbjct: 252 DKKFVIKPIDKKAPDFVFYAPRLRINKRILQLCMGNHELYMRRRKPDTIEVQQMKAQARE 311
Query: 114 EKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQER---QGQSRRRKGPHCERPLTQE 170
EK LE Q ++ + R+ T E ++ +R +E + Q K ER L+++
Sbjct: 312 EKHQKQLERQQLETEKK---RRETVEREKEQMMREKEELMLRLQDYEEKTKKAERELSEQ 368
Query: 171 ELLREAKITEELNLRSLETYERLEADKKKQVHKKRK 206
++ A EE R+ E ERLEAD+ + K +
Sbjct: 369 --IQRALQLEEERKRAQEEAERLEADRMAALRAKEE 402
>gi|239735588 TRAF2 and NCK interacting kinase isoform 6 [Homo
sapiens]
Length = 1297
Score = 38.5 bits (88), Expect = 0.010
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSS----DGEAEEPRRKRRVVTKAYKEPLKS 95
E + EY+ S+ E+E + + EPSS GE+ R R+ A KE ++
Sbjct: 315 EKDETEYEYSGSEEEEEEN------DSGEPSSILNLPGESTLRRDFLRLQL-ANKERSEA 367
Query: 96 LRPRKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQS 155
LR +++ ++ E K L E Q + ++ R+ + R+ LR Q+ + Q
Sbjct: 368 LRRQQLEQ---QQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKELRKQQEREQR 424
Query: 156 RRRKGPHCERPLTQEELLREAKITEELNLRSLETYER-LEADKKKQVHKK 204
R H E + +EE R A+ +E R LE +R LE +++ +H++
Sbjct: 425 R-----HYEEQMRREEERRRAEHEQEYIRRQLEEEQRQLEILQQQLLHEQ 469
>gi|239735586 TRAF2 and NCK interacting kinase isoform 5 [Homo
sapiens]
Length = 1305
Score = 38.5 bits (88), Expect = 0.010
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSS----DGEAEEPRRKRRVVTKAYKEPLKS 95
E + EY+ S+ E+E + + EPSS GE+ R R+ A KE ++
Sbjct: 315 EKDETEYEYSGSEEEEEEN------DSGEPSSILNLPGESTLRRDFLRLQL-ANKERSEA 367
Query: 96 LRPRKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQS 155
LR +++ ++ E K L E Q + ++ R+ + R+ LR Q+ + Q
Sbjct: 368 LRRQQLEQ---QQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKELRKQQEREQR 424
Query: 156 RRRKGPHCERPLTQEELLREAKITEELNLRSLETYER-LEADKKKQVHKK 204
R H E + +EE R A+ +E R LE +R LE +++ +H++
Sbjct: 425 R-----HYEEQMRREEERRRAEHEQEYIRRQLEEEQRQLEILQQQLLHEQ 469
>gi|239735580 TRAF2 and NCK interacting kinase isoform 2 [Homo
sapiens]
Length = 1352
Score = 38.5 bits (88), Expect = 0.010
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSS----DGEAEEPRRKRRVVTKAYKEPLKS 95
E + EY+ S+ E+E + + EPSS GE+ R R+ A KE ++
Sbjct: 315 EKDETEYEYSGSEEEEEEN------DSGEPSSILNLPGESTLRRDFLRLQL-ANKERSEA 367
Query: 96 LRPRKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQS 155
LR +++ ++ E K L E Q + ++ R+ + R+ LR Q+ + Q
Sbjct: 368 LRRQQLEQ---QQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKELRKQQEREQR 424
Query: 156 RRRKGPHCERPLTQEELLREAKITEELNLRSLETYER-LEADKKKQVHKK 204
R H E + +EE R A+ +E R LE +R LE +++ +H++
Sbjct: 425 R-----HYEEQMRREEERRRAEHEQEYIRRQLEEEQRQLEILQQQLLHEQ 469
>gi|55741807 TRAF2 and NCK interacting kinase isoform 1 [Homo
sapiens]
Length = 1360
Score = 38.5 bits (88), Expect = 0.010
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSS----DGEAEEPRRKRRVVTKAYKEPLKS 95
E + EY+ S+ E+E + + EPSS GE+ R R+ A KE ++
Sbjct: 315 EKDETEYEYSGSEEEEEEN------DSGEPSSILNLPGESTLRRDFLRLQL-ANKERSEA 367
Query: 96 LRPRKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQS 155
LR +++ ++ E K L E Q + ++ R+ + R+ LR Q+ + Q
Sbjct: 368 LRRQQLEQ---QQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKELRKQQEREQR 424
Query: 156 RRRKGPHCERPLTQEELLREAKITEELNLRSLETYER-LEADKKKQVHKK 204
R H E + +EE R A+ +E R LE +R LE +++ +H++
Sbjct: 425 R-----HYEEQMRREEERRRAEHEQEYIRRQLEEEQRQLEILQQQLLHEQ 469
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 38.5 bits (88), Expect = 0.010
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 14 GNRLSGLLEAEEEDEFYQTTYG-GFTEESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSD 72
G G E EEE E + G G EE G+ E + + + E E + + +EG+E +
Sbjct: 990 GEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKE 1049
Query: 73 GEAEEPRRKR 82
GE EE RR R
Sbjct: 1050 GEGEENRRNR 1059
Score = 33.5 bits (75), Expect = 0.31
Identities = 18/60 (30%), Positives = 30/60 (50%)
Query: 22 EAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDGEAEEPRRK 81
E E E + GG E +E +G++ + E+E + + + EG+E +GE EE K
Sbjct: 798 EEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGK 857
Score = 33.1 bits (74), Expect = 0.40
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 21/166 (12%)
Query: 22 EAEEEDEFYQTTYGGFTEESGDDEY------QGDQSDTEDEVDSDFDIDEGDEPSSDGEA 75
E +E ++ +Q EE G++E+ +GD+ + E++ + EG+E + E
Sbjct: 711 EQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREK 770
Query: 76 EEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQ 135
EE RK+ +A KE K + EE E ++ G + +
Sbjct: 771 EEGERKKE--ERAGKE-------EKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEE 821
Query: 136 STAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITEE 181
E +E +G+ +G E EE E K EE
Sbjct: 822 GKGEREE------EEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEE 861
Score = 33.1 bits (74), Expect = 0.40
Identities = 23/80 (28%), Positives = 34/80 (42%), Gaps = 8/80 (10%)
Query: 6 GRAPRKTAGNRLSG--------LLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEV 57
GR K G + G E EEE+ + G EE G+ E + + E+E
Sbjct: 803 GRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEG 862
Query: 58 DSDFDIDEGDEPSSDGEAEE 77
+ +EG+E +GE EE
Sbjct: 863 EEGEGEEEGEEGEGEGEEEE 882
Score = 31.6 bits (70), Expect = 1.2
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 22 EAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDGEAEE 77
E EEE+ + G EE G+ + + + + E E + + EG+E +GE EE
Sbjct: 834 EGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEE 889
Score = 30.0 bits (66), Expect = 3.4
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 22 EAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDGEAEE 77
E E E E + G EE G+ E + ++ + + E + + EG+E +GE E+
Sbjct: 888 EEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGED 943
Score = 29.6 bits (65), Expect = 4.4
Identities = 40/212 (18%), Positives = 80/212 (37%), Gaps = 10/212 (4%)
Query: 6 GRAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDE 65
G + G G E EE + + G EE G+ E + ++ + E E + + + +E
Sbjct: 917 GEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEE 976
Query: 66 G------DEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLP 119
G +E +GE EE + + +E + G + E
Sbjct: 977 GEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEE 1036
Query: 120 LELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKIT 179
E +++G + K + E R+ +E +G+ + ER EE + +KI
Sbjct: 1037 EEGEEEGEEREK---EGEGEENRRNREEEEEEEGKYQETGEEENERQ-DGEEYKKVSKIK 1092
Query: 180 EELNLRSLETYERLEADKKKQVHKKRKCPGPI 211
+ +TY++ + K+++ P+
Sbjct: 1093 GSVKYGKHKTYQKKSVTNTQGNGKEQRSKMPV 1124
Score = 28.9 bits (63), Expect = 7.6
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 5/64 (7%)
Query: 14 GNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDG 73
G G E EEE E G E G++E +G+ + E E + +EG+E +G
Sbjct: 878 GEEEEGEGEGEEEGEGEGEEEEG--EGEGEEEGEGEGEEEEGEGKGE---EEGEEGEGEG 932
Query: 74 EAEE 77
E EE
Sbjct: 933 EEEE 936
Score = 28.5 bits (62), Expect = 9.9
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 24 EEEDEFYQTTYGGFTEESGDDEY-QGDQSDTEDEVDSDFDIDEGDEPSSDGEAEE 77
EEE E G E G++E +G+ D E E + + EG+E +GE EE
Sbjct: 914 EEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEE 968
Score = 28.5 bits (62), Expect = 9.9
Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 6/135 (4%)
Query: 6 GRAPRKTAGNRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDE 65
G + G G E EE +E G E+ G+ E + E+E + + +
Sbjct: 1019 GEVEGEVEGEEGEGEGEEEEGEE-----EGEEREKEGEGEENRRNREEEEEEEGKYQ-ET 1072
Query: 66 GDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPLELQDD 125
G+E + + EE ++ ++ K+ + + V G+ ++ R + + L +
Sbjct: 1073 GEEENERQDGEEYKKVSKIKGSVKYGKHKTYQKKSVTNTQGNGKEQRSKMPVQSKRLLKN 1132
Query: 126 GSDSRKSMRQSTAEH 140
G K + H
Sbjct: 1133 GPSGSKKFWNNVLPH 1147
>gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens]
Length = 471
Score = 38.5 bits (88), Expect = 0.010
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDGEAEEPRRKR 82
E G DEY+ + + E+E + D D D D SD + EE RR+R
Sbjct: 414 EMGPDEYEEMEEEEEEEEEEDEDDDSADMDESDEDDEEERRRR 456
>gi|51093859 calcium channel, voltage-dependent, T type, alpha 1I
subunit isoform b [Homo sapiens]
Length = 2188
Score = 38.5 bits (88), Expect = 0.010
Identities = 61/250 (24%), Positives = 84/250 (33%), Gaps = 35/250 (14%)
Query: 106 GSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRK-GPHCE 164
GS R + L Q GSD+ S++ + QT L S RR GP
Sbjct: 1957 GSWASLRSPRVNCTLLRQATGSDTSLDASPSSSAGSLQTTLEDSLTLSDSPRRALGPPAP 2016
Query: 165 RPLTQEELLREAKITEELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGE 224
P + L A+ L R L + L A ++ H P T+H
Sbjct: 2017 APGPRAGLSPAARRRLSLRGRGLFSLRGLRAHQRS--HSSGGSTSPGCTHH--------- 2065
Query: 225 PGPKEENVDIEGLDPAPSVSALTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPP 284
+ +DP+ G G + S T + S + F P P
Sbjct: 2066 ----------DSMDPSDEEG----RGGAGGGGAGSEHSETLSSLSLTSLFCPPPPPPAPG 2111
Query: 285 KVPVREVCPVTHRPALYRDPVTDIPYATARAFKIIRE---AYKKYITAHGLPPTASALGP 341
P R+ + A R P+A A A + R A + G P LGP
Sbjct: 2112 LTPARKFSSTSSLAAPGR------PHAAALAHGLARSPSWAADRSKDPPGRAPLPMGLGP 2165
Query: 342 GPPPPEPLPG 351
PPP+PLPG
Sbjct: 2166 LAPPPQPLPG 2175
>gi|21361077 calcium channel, voltage-dependent, T type, alpha 1I
subunit isoform a [Homo sapiens]
Length = 2223
Score = 38.5 bits (88), Expect = 0.010
Identities = 61/250 (24%), Positives = 84/250 (33%), Gaps = 35/250 (14%)
Query: 106 GSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRK-GPHCE 164
GS R + L Q GSD+ S++ + QT L S RR GP
Sbjct: 1992 GSWASLRSPRVNCTLLRQATGSDTSLDASPSSSAGSLQTTLEDSLTLSDSPRRALGPPAP 2051
Query: 165 RPLTQEELLREAKITEELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVTVPLVGE 224
P + L A+ L R L + L A ++ H P T+H
Sbjct: 2052 APGPRAGLSPAARRRLSLRGRGLFSLRGLRAHQRS--HSSGGSTSPGCTHH--------- 2100
Query: 225 PGPKEENVDIEGLDPAPSVSALTPHAGTGPVNPPARCSRTFITFSDDATFEEWFPQGRPP 284
+ +DP+ G G + S T + S + F P P
Sbjct: 2101 ----------DSMDPSDEEG----RGGAGGGGAGSEHSETLSSLSLTSLFCPPPPPPAPG 2146
Query: 285 KVPVREVCPVTHRPALYRDPVTDIPYATARAFKIIRE---AYKKYITAHGLPPTASALGP 341
P R+ + A R P+A A A + R A + G P LGP
Sbjct: 2147 LTPARKFSSTSSLAAPGR------PHAAALAHGLARSPSWAADRSKDPPGRAPLPMGLGP 2200
Query: 342 GPPPPEPLPG 351
PPP+PLPG
Sbjct: 2201 LAPPPQPLPG 2210
>gi|102467235 inner centromere protein antigens 135/155kDa isoform 1
[Homo sapiens]
Length = 918
Score = 38.5 bits (88), Expect = 0.010
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 50 QSDTEDEVDSDF-DIDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSS 108
+ + + +++ F IDE E + + E + K++ K +E + +
Sbjct: 592 KEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWL 651
Query: 109 QKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLT 168
Q+ EE+ L LQ + ++ +R++ AE R R QER+ Q RR + +
Sbjct: 652 QQEEEERRHQEL-LQKKKEEEQERLRKA-AEAKRLAEQREQERREQERREQERREQERRE 709
Query: 169 QEELLREAKITEELNLRSLETYERLEADKKKQVHKK 204
QE +E ++ E+ R ERL+A+++ Q +K
Sbjct: 710 QERREQERQLAEQERRRE---QERLQAERELQEREK 742
Score = 32.7 bits (73), Expect = 0.52
Identities = 47/189 (24%), Positives = 77/189 (40%), Gaps = 32/189 (16%)
Query: 38 TEESGDDEYQGDQSDTEDEVDSDF-----------DIDEGDEPSSDGEAEEPRRKRR--- 83
T +G E + DQ+D E ++DE ++ D E + PR K
Sbjct: 424 TPSAGQQEAKTDQADGPREPPQSARRKRSYKQAVSELDE-EQHLEDEELQPPRSKTPSSP 482
Query: 84 VVTKAYKEPLKSL-----RPRKVNTPAGSSQKAREE--KALLPLELQDDGSDSRKSMRQS 136
PL++ R + + TP + + + K PL + S K
Sbjct: 483 CPASKVVRPLRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDPKCSFVEK----- 537
Query: 137 TAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQE-ELLREAKITEELNLRSLETYERLEA 195
E R LR +E Q RR+K +R +E +L RE ++ + L R E E+++
Sbjct: 538 --ERQRLENLRRKEEAEQLRRQKVEEDKRRRLEEVKLKREERLRKVLQAR--ERVEQMKE 593
Query: 196 DKKKQVHKK 204
+KKKQ+ +K
Sbjct: 594 EKKKQIEQK 602
>gi|102467242 inner centromere protein antigens 135/155kDa isoform 2
[Homo sapiens]
Length = 914
Score = 38.5 bits (88), Expect = 0.010
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 6/156 (3%)
Query: 50 QSDTEDEVDSDF-DIDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSS 108
+ + + +++ F IDE E + + E + K++ K +E + +
Sbjct: 588 KEEKKKQIEQKFAQIDEKTEKAKEERLAEEKAKKKAAAKKMEEVEARRKQEEEARRLRWL 647
Query: 109 QKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLT 168
Q+ EE+ L LQ + ++ +R++ AE R R QER+ Q RR + +
Sbjct: 648 QQEEEERRHQEL-LQKKKEEEQERLRKA-AEAKRLAEQREQERREQERREQERREQERRE 705
Query: 169 QEELLREAKITEELNLRSLETYERLEADKKKQVHKK 204
QE +E ++ E+ R ERL+A+++ Q +K
Sbjct: 706 QERREQERQLAEQERRRE---QERLQAERELQEREK 738
Score = 34.7 bits (78), Expect = 0.14
Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 36/172 (20%)
Query: 65 EGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSL--------------RPRKVNTPAGSSQK 110
E +DG E P+ RR ++YK+ + L R + ++P +S+
Sbjct: 431 EAKTDQADGPREPPQSARR--KRSYKQAVSELDEEQHLEDEELQPPRSKTPSSPCPASKV 488
Query: 111 AREEKALL---------------PLELQDDGSDSRKSMRQSTAEHTRQTF--LRVQERQG 153
R + L P + +R E RQ LR +E
Sbjct: 489 VRPLRTFLHTVQRNQMLMTPTSAPRSVMKSFIKRNTPLRMDPKEKERQRLENLRRKEEAE 548
Query: 154 QSRRRKGPHCERPLTQE-ELLREAKITEELNLRSLETYERLEADKKKQVHKK 204
Q RR+K +R +E +L RE ++ + L R E E+++ +KKKQ+ +K
Sbjct: 549 QLRRQKVEEDKRRRLEEVKLKREERLRKVLQAR--ERVEQMKEEKKKQIEQK 598
>gi|29244924 chromodomain helicase DNA binding protein 6 [Homo
sapiens]
Length = 2715
Score = 38.1 bits (87), Expect = 0.012
Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 8/135 (5%)
Query: 77 EPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQS 136
EP+ KR+ K KEP K+ P+K QK +KA P E G+ K R
Sbjct: 115 EPKPKRKREPKEPKEPRKAKEPKKAKEHKEPKQKDGAKKARKPREA--SGTKEAKEKRSC 172
Query: 137 TAEHTRQTFLRVQERQGQS---RRRKGPHCERPLTQEELLREAKITEELNLRSLETYERL 193
T R + + QG + +++KG + T E L + +T E+ E
Sbjct: 173 TDSAARTKSRKASKEQGPTPVEKKKKGKR-KSETTVESLELDQGLTNPSLRSPEESTEST 231
Query: 194 EADKKKQVH--KKRK 206
++ K++ K+RK
Sbjct: 232 DSQKRRSGRQVKRRK 246
Score = 32.3 bits (72), Expect = 0.68
Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 9/121 (7%)
Query: 68 EPSSDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAGSSQKAREEKALLPLELQDDGS 127
EP A + + R K +EP + PRK P +KA+E K Q DG+
Sbjct: 100 EPGDQEGAAKGSKDREPKPKRKREPKEPKEPRKAKEP----KKAKEHKE----PKQKDGA 151
Query: 128 DSRKSMRQSTAEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITEELNLRSL 187
+ R+++ + + +++ RK + P T E ++ K E + SL
Sbjct: 152 KKARKPREASGTKEAKEKRSCTDSAARTKSRKASKEQGP-TPVEKKKKGKRKSETTVESL 210
Query: 188 E 188
E
Sbjct: 211 E 211
>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
[Homo sapiens]
Length = 731
Score = 37.7 bits (86), Expect = 0.016
Identities = 41/189 (21%), Positives = 74/189 (39%), Gaps = 28/189 (14%)
Query: 41 SGDDEYQGDQSDTEDEVDSDFD---------IDEGDEPSSDGEAEEPRRKRRVVTKAYKE 91
SGDD + SD E+E++S D D+ +E SS+ E E + V KA E
Sbjct: 543 SGDDLVPVEVSDLEEELESFSDEEEEEQEQQRDDAEESSSEPEEENVGNDTKAVIKALDE 602
Query: 92 PL----------KSLRPRKVNTPAGSSQ----KAREEKALLPLELQDDGSDSRKSMRQST 137
+ K+ + V G S+ K E++ L ++ D + R++
Sbjct: 603 KIAKYQKFLDKAKAKKFSAVRISKGLSEKIFAKPEEQRKTLEEDVDDRAPSKKGKKRKAQ 662
Query: 138 AEHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITEELNLRSLETYERLEADK 197
E ++ + RR+ +RP + E N+++ ++ D
Sbjct: 663 REEEQEHSNKAPRALTSKERRRAVRQQRPKKV-----GVRYYETHNVKNRNRNKKKTNDS 717
Query: 198 KKQVHKKRK 206
+ Q HK++K
Sbjct: 718 EGQKHKRKK 726
>gi|9994179 transcriptional regulator protein [Homo sapiens]
Length = 308
Score = 37.7 bits (86), Expect = 0.016
Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Query: 12 TAGNRLSGLL-EAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGDEPS 70
+A GL+ +A ED+F + GG +E G +E + + S ++ DS+ + E D+P
Sbjct: 33 SAAEEKGGLVSDAYGEDDF--SRLGG--DEDGYEEEEDENSRQSEDDDSETEKPEADDPK 88
Query: 71 SDGEAEEPRRKRRVVTKAYKEPLKSLRPRKVNTP 104
+ EAE +R + + ++ E ++++ P ++ P
Sbjct: 89 DNTEAE--KRDPQELVASFSERVRNMSPDEIKIP 120
>gi|93587342 voltage-gated sodium channel type 4 alpha [Homo
sapiens]
Length = 1836
Score = 37.7 bits (86), Expect = 0.016
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Query: 160 GPHCERPLTQEELLREAKITEELNLRSLETYERLEADKKKQVHKKRKCPGPIITYHSVTV 219
GP C RP T+E L + R++E RL+ +K+ ++ + + P +
Sbjct: 13 GPECLRPFTRESL-------AAIEQRAVEEEARLQRNKQMEIEEPERKPRSDLEAGKNLP 65
Query: 220 PLVGEPGPKEENVDIEGLDP 239
+ G+P P+ + +E LDP
Sbjct: 66 MIYGDPPPEVIGIPLEDLDP 85
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 37.7 bits (86), Expect = 0.016
Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 11/124 (8%)
Query: 15 NRLSGLLEAEEEDEFYQTTYGGFTEESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDGE 74
++ G+L EEEDE EE ++E + + + E+E + + + +E +E + E
Sbjct: 249 SKQKGILSHEEEDE----------EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEE 298
Query: 75 AEEPRRKRRVVTKAYKEPLKSLRPRKVNTPAG-SSQKAREEKALLPLELQDDGSDSRKSM 133
EE + ++E +K G S + E +++ DD D
Sbjct: 299 EEEEEEEEAAPDVIFQEDTSHTSAQKAPELRGPESPSPKPEYSVIVEVRSDDDKDEDTHS 358
Query: 134 RQST 137
R+ST
Sbjct: 359 RKST 362
>gi|21237805 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin c2 isoform a [Homo sapiens]
Length = 1214
Score = 37.7 bits (86), Expect = 0.016
Identities = 72/330 (21%), Positives = 120/330 (36%), Gaps = 35/330 (10%)
Query: 38 TEESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSSDGEAEEPRRKRRVVTKAYKEPLKSLR 97
+E DE +G + D+E E + +GD + +EP+ + V K E +
Sbjct: 791 SEAPKKDEEKGKEGDSEKESEKS----DGDPIVDPEKEKEPKEGQEEVLKEVVESEGERK 846
Query: 98 PR--------KVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQ 149
+ ++T A ++ A KA +++ S ++ T + LR
Sbjct: 847 TKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHF 906
Query: 150 ERQGQSRRRKGPHCERPLTQEELLREAKITEELNLRSLETYERLEADKKKQVHKKRKCPG 209
E R+ E Q R+A E+L + R +Q+H++++ P
Sbjct: 907 EELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEM----RARQQHFQQMHQQQQQPP 962
Query: 210 PIITYHSVTVPLVGEPGPKEENVDIEGLDPAPSVSALTPHAGTGPVNPPARCSRTFITFS 269
P + S +P G GP + GL AP+ S + AG+G S
Sbjct: 963 PALPPGSQPIPPTGAAGPPA----VHGLAVAPA-SVVPAPAGSGAPPGSLGPSEQIGQAG 1017
Query: 270 DDATFEEWFPQG--RPPKVPVREVCPVTHRPALY---RDPVTDIPYATARAFKIIREAYK 324
A ++ P G +P VP P H P+ + + P + +P A +
Sbjct: 1018 STAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGS--------- 1068
Query: 325 KYITAHGLPPTASALGPGPPPPEPLPGSGP 354
+ G P G PPPP P P P
Sbjct: 1069 GHPGVAGNAPLGLPFGMPPPPPPPAPSIIP 1098
>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
sapiens]
Length = 1268
Score = 37.4 bits (85), Expect = 0.021
Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 22/168 (13%)
Query: 40 ESGDDEYQGDQSDTEDEVDSDFDIDEGDEPSS----DGEAEEPRRKRRVVTKAYKEPLKS 95
E + EY+ S+ E+E + + EPSS GE+ R R+ A KE ++
Sbjct: 315 EKDETEYEYSGSEEEEEEN------DSGEPSSILNLPGESTLRRDFLRLQL-ANKERSEA 367
Query: 96 LRPRKVNTPAGSSQKAREEKALLPLELQDDGSDSRKSMRQSTAEHTRQTFLRVQERQGQS 155
LR +++ ++ E K L E Q + ++ R+ + R+ LR Q+ + Q
Sbjct: 368 LRRQQLEQ---QQRENEEHKRQLLAERQKRIEEQKEQRRRLEEQQRREKELRKQQEREQR 424
Query: 156 RRRKGPHCERPLTQEELLREAKITEELNLRSLETY---ERLEADKKKQ 200
R H E + +EE R A+ +E + LE ERL+ K++
Sbjct: 425 R-----HYEEQMRREEERRRAEHEQEYKRKQLEEQRQAERLQRQLKQE 467
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.132 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,214,375
Number of Sequences: 37866
Number of extensions: 1057371
Number of successful extensions: 9919
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 441
Number of HSP's that attempted gapping in prelim test: 7617
Number of HSP's gapped (non-prelim): 2222
length of query: 364
length of database: 18,247,518
effective HSP length: 104
effective length of query: 260
effective length of database: 14,309,454
effective search space: 3720458040
effective search space used: 3720458040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.