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Search of human proteins with 5174667
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5174667 sarcoma amplified sequence [Homo sapiens]
(210 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5174667 sarcoma amplified sequence [Homo sapiens] 428 e-120
gi|7657373 tetraspan NET-6 [Homo sapiens] 251 2e-67
gi|4502679 CD63 antigen isoform A [Homo sapiens] 58 7e-09
gi|91199546 CD63 antigen isoform B [Homo sapiens] 55 6e-08
gi|4759238 transmembrane 4 superfamily member 3 [Homo sapiens] 49 3e-06
gi|21264583 transmembrane 4 superfamily member 9 [Homo sapiens] 49 3e-06
gi|50511934 transmembrane 4 superfamily member 17 isoform b [Hom... 49 4e-06
gi|54859560 transmembrane 4 superfamily member 17 isoform a [Hom... 49 4e-06
gi|54859505 transmembrane 4 superfamily member 17 isoform c [Hom... 49 4e-06
gi|68800005 tetraspanin 4 isoform a [Homo sapiens] 48 5e-06
gi|4507543 tetraspanin 4 isoform a [Homo sapiens] 48 5e-06
gi|68800018 tetraspanin 4 isoform a [Homo sapiens] 48 5e-06
gi|68800024 tetraspanin 4 isoform a [Homo sapiens] 48 5e-06
gi|68800011 tetraspanin 4 isoform a [Homo sapiens] 48 5e-06
gi|68799997 tetraspanin 4 isoform a [Homo sapiens] 48 5e-06
gi|21265104 tetraspanin 7 [Homo sapiens] 45 6e-05
gi|4502693 CD9 antigen [Homo sapiens] 45 6e-05
gi|4507541 transmembrane 4 superfamily member 6 [Homo sapiens] 45 6e-05
gi|5729941 tetraspanin 9 [Homo sapiens] 44 8e-05
gi|190194420 tetraspanin 14 isoform 1 [Homo sapiens] 44 1e-04
gi|87159824 CD151 antigen [Homo sapiens] 43 2e-04
gi|87159822 CD151 antigen [Homo sapiens] 43 2e-04
gi|21237751 CD151 antigen [Homo sapiens] 43 2e-04
gi|21237748 CD151 antigen [Homo sapiens] 43 2e-04
gi|6912528 transmembrane 4 superfamily member 12 [Homo sapiens] 41 8e-04
gi|30425534 tetraspanin 33 [Homo sapiens] 38 0.005
gi|5032201 transmembrane 4 superfamily member 8 isoform 1 [Homo ... 37 0.012
gi|68800032 tetraspanin 4 isoform b [Homo sapiens] 37 0.016
gi|72534746 tetraspanin 18 isoform 1 [Homo sapiens] 36 0.027
gi|42476204 tetraspanin 18 isoform 2 [Homo sapiens] 35 0.035
>gi|5174667 sarcoma amplified sequence [Homo sapiens]
Length = 210
Score = 428 bits (1101), Expect = e-120
Identities = 210/210 (100%), Positives = 210/210 (100%)
Query: 1 MVCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIA 60
MVCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIA
Sbjct: 1 MVCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIA 60
Query: 61 VAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMSNKTR 120
VAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMSNKTR
Sbjct: 61 VAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMSNKTR 120
Query: 121 DELERSFDCCGLFNLTTLYQQDYDFCTAICKSQSPTCQMCGEKFLKHSDEALKILGGVGL 180
DELERSFDCCGLFNLTTLYQQDYDFCTAICKSQSPTCQMCGEKFLKHSDEALKILGGVGL
Sbjct: 121 DELERSFDCCGLFNLTTLYQQDYDFCTAICKSQSPTCQMCGEKFLKHSDEALKILGGVGL 180
Query: 181 FFSFTEILGVWLAMRFRNQKDPRANPSAFL 210
FFSFTEILGVWLAMRFRNQKDPRANPSAFL
Sbjct: 181 FFSFTEILGVWLAMRFRNQKDPRANPSAFL 210
>gi|7657373 tetraspan NET-6 [Homo sapiens]
Length = 204
Score = 251 bits (642), Expect = 2e-67
Identities = 121/210 (57%), Positives = 155/210 (73%), Gaps = 6/210 (2%)
Query: 1 MVCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGVIAVGVFLLLIA 60
MVCGGFACSKN LCALN++Y LVSLLLIG+AAWG G GL+SS+ ++G VIAVG+FL LIA
Sbjct: 1 MVCGGFACSKNCLCALNLLYTLVSLLLIGIAAWGIGFGLISSLRVVGVVIAVGIFLFLIA 60
Query: 61 VAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMSNKTR 120
+ GL+GAV HHQVLLFFYMIIL LVFI QF +SC+CLA+N+ +Q ++ W + R
Sbjct: 61 LVGLIGAVKHHQVLLFFYMIILLLVFIVQFSVSCACLALNQEQQGQLLEVG-WNNTASAR 119
Query: 121 DELERSFDCCGLFNLTTLYQQDYDFCTAICKSQSPTCQMCGEKFLKHSDEALKILGGVGL 180
++++R+ +CCG ++ D C A C +C C +++ E L+ +GG+GL
Sbjct: 120 NDIQRNLNCCGFRSV-----NPNDTCLASCVKSDHSCSPCAPIIGEYAGEVLRFVGGIGL 174
Query: 181 FFSFTEILGVWLAMRFRNQKDPRANPSAFL 210
FFSFTEILGVWL R+RNQKDPRANPSAFL
Sbjct: 175 FFSFTEILGVWLTYRYRNQKDPRANPSAFL 204
>gi|4502679 CD63 antigen isoform A [Homo sapiens]
Length = 238
Score = 57.8 bits (138), Expect = 7e-09
Identities = 58/228 (25%), Positives = 94/228 (41%), Gaps = 46/228 (20%)
Query: 4 GGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGG----------VIAVG 53
GG C K L L + + + +G+ A G G LV S II G +IAVG
Sbjct: 5 GGMKCVKFLLYVLLLAFCACA---VGLIAVGVGAQLVLSQTIIQGATPGSLLPVVIIAVG 61
Query: 54 VFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWW 113
VFL L+A G GA + L+ + I L L+ + + + + ++ N
Sbjct: 62 VFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEFNNNFRQ 121
Query: 114 VMSNKTR--------DELERSFDCCGLFNLTTLYQQDYDFCTAICKSQSP-TCQM----- 159
M N + D ++ F CCG N T D++ ++ K++ P +C +
Sbjct: 122 QMENYPKNNHTASILDRMQADFKCCGAANYT-----DWEKIPSMSKNRVPDSCCINVTVG 176
Query: 160 CGEKFLK---HSDEALKILGG-----------VGLFFSFTEILGVWLA 193
CG F + H + ++ +GG L +F E+LG+ A
Sbjct: 177 CGINFNEKAIHKEGCVEKIGGWLRKNVLVVAAAALGIAFVEVLGIVFA 224
>gi|91199546 CD63 antigen isoform B [Homo sapiens]
Length = 236
Score = 54.7 bits (130), Expect = 6e-08
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 35/201 (17%)
Query: 4 GGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGG----------VIAVG 53
GG C K L L + + + +G+ A G G LV S II G +IAVG
Sbjct: 5 GGMKCVKFLLYVLLLAFCACA---VGLIAVGVGAQLVLSQTIIQGATPGSLLPVVIIAVG 61
Query: 54 VFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWW 113
VFL L+A G GA + L+ + I L L+ + + + + ++ N
Sbjct: 62 VFLFLVAFVGCCGACKENYCLMITFAIFLSLIMLVEVAAAIAGYVFRDKVMSEFNNNFRQ 121
Query: 114 VMSNKTR--------DELERSFDCCGLFNLTTLYQQDYDFCTAICKSQSP-TCQM----- 159
M N + D ++ F CCG N T D++ ++ K++ P +C +
Sbjct: 122 QMENYPKNNHTASILDRMQADFKCCGAANYT-----DWEKIPSMSKNRVPDSCCINVTVG 176
Query: 160 CGEKFLK---HSDEALKILGG 177
CG F + H + ++ +GG
Sbjct: 177 CGINFNEKAIHKEGCVEKIGG 197
>gi|4759238 transmembrane 4 superfamily member 3 [Homo sapiens]
Length = 237
Score = 48.9 bits (115), Expect = 3e-06
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 39/230 (16%)
Query: 2 VCGGFACSKNALCALNVVYMLVSLLLIGVAAW------------GKGLGLVSSIHIIGGV 49
+ G AC K ++ N ++ L +L++ +A W + +G SS + +
Sbjct: 1 MAGVSACIKYSMFTFNFLFWLCGILILALAIWVRVSNDSQAIFGSEDVGS-SSYVAVDIL 59
Query: 50 IAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVIN 109
IAVG ++++ G GA+ + +L + I L L+ + Q V + A+ +SK ++N
Sbjct: 60 IAVGAIIMILGFLGCCGAIKESRCMLLLFFIGLLLILLLQ-VATGILGAVFKSKSDRIVN 118
Query: 110 ASWW----VMSNKTRDE---------LERSFDCCGLFNLTTLYQQDYDFCTAIC---KSQ 153
+ + ++S E + F CCGL N + ++ +C Q
Sbjct: 119 ETLYENTKLLSATGESEKQFQEAIIVFQEEFKCCGLVNGAADWGNNFQHYPELCACLDKQ 178
Query: 154 SPTCQMCGEKFLKHS---------DEALKILGGVGLFFSFTEILGVWLAM 194
P G++ K + + L I+ G+ + EILG+ +M
Sbjct: 179 RPCQSYNGKQVYKETCISFIKDFLAKNLIIVIGISFGLAVIEILGLVFSM 228
>gi|21264583 transmembrane 4 superfamily member 9 [Homo sapiens]
Length = 268
Score = 48.9 bits (115), Expect = 3e-06
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 30/179 (16%)
Query: 8 CSKNALCALNVVYMLVSLLLIGVAAWG---KG-LGLVSSIHIIGGVIAVGVFLL------ 57
C K + NV++ + + +G+ W KG L +SSI +GG V +FL+
Sbjct: 14 CIKYFIFGFNVIFWFLGITFLGIGLWAWNEKGVLSNISSITDLGGFDPVWLFLVVGGVMF 73
Query: 58 LIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMSN 117
++ AG +GA+ + LL F+ + LG++F + + + + ++ ++N
Sbjct: 74 ILGFAGCIGALRENTFLLKFFSVFLGIIFFLELTAGVLAFVF----KDWIKDQLYFFINN 129
Query: 118 KTR------------DELERSFDCCGLFNLTTLYQQDYDFCTAICKSQSPTCQMCGEKF 164
R D + + CCG F Y CT + + + CG F
Sbjct: 130 NIRAYRDDIDLQNLIDFTQEYWQCCGAFGADDWNLNIYFNCT----DSNASRERCGVPF 184
>gi|50511934 transmembrane 4 superfamily member 17 isoform b [Homo
sapiens]
Length = 329
Score = 48.5 bits (114), Expect = 4e-06
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 26/177 (14%)
Query: 8 CSKNALCALNVVYMLVSLLLIGVAAWGKG----LGLVSSIHIIGGV------IAVGVFLL 57
C K L N+V+ ++ L + + W G L +S++ +GG+ + VG +
Sbjct: 16 CGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMS 75
Query: 58 LIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAIN---RSKQTDVINASWWV 114
++ AG +GA+ + LL F+ + LGL+F + R + IN + V
Sbjct: 76 VLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQLNLFINNN--V 133
Query: 115 MSNKTRDELERSFD-------CCGLFNLTTLYQQDYDFCTAICKSQSPTCQMCGEKF 164
+ + +L+ D CCG Y CT + +P+ + CG F
Sbjct: 134 KAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDL----NPSRERCGVPF 186
>gi|54859560 transmembrane 4 superfamily member 17 isoform a [Homo
sapiens]
Length = 332
Score = 48.5 bits (114), Expect = 4e-06
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 26/177 (14%)
Query: 8 CSKNALCALNVVYMLVSLLLIGVAAWGKG----LGLVSSIHIIGGV------IAVGVFLL 57
C K L N+V+ ++ L + + W G L +S++ +GG+ + VG +
Sbjct: 16 CGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMS 75
Query: 58 LIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAIN---RSKQTDVINASWWV 114
++ AG +GA+ + LL F+ + LGL+F + R + IN + V
Sbjct: 76 VLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQLNLFINNN--V 133
Query: 115 MSNKTRDELERSFD-------CCGLFNLTTLYQQDYDFCTAICKSQSPTCQMCGEKF 164
+ + +L+ D CCG Y CT + +P+ + CG F
Sbjct: 134 KAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDL----NPSRERCGVPF 186
>gi|54859505 transmembrane 4 superfamily member 17 isoform c [Homo
sapiens]
Length = 266
Score = 48.5 bits (114), Expect = 4e-06
Identities = 41/177 (23%), Positives = 73/177 (41%), Gaps = 26/177 (14%)
Query: 8 CSKNALCALNVVYMLVSLLLIGVAAWGKG----LGLVSSIHIIGGV------IAVGVFLL 57
C K L N+V+ ++ L + + W G L +S++ +GG+ + VG +
Sbjct: 16 CGKYFLFGFNIVFWVLGALFLAIGLWAWGEKGVLSNISALTDLGGLDPVWLFVVVGGVMS 75
Query: 58 LIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAIN---RSKQTDVINASWWV 114
++ AG +GA+ + LL F+ + LGL+F + R + IN + V
Sbjct: 76 VLGFAGCIGALRENTFLLKFFSVFLGLIFFLELATGILAFVFKDWIRDQLNLFINNN--V 133
Query: 115 MSNKTRDELERSFD-------CCGLFNLTTLYQQDYDFCTAICKSQSPTCQMCGEKF 164
+ + +L+ D CCG Y CT + +P+ + CG F
Sbjct: 134 KAYRDDIDLQNLIDFAQEYWSCCGARGPNDWNLNIYFNCTDL----NPSRERCGVPF 186
>gi|68800005 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 48.1 bits (113), Expect = 5e-06
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 10 KNALCALNVVYMLVSLLLIGVAAW-----GKGLGLVSSIHIIGG---VIAVGVFLLLIAV 61
K + A N+++ L ++GV W G L SS + +I G F++ I
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIITGAFVMAIGF 69
Query: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLA----INRSKQTD------VINAS 111
G +GA+ ++ LL + ++L LVF+ + I+ A I+R Q D +
Sbjct: 70 VGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQ 129
Query: 112 WWVMSNKTRDELERSFDCCGLFNLTTLYQ-----QDYDFCTAICKSQSPTCQM------- 159
V ++ F CCG+ N T ++ + D C C S +C +
Sbjct: 130 GNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSC---CLEFSESCGLHAPGTWW 186
Query: 160 ---CGEKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
C E E L +G GL + +ILG+ AM
Sbjct: 187 KAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAM 224
>gi|4507543 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 48.1 bits (113), Expect = 5e-06
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 10 KNALCALNVVYMLVSLLLIGVAAW-----GKGLGLVSSIHIIGG---VIAVGVFLLLIAV 61
K + A N+++ L ++GV W G L SS + +I G F++ I
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIITGAFVMAIGF 69
Query: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLA----INRSKQTD------VINAS 111
G +GA+ ++ LL + ++L LVF+ + I+ A I+R Q D +
Sbjct: 70 VGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQ 129
Query: 112 WWVMSNKTRDELERSFDCCGLFNLTTLYQ-----QDYDFCTAICKSQSPTCQM------- 159
V ++ F CCG+ N T ++ + D C C S +C +
Sbjct: 130 GNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSC---CLEFSESCGLHAPGTWW 186
Query: 160 ---CGEKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
C E E L +G GL + +ILG+ AM
Sbjct: 187 KAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAM 224
>gi|68800018 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 48.1 bits (113), Expect = 5e-06
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 10 KNALCALNVVYMLVSLLLIGVAAW-----GKGLGLVSSIHIIGG---VIAVGVFLLLIAV 61
K + A N+++ L ++GV W G L SS + +I G F++ I
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIITGAFVMAIGF 69
Query: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLA----INRSKQTD------VINAS 111
G +GA+ ++ LL + ++L LVF+ + I+ A I+R Q D +
Sbjct: 70 VGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQ 129
Query: 112 WWVMSNKTRDELERSFDCCGLFNLTTLYQ-----QDYDFCTAICKSQSPTCQM------- 159
V ++ F CCG+ N T ++ + D C C S +C +
Sbjct: 130 GNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSC---CLEFSESCGLHAPGTWW 186
Query: 160 ---CGEKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
C E E L +G GL + +ILG+ AM
Sbjct: 187 KAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAM 224
>gi|68800024 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 48.1 bits (113), Expect = 5e-06
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 10 KNALCALNVVYMLVSLLLIGVAAW-----GKGLGLVSSIHIIGG---VIAVGVFLLLIAV 61
K + A N+++ L ++GV W G L SS + +I G F++ I
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIITGAFVMAIGF 69
Query: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLA----INRSKQTD------VINAS 111
G +GA+ ++ LL + ++L LVF+ + I+ A I+R Q D +
Sbjct: 70 VGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQ 129
Query: 112 WWVMSNKTRDELERSFDCCGLFNLTTLYQ-----QDYDFCTAICKSQSPTCQM------- 159
V ++ F CCG+ N T ++ + D C C S +C +
Sbjct: 130 GNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSC---CLEFSESCGLHAPGTWW 186
Query: 160 ---CGEKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
C E E L +G GL + +ILG+ AM
Sbjct: 187 KAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAM 224
>gi|68800011 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 48.1 bits (113), Expect = 5e-06
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 10 KNALCALNVVYMLVSLLLIGVAAW-----GKGLGLVSSIHIIGG---VIAVGVFLLLIAV 61
K + A N+++ L ++GV W G L SS + +I G F++ I
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIITGAFVMAIGF 69
Query: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLA----INRSKQTD------VINAS 111
G +GA+ ++ LL + ++L LVF+ + I+ A I+R Q D +
Sbjct: 70 VGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQ 129
Query: 112 WWVMSNKTRDELERSFDCCGLFNLTTLYQ-----QDYDFCTAICKSQSPTCQM------- 159
V ++ F CCG+ N T ++ + D C C S +C +
Sbjct: 130 GNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSC---CLEFSESCGLHAPGTWW 186
Query: 160 ---CGEKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
C E E L +G GL + +ILG+ AM
Sbjct: 187 KAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAM 224
>gi|68799997 tetraspanin 4 isoform a [Homo sapiens]
Length = 238
Score = 48.1 bits (113), Expect = 5e-06
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 36/218 (16%)
Query: 10 KNALCALNVVYMLVSLLLIGVAAW-----GKGLGLVSSIHIIGG---VIAVGVFLLLIAV 61
K + A N+++ L ++GV W G L SS + +I G F++ I
Sbjct: 10 KYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATLSSSFPSLSAANLLIITGAFVMAIGF 69
Query: 62 AGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLA----INRSKQTD------VINAS 111
G +GA+ ++ LL + ++L LVF+ + I+ A I+R Q D +
Sbjct: 70 VGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLHLYGTQ 129
Query: 112 WWVMSNKTRDELERSFDCCGLFNLTTLYQ-----QDYDFCTAICKSQSPTCQM------- 159
V ++ F CCG+ N T ++ + D C C S +C +
Sbjct: 130 GNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSC---CLEFSESCGLHAPGTWW 186
Query: 160 ---CGEKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
C E E L +G GL + +ILG+ AM
Sbjct: 187 KAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAM 224
>gi|21265104 tetraspanin 7 [Homo sapiens]
Length = 249
Score = 44.7 bits (104), Expect = 6e-05
Identities = 45/222 (20%), Positives = 80/222 (36%), Gaps = 37/222 (16%)
Query: 8 CSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGG--------VIAVGVFLLLI 59
C K L + V+ + ++L+ V WGK L L + I +I +I G +++
Sbjct: 14 CLKTLLIIYSFVFWITGVILLAVGVWGK-LTLGTYISLIAENSTNAPYVLIGTGTTIVVF 72
Query: 60 AVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMS--- 116
+ G +L Y + L LVF+ + V S + + M
Sbjct: 73 GLFGCFATCRGSPWMLKLYAMFLSLVFLAELVAGISGFVFRHEIKDTFLRTYTDAMQTYN 132
Query: 117 -----NKTRDELERSFDCCGLFNLTTLYQQDYDFCTAI---CKSQSPTC----------- 157
++ D ++RS CCG+ N T Y I C C
Sbjct: 133 GNDERSRAVDHVQRSLSCCGVQNYTNWSTSPYFLEHGIPPSCCMNETDCNPQDLHNLTVA 192
Query: 158 ------QMCGEKFLKHSDEALKILGGVGLFFSFTEILGVWLA 193
+ C + + + I+ GV +F++++G+ LA
Sbjct: 193 ATKVNQKGCYDLVTSFMETNMGIIAGVAFGIAFSQLIGMLLA 234
>gi|4502693 CD9 antigen [Homo sapiens]
Length = 228
Score = 44.7 bits (104), Expect = 6e-05
Identities = 50/219 (22%), Positives = 83/219 (37%), Gaps = 32/219 (14%)
Query: 2 VCGGFACSKNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIH----------IIGGV-- 49
V GG C K L N ++ L + ++ + W + SI GV
Sbjct: 3 VKGGTKCIKYLLFGFNFIFWLAGIAVLAIGLWLRFDSQTKSIFEQETNNNNSSFYTGVYI 62
Query: 50 -IAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVI 108
I G ++L+ G GAV Q +L + L ++F I + S + +VI
Sbjct: 63 LIGAGALMMLVGFLGCCGAVQESQCMLGLFFGFLLVIF----AIEIAAAIWGYSHKDEVI 118
Query: 109 NASWWVMSN-----KTRDELER--------SFDCCGLFNLTTLYQQDYDFCTAICKSQSP 155
+ KT+DE +R + +CCGL + Q D C ++
Sbjct: 119 KEVQEFYKDTYNKLKTKDEPQRETLKAIHYALNCCGLAG--GVEQFISDICPKKDVLETF 176
Query: 156 TCQMCGEKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
T + C + + D I+G VG+ + I G+ +M
Sbjct: 177 TVKSCPDAIKEVFDNKFHIIGAVGIGIAVVMIFGMIFSM 215
>gi|4507541 transmembrane 4 superfamily member 6 [Homo sapiens]
Length = 245
Score = 44.7 bits (104), Expect = 6e-05
Identities = 42/216 (19%), Positives = 86/216 (39%), Gaps = 31/216 (14%)
Query: 8 CSKNALCALNVVYMLVSLLLIGVAAWGK-------GLGLVSSIHIIGGVIAVGVFLLLIA 60
C K+ L ++ + ++L+ V WGK L + ++ +IA G ++L+
Sbjct: 16 CFKSVLLIYTFIFWITGVILLAVGIWGKVSLENYFSLLNEKATNVPFVLIATGTVIILLG 75
Query: 61 VAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISC----------SCLAINRSKQTDVINA 110
G +L Y + L LVF+ + V + + N K N+
Sbjct: 76 TFGCFATCRASAWMLKLYAMFLTLVFLVELVAAIVGFVFRHEIKNSFKNNYEKALKQYNS 135
Query: 111 SWWVMSNKTRDELERSFDCCGLFN----LTTLYQQDYDFCTAICKSQSPTCQM------- 159
+ S+ D+++ + CCG+ + T Y + F + CK + T Q
Sbjct: 136 TGDYRSHAV-DKIQNTLHCCGVTDYRDWTDTNYYSEKGFPKSCCKLEDCTPQRDADKVNN 194
Query: 160 --CGEKFLKHSDEALKILGGVGLFFSFTEILGVWLA 193
C K + + + ++ G+ + +++G++LA
Sbjct: 195 EGCFIKVMTIIESEMGVVAGISFGVACFQLIGIFLA 230
>gi|5729941 tetraspanin 9 [Homo sapiens]
Length = 239
Score = 44.3 bits (103), Expect = 8e-05
Identities = 47/232 (20%), Positives = 87/232 (37%), Gaps = 46/232 (19%)
Query: 1 MVCGGFACSKNALCALNVVYMLVSLLLIGVAAW-----GKGLGLVSSIHIIGG---VIAV 52
M G C K + N+++ L L+GV W G S + VIA+
Sbjct: 1 MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAANLVIAI 60
Query: 53 GVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLA----INRSKQTDV- 107
G +++ G +GA+ ++ LL + I+L ++ + + ++ +N + + D+
Sbjct: 61 GTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNENAKKDLK 120
Query: 108 -------------INASWWVMSNKTRDELERSFDCCGLFNLTTLYQ--QDYDFCTAICKS 152
+ +W ++ + R CCG+ + T Y + C
Sbjct: 121 EGLLLYHTENNVGLKNAWNIIQAEMR--------CCGVTDYTDWYPVLGENTVPDRCCME 172
Query: 153 QSPTCQM----------CGEKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
S C C EK D+ +LG VG+ +ILG+ +M
Sbjct: 173 NSQGCGRNATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSM 224
>gi|190194420 tetraspanin 14 isoform 1 [Homo sapiens]
Length = 270
Score = 43.5 bits (101), Expect = 1e-04
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 24/174 (13%)
Query: 10 KNALCALNVVYMLVSLLLIGVAAWG---KG----LGLVSSIHIIGGVIAV---GVFLLLI 59
K L + N+++ L ++ +GV W KG L V+ +H I V+ V GV + +
Sbjct: 16 KYLLFSYNIIFWLAGVVFLGVGLWAWSEKGVLSDLTKVTRMHGIDPVVLVLMVGVVMFTL 75
Query: 60 AVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAI-----NRSKQTDVINASWW- 113
AG VGA+ + LL F+ + L+F + ++ +R ++ N +
Sbjct: 76 GFAGCVGALRENICLLNFFCGTIVLIFFLELAVAVLAFLFQDWVRDRFREFFESNIKSYR 135
Query: 114 --VMSNKTRDELERSFDCCGLFNLTTLYQQDYDFCTAI-CKSQSPTCQMCGEKF 164
+ D L+++ CCG + +D+D C S + + CG F
Sbjct: 136 DDIDLQNLIDSLQKANQCCGAYG-----PEDWDLNVYFNCSGASYSREKCGVPF 184
>gi|87159824 CD151 antigen [Homo sapiens]
Length = 253
Score = 42.7 bits (99), Expect = 2e-04
Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 41/227 (18%)
Query: 5 GFACSKNALCALNVVYMLVSLLLIGVAAWGKGLG------LVSSIHIIGGVIAV--GVFL 56
G C K L N + L L ++ V W L L S ++ I V G +
Sbjct: 12 GTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLATAYILVVAGTVV 71
Query: 57 LLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMS 116
++ V G + LL Y I+L ++F+ + + A + T++ M+
Sbjct: 72 MVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNTELKENLKDTMT 131
Query: 117 NKTR-----------DELERSFDCCGLFNLTTLYQQDY------------DFC----TAI 149
+ D+L++ F CCG N ++ D C A+
Sbjct: 132 KRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVVPDSCCKTVVAL 191
Query: 150 CKSQSPTCQM------CGEKFLKHSDEALKILGGVGLFFSFTEILGV 190
C + + C K E L+++G VG+ + ++ G+
Sbjct: 192 CGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGM 238
>gi|87159822 CD151 antigen [Homo sapiens]
Length = 253
Score = 42.7 bits (99), Expect = 2e-04
Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 41/227 (18%)
Query: 5 GFACSKNALCALNVVYMLVSLLLIGVAAWGKGLG------LVSSIHIIGGVIAV--GVFL 56
G C K L N + L L ++ V W L L S ++ I V G +
Sbjct: 12 GTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLATAYILVVAGTVV 71
Query: 57 LLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMS 116
++ V G + LL Y I+L ++F+ + + A + T++ M+
Sbjct: 72 MVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNTELKENLKDTMT 131
Query: 117 NKTR-----------DELERSFDCCGLFNLTTLYQQDY------------DFC----TAI 149
+ D+L++ F CCG N ++ D C A+
Sbjct: 132 KRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVVPDSCCKTVVAL 191
Query: 150 CKSQSPTCQM------CGEKFLKHSDEALKILGGVGLFFSFTEILGV 190
C + + C K E L+++G VG+ + ++ G+
Sbjct: 192 CGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGM 238
>gi|21237751 CD151 antigen [Homo sapiens]
Length = 253
Score = 42.7 bits (99), Expect = 2e-04
Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 41/227 (18%)
Query: 5 GFACSKNALCALNVVYMLVSLLLIGVAAWGKGLG------LVSSIHIIGGVIAV--GVFL 56
G C K L N + L L ++ V W L L S ++ I V G +
Sbjct: 12 GTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLATAYILVVAGTVV 71
Query: 57 LLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMS 116
++ V G + LL Y I+L ++F+ + + A + T++ M+
Sbjct: 72 MVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNTELKENLKDTMT 131
Query: 117 NKTR-----------DELERSFDCCGLFNLTTLYQQDY------------DFC----TAI 149
+ D+L++ F CCG N ++ D C A+
Sbjct: 132 KRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVVPDSCCKTVVAL 191
Query: 150 CKSQSPTCQM------CGEKFLKHSDEALKILGGVGLFFSFTEILGV 190
C + + C K E L+++G VG+ + ++ G+
Sbjct: 192 CGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGM 238
>gi|21237748 CD151 antigen [Homo sapiens]
Length = 253
Score = 42.7 bits (99), Expect = 2e-04
Identities = 45/227 (19%), Positives = 81/227 (35%), Gaps = 41/227 (18%)
Query: 5 GFACSKNALCALNVVYMLVSLLLIGVAAWGKGLG------LVSSIHIIGGVIAV--GVFL 56
G C K L N + L L ++ V W L L S ++ I V G +
Sbjct: 12 GTVCLKYLLFTYNCCFWLAGLAVMAVGIWTLALKSDYISLLASGTYLATAYILVVAGTVV 71
Query: 57 LLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDVINASWWVMS 116
++ V G + LL Y I+L ++F+ + + A + T++ M+
Sbjct: 72 MVTGVLGCCATFKERRNLLRLYFILLLIIFLLEIIAGILAYAYYQQLNTELKENLKDTMT 131
Query: 117 NKTR-----------DELERSFDCCGLFNLTTLYQQDY------------DFC----TAI 149
+ D+L++ F CCG N ++ D C A+
Sbjct: 132 KRYHQPGHEAVTSAVDQLQQEFHCCGSNNSQDWRDSEWIRSQEAGGRVVPDSCCKTVVAL 191
Query: 150 CKSQSPTCQM------CGEKFLKHSDEALKILGGVGLFFSFTEILGV 190
C + + C K E L+++G VG+ + ++ G+
Sbjct: 192 CGQRDHASNIYKVEGGCITKLETFIQEHLRVIGAVGIGIACVQVFGM 238
>gi|6912528 transmembrane 4 superfamily member 12 [Homo sapiens]
Length = 305
Score = 40.8 bits (94), Expect = 8e-04
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 59/240 (24%)
Query: 8 CSKNALCALNVVYMLVSLLLIGVAAWGKG-----LGLVSSIHIIGGVI------------ 50
C + L ALN+++ L+S+ ++ V+AW + L L + + VI
Sbjct: 9 CLRCLLYALNLLFWLMSISVLAVSAWMRDYLNNVLTLTAETRVEEAVILTYFPVVHPVMI 68
Query: 51 AVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFV-------------ISCSCL 97
AV FL+++ + G G V + +LL +Y L ++F + + S +
Sbjct: 69 AVCCFLIIVGMLGYCGTVKRNLLLLAWYFGSLLVIFCVELACGVWTYEQELMVPVQWSDM 128
Query: 98 AINRSKQTDV-INASWWVMSNKTRDELERSFDCCGLFNLT---TLYQQDY--DFCTAICK 151
+++ T+ + W+ + +R F CCG+ T + + D+ D C C
Sbjct: 129 VTLKARMTNYGLPRYRWL--THAWNFFQREFKCCGVVYFTDWLEMTEMDWPPDSC---CV 183
Query: 152 SQSPTC--------------QMCGEK---FLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
+ P C + CG+K FL+ + + L++L +G+ T+IL + L +
Sbjct: 184 REFPGCSKQAHQEDLSDLYQEGCGKKMYSFLRGTKQ-LQVLRFLGISIGVTQILAMILTI 242
>gi|30425534 tetraspanin 33 [Homo sapiens]
Length = 283
Score = 38.1 bits (87), Expect = 0.005
Identities = 49/245 (20%), Positives = 92/245 (37%), Gaps = 59/245 (24%)
Query: 10 KNALCALNVVYMLVSLLLIGVAAWGKGLGLVSSIHIIGGV------IAVGVFLLLIAVAG 63
K L N+++ ++S++++ V + + + + V I VGV + L+ G
Sbjct: 23 KYLLFFFNMLFWVISMVMVAVGVYARLMKHAEAALACLAVDPAILLIVVGVLMFLLTFCG 82
Query: 64 LVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAIN---RSKQTDVINASWWVMSNKTR 120
+G++ + LL + + L VF+ Q + R K +++IN + R
Sbjct: 83 CIGSLRENICLLQTFSLCLTAVFLLQLAAGILGFVFSDKARGKVSEIINNA----IVHYR 138
Query: 121 DEL---------ERSFDCCGLFNLTTLYQQDYDFCT-------------AIC---KSQSP 155
D+L ++ F CCG + Q Y C+ + C Q+
Sbjct: 139 DDLDLQNLIDFGQKKFSCCGGISYKDWSQNMYFNCSEDNPSRERCSVPYSCCLPTPDQAV 198
Query: 156 TCQMCG---------------------EKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
MCG +K + L +LGGV L + +++G+ L+
Sbjct: 199 INTMCGQGMQAFDYLEASKVIYTNGCIDKLVNWIHSNLFLLGGVALGLAIPQLVGILLSQ 258
Query: 195 RFRNQ 199
NQ
Sbjct: 259 ILVNQ 263
>gi|5032201 transmembrane 4 superfamily member 8 isoform 1 [Homo
sapiens]
Length = 253
Score = 37.0 bits (84), Expect = 0.012
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 13/124 (10%)
Query: 49 VIAVGVFLLLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAINRSKQTDV- 107
+IAVG L +I + G + + L ++IIL LVF+ + V+ + +V
Sbjct: 57 IIAVGALLFIIGLIGCCATIRESRCGLATFVIILLLVFVTEVVVVVLGYVYRAKVENEVD 116
Query: 108 ---------INASWWVMSNKTRDELERSFDCCGLFNLTTLYQQDYDFCTAICKSQSPTCQ 158
N + +++ D ++R CCG+ N + D+ T K+QS
Sbjct: 117 RSIQKVYKTYNGTNPDAASRAIDYVQRQLHCCGIHNYSDWENTDWFKET---KNQSVPLS 173
Query: 159 MCGE 162
C E
Sbjct: 174 CCRE 177
>gi|68800032 tetraspanin 4 isoform b [Homo sapiens]
Length = 174
Score = 36.6 bits (83), Expect = 0.016
Identities = 40/163 (24%), Positives = 65/163 (39%), Gaps = 28/163 (17%)
Query: 57 LLIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLA----INRSKQTD------ 106
+ I G +GA+ ++ LL + ++L LVF+ + I+ A I+R Q D
Sbjct: 1 MAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAILFFAYTDKIDRYAQQDLKKGLH 60
Query: 107 VINASWWVMSNKTRDELERSFDCCGLFNLTTLYQ-----QDYDFCTAICKSQSPTCQM-- 159
+ V ++ F CCG+ N T ++ + D C C S +C +
Sbjct: 61 LYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVYNATRVPDSC---CLEFSESCGLHA 117
Query: 160 --------CGEKFLKHSDEALKILGGVGLFFSFTEILGVWLAM 194
C E E L +G GL + +ILG+ AM
Sbjct: 118 PGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQILGLTFAM 160
>gi|72534746 tetraspanin 18 isoform 1 [Homo sapiens]
Length = 267
Score = 35.8 bits (81), Expect = 0.027
Identities = 32/154 (20%), Positives = 61/154 (39%), Gaps = 38/154 (24%)
Query: 7 ACSKNALCALNVVYMLVSLLLIGVAAWG-------KGLGLVSSIHIIGGVI--AVGVFLL 57
+C K + N L L+ + W + + + + + G I A+G L
Sbjct: 7 SCMKYLMFVFNFFIFLGGACLLAIGIWVMVDPTGFREIVAANPLLLTGAYILLAMGGLLF 66
Query: 58 LIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAI------------------ 99
L+ G GAV ++ LL F+ + + ++F+ + +S + LA
Sbjct: 67 LLGFLGCCGAVRENKCLLLFFFLFILIIFLAE--LSAAILAFIFRENLTREFFTKELTKH 124
Query: 100 -NRSKQTDVINASWWVMSNKTRDELERSFDCCGL 132
+ TDV +A+W + + +F CCG+
Sbjct: 125 YQGNNDTDVFSATW--------NSVMITFGCCGV 150
>gi|42476204 tetraspanin 18 isoform 2 [Homo sapiens]
Length = 248
Score = 35.4 bits (80), Expect = 0.035
Identities = 31/154 (20%), Positives = 61/154 (39%), Gaps = 38/154 (24%)
Query: 7 ACSKNALCALNVVYMLVSLLLIGVAAWG-------KGLGLVSSIHIIGGVI--AVGVFLL 57
+C K + N L L+ + W + + + + + G I A+G L
Sbjct: 7 SCMKYLMFVFNFFIFLGGACLLAIGIWVMVDPTGFREIVAANPLLLTGAYILLAMGGLLF 66
Query: 58 LIAVAGLVGAVNHHQVLLFFYMIILGLVFIFQFVISCSCLAI------------------ 99
L+ G GAV ++ LL F+ + + ++F+ + +S + LA
Sbjct: 67 LLGFLGCCGAVRENKCLLLFFFLFILIIFLAE--LSAAILAFIFRENLTREFFTKELTKH 124
Query: 100 -NRSKQTDVINASWWVMSNKTRDELERSFDCCGL 132
+ TD+ +A+W + + +F CCG+
Sbjct: 125 YQGNNDTDIFSATW--------NSVMITFGCCGV 150
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.331 0.143 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,580,845
Number of Sequences: 37866
Number of extensions: 297887
Number of successful extensions: 1228
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 1165
Number of HSP's gapped (non-prelim): 56
length of query: 210
length of database: 18,247,518
effective HSP length: 98
effective length of query: 112
effective length of database: 14,536,650
effective search space: 1628104800
effective search space used: 1628104800
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.