Guide to the Human Genome
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Name: TRADD Sequence: fasta or formatted (312aa) NCBI GI: 13378137
Description:

TNFRSF1A-associated via death domain

Referenced in:

TNF and Related Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.5         39           3
 C cysteine            1.9          6           1
 D aspartate           4.8         15           1
 E glutamate           8.0         25           2
 F phenylalanine       2.6          8           1
 G glycine             7.4         23           2
 H histidine           1.3          4           1
 I isoleucine          1.0          3           1
 K lysine              2.6          8           1
 L leucine            15.7         49           2
 M methionine          0.6          2           1
 N asparagine          1.6          5           1
 P proline             6.7         21           7
 Q glutamine           7.7         24           2
 R arginine            9.3         29           2
 S serine              6.1         19           2
 T threonine           1.6          5           1
 V valine              5.8         18           2
 W tryptophan          0.6          2           1
 Y tyrosine            2.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TNFRSF1A-associated via death domain 
RIPK1                 0.034   receptor (TNFRSF)-interacting serine-threonine kinas...
DIAPH2                0.029   diaphanous 2 isoform 12C 
DIAPH2                0.029   diaphanous 2 isoform 156 
GRID2IP               0.024   glutamate receptor, ionotropic, delta 2 (Grid2) int...
ENAH                  0.024   enabled homolog isoform a 
ENAH                  0.024   enabled homolog isoform b 
THOC1                 0.024   THO complex 1 
AKAP8L                0.020   A kinase (PRKA) anchor protein 8-like 
DIAPH3                0.020   diaphanous homolog 3 isoform b 
DIAPH3                0.020   diaphanous homolog 3 isoform a 
SF3B2                 0.020   splicing factor 3B subunit 2 
HCN2                  0.020   hyperpolarization activated cyclic nucleotide-gated...
ZIC5                  0.020   zinc finger protein of the cerebellum 5 
RBM33                 0.019   RNA binding motif protein 33 
SNX26                 0.019   sorting nexin 26 
PXK                   0.019   PX domain containing serine/threonine kinase 
SGIP1                 0.019   SH3-domain GRB2-like (endophilin) interacting prote...
SMR3B                 0.017   submaxillary gland androgen regulated protein 3 homol...
RCOR2                 0.017   REST corepressor 2 
PRR12                 0.017   proline rich 12 
RANBP9                0.017   RAN binding protein 9 
ADAMTS19              0.017   ADAM metallopeptidase with thrombospondin type 1 mo...
FMN1                  0.017   formin 1 
FHOD1                 0.017   formin homology 2 domain containing 1 
FHOD3                 0.015   formin homology 2 domain containing 3 
FLJ20021              0.015   PREDICTED: hypothetical protein 
FLJ20021              0.015   PREDICTED: hypothetical protein 
LOC100287104          0.015   PREDICTED: hypothetical protein XP_002343630 
FLJ20021              0.015   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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