Guide to the Human Genome
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Name: PIK3IP1 Sequence: fasta or formatted (263aa) NCBI GI: 51317358
Description:

HGFL protein isoform 1

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [173aa] HGFL protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         26           3
 C cysteine            3.0          8           1
 D aspartate           4.6         12           1
 E glutamate           7.2         19           1
 F phenylalanine       1.9          5           1
 G glycine             9.5         25           2
 H histidine           1.5          4           1
 I isoleucine          4.6         12           3
 K lysine              3.4          9           2
 L leucine             8.0         21           2
 M methionine          2.7          7           2
 N asparagine          3.0          8           1
 P proline             7.6         20           1
 Q glutamine           5.3         14           1
 R arginine            4.6         12           1
 S serine              6.1         16           1
 T threonine           6.1         16           2
 V valine              6.8         18           3
 W tryptophan          1.5          4           1
 Y tyrosine            2.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HGFL protein isoform 1 
PIK3IP1               0.641   HGFL protein isoform 2 
PLAT                  0.068   plasminogen activator, tissue isoform 1 preproprotein...
PLAT                  0.068   plasminogen activator, tissue isoform 3 preproprotei...
HGFAC                 0.060   HGF activator preproprotein 
PLG                   0.058   plasminogen 
PLAU                  0.054   plasminogen activator, urokinase isoform 2 
PLAU                  0.054   plasminogen activator, urokinase isoform 1 preproprot...
HGF                   0.048   hepatocyte growth factor isoform 3 precursor 
HGF                   0.048   hepatocyte growth factor isoform 1 preproprotein [Ho...
KREMEN2               0.045   kringle-containing transmembrane protein 2 isoform b...
KREMEN2               0.045   kringle-containing transmembrane protein 2 isoform d...
F2                    0.043   coagulation factor II preproprotein 
LPA                   0.043   lipoprotein Lp(a) precursor 
HABP2                 0.039   hyaluronan binding protein 2 preproprotein 
MST1                  0.039   macrophage stimulating 1 (hepatocyte growth factor-...
KREMEN1               0.037   kringle-containing transmembrane protein 1 isoform 2...
KREMEN1               0.037   kringle-containing transmembrane protein 1 isoform ...
F12                   0.031   coagulation factor XII precursor 
ROR2                  0.027   receptor tyrosine kinase-like orphan receptor 2 prec...
HGF                   0.025   hepatocyte growth factor isoform 5 precursor 
HGF                   0.025   hepatocyte growth factor isoform 2 precursor 
HGF                   0.023   hepatocyte growth factor isoform 4 precursor 
LPAL2                 0.021   lipoprotein, Lp(a)-like 2 precursor 
LPAL2                 0.021   lipoprotein, Lp(a)-like 2 precursor 
ROR1                  0.021   receptor tyrosine kinase-like orphan receptor 1 iso...
ROR1                  0.021   receptor tyrosine kinase-like orphan receptor 1 iso...
LOC100289195          0.021   PREDICTED: hypothetical protein XP_002342719 
MYCBPAP               0.019   Myc-binding protein-associated protein 
LOC100287558          0.016   PREDICTED: hypothetical protein XP_002343325 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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