Guide to the Human Genome
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Name: PIK3IP1 Sequence: fasta or formatted (173aa) NCBI GI: 209571507
Description:

HGFL protein isoform 2

Referenced in:

Inositol Pathways

Other entries for this name:
alt prot [263aa] HGFL protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.1         21           3
 C cysteine            3.5          6           1
 D aspartate           4.6          8           1
 E glutamate           7.5         13           1
 F phenylalanine       2.3          4           1
 G glycine             9.8         17           2
 H histidine           1.2          2           1
 I isoleucine          2.3          4           1
 K lysine              2.3          4           2
 L leucine             8.7         15           2
 M methionine          1.7          3           1
 N asparagine          4.0          7           1
 P proline             8.1         14           1
 Q glutamine           4.6          8           1
 R arginine            5.8         10           1
 S serine              7.5         13           1
 T threonine           3.5          6           2
 V valine              5.8         10           1
 W tryptophan          2.3          4           1
 Y tyrosine            2.3          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HGFL protein isoform 2 
PIK3IP1               0.982   HGFL protein isoform 1 
PLAT                  0.104   plasminogen activator, tissue isoform 1 preproprotein...
PLAT                  0.104   plasminogen activator, tissue isoform 3 preproprotei...
HGFAC                 0.092   HGF activator preproprotein 
PLG                   0.089   plasminogen 
PLAU                  0.083   plasminogen activator, urokinase isoform 2 
PLAU                  0.083   plasminogen activator, urokinase isoform 1 preproprot...
HGF                   0.074   hepatocyte growth factor isoform 3 precursor 
HGF                   0.074   hepatocyte growth factor isoform 1 preproprotein [Ho...
KREMEN2               0.068   kringle-containing transmembrane protein 2 isoform b...
KREMEN2               0.068   kringle-containing transmembrane protein 2 isoform d...
F2                    0.065   coagulation factor II preproprotein 
LPA                   0.065   lipoprotein Lp(a) precursor 
HABP2                 0.059   hyaluronan binding protein 2 preproprotein 
MST1                  0.059   macrophage stimulating 1 (hepatocyte growth factor-...
KREMEN1               0.056   kringle-containing transmembrane protein 1 isoform 2...
KREMEN1               0.056   kringle-containing transmembrane protein 1 isoform ...
F12                   0.047   coagulation factor XII precursor 
ROR2                  0.042   receptor tyrosine kinase-like orphan receptor 2 prec...
HGF                   0.039   hepatocyte growth factor isoform 5 precursor 
HGF                   0.039   hepatocyte growth factor isoform 2 precursor 
HGF                   0.036   hepatocyte growth factor isoform 4 precursor 
LPAL2                 0.033   lipoprotein, Lp(a)-like 2 precursor 
LPAL2                 0.033   lipoprotein, Lp(a)-like 2 precursor 
ROR1                  0.033   receptor tyrosine kinase-like orphan receptor 1 iso...
ROR1                  0.033   receptor tyrosine kinase-like orphan receptor 1 iso...
LOC100289195          0.033   PREDICTED: hypothetical protein XP_002342719 
LOC100287558          0.024   PREDICTED: hypothetical protein XP_002343325 
TBC1D12               0.015   TBC1 domain family, member 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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