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Search of human proteins with 50593524
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50593524 hypothetical protein LOC119392 isoform b [Homo
sapiens]
(232 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|50593524 hypothetical protein LOC119392 isoform b [Homo sapiens] 453 e-128
gi|50593526 hypothetical protein LOC119392 isoform a [Homo sapiens] 453 e-128
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 38 0.006
gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member ... 38 0.008
gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member ... 38 0.008
gi|55770834 centromere protein F [Homo sapiens] 37 0.011
gi|56549091 B-cell receptor-associated protein BAP29 isoform b [... 37 0.019
gi|38044112 restin isoform b [Homo sapiens] 37 0.019
gi|4506751 restin isoform a [Homo sapiens] 37 0.019
gi|4885583 Rho-associated, coiled-coil containing protein kinase... 36 0.025
gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens] 36 0.025
gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens] 36 0.025
gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens] 36 0.025
gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens] 36 0.025
gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens] 36 0.025
gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens] 36 0.025
gi|46249351 homer 2 isoform 2 [Homo sapiens] 36 0.032
gi|38569484 kinesin family member 21A [Homo sapiens] 36 0.032
gi|156104908 myosin heavy chain 6 [Homo sapiens] 35 0.042
gi|110815815 centlein isoform 1 [Homo sapiens] 35 0.042
gi|226423889 myocardin isoform 1 [Homo sapiens] 35 0.055
gi|23957692 myocardin isoform 2 [Homo sapiens] 35 0.055
gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo s... 35 0.071
gi|100913204 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... 35 0.071
gi|100913202 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... 35 0.071
gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 iso... 35 0.071
gi|221219020 NYD-SP11 protein [Homo sapiens] 34 0.093
gi|4505531 oxysterol binding protein [Homo sapiens] 34 0.093
gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo sap... 34 0.12
gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo sap... 34 0.12
>gi|50593524 hypothetical protein LOC119392 isoform b [Homo sapiens]
Length = 232
Score = 453 bits (1166), Expect = e-128
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MESPSDSAVVLPSTPQASANPSSPYTNSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLK 60
MESPSDSAVVLPSTPQASANPSSPYTNSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLK
Sbjct: 1 MESPSDSAVVLPSTPQASANPSSPYTNSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLK 60
Query: 61 VESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSG 120
VESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSG
Sbjct: 61 VESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSG 120
Query: 121 SCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLIK 180
SCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLIK
Sbjct: 121 SCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLIK 180
Query: 181 KWRSCSQLLLYELQSAVSEENKKLSLTQLIDHYGLDDKLLHYNRSEEEFIDV 232
KWRSCSQLLLYELQSAVSEENKKLSLTQLIDHYGLDDKLLHYNRSEEEFIDV
Sbjct: 181 KWRSCSQLLLYELQSAVSEENKKLSLTQLIDHYGLDDKLLHYNRSEEEFIDV 232
>gi|50593526 hypothetical protein LOC119392 isoform a [Homo sapiens]
Length = 245
Score = 453 bits (1166), Expect = e-128
Identities = 232/232 (100%), Positives = 232/232 (100%)
Query: 1 MESPSDSAVVLPSTPQASANPSSPYTNSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLK 60
MESPSDSAVVLPSTPQASANPSSPYTNSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLK
Sbjct: 14 MESPSDSAVVLPSTPQASANPSSPYTNSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLK 73
Query: 61 VESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSG 120
VESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSG
Sbjct: 74 VESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSG 133
Query: 121 SCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLIK 180
SCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLIK
Sbjct: 134 SCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLIK 193
Query: 181 KWRSCSQLLLYELQSAVSEENKKLSLTQLIDHYGLDDKLLHYNRSEEEFIDV 232
KWRSCSQLLLYELQSAVSEENKKLSLTQLIDHYGLDDKLLHYNRSEEEFIDV
Sbjct: 194 KWRSCSQLLLYELQSAVSEENKKLSLTQLIDHYGLDDKLLHYNRSEEEFIDV 245
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 38.1 bits (87), Expect = 0.006
Identities = 48/210 (22%), Positives = 90/210 (42%), Gaps = 25/210 (11%)
Query: 44 KTRFSFNSSYNVVKRLKVESE----ENDQTFSE-----KPASSTEENCLEFQESFKHIDS 94
K + +SS + +K E E E DQ + + A S + LE+++ + +D
Sbjct: 976 KAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKNLLLEYEKQSEQLDV 1035
Query: 95 EFEENTNLKNTLKNLN--------VCESQSLDSGSCSALQNEFVSEK--LPKQRLNAEKA 144
E E N ++ +++L CE+ + D+ A S L Q L ++A
Sbjct: 1036 EKERANNFEHRIEDLTRQLRNSTLQCETINSDNEDLLARIETLQSNAKLLEVQILEVQRA 1095
Query: 145 K-LVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLIKKWRSCSQLLLYELQSAVSEENKK 203
K +V + E E L + K+ + + N+L +LQ+ ++K + Q + EL+ + +
Sbjct: 1096 KAMVDKELEAEKLQKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQT 1155
Query: 204 LSLTQLIDHY-----GLDDKLLHYNRSEEE 228
+ I Y L+ KL + N E+
Sbjct: 1156 TLMNMEIADYERLMKELNQKLTNKNNKIED 1185
Score = 31.2 bits (69), Expect = 0.79
Identities = 41/176 (23%), Positives = 84/176 (47%), Gaps = 23/176 (13%)
Query: 57 KRLKVESEENDQTFSEKPASSTEENC-LEFQESFKHIDSEFE-ENTNLKNTLKNLNVCES 114
+ L ++ EE QT S+ + +E C ++ E+ K + + E + + L ++ +S
Sbjct: 876 QNLLIQVEEVSQTCSKSEIHNEKEKCFIKEHENLKPLLEQKELRDRRAELILLKDSLAKS 935
Query: 115 QSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQ 174
S+ + S+++ + EK+ L K+ +EKE+ + ++KLV + ++K +L
Sbjct: 936 PSVKNDPLSSVKE--LEEKIEN---------LEKECKEKEEKINKIKLVAV-KAKKELDS 983
Query: 175 LQLLIKKWRSCSQLLLYELQSAVSEENK-KLSLTQLID-HYGLDDKLLHYNRSEEE 228
R +Q + EL+S SE+++ S+ LI + LL Y + E+
Sbjct: 984 S-------RKETQTVKEELESLRSEKDQLSASMRDLIQGAESYKNLLLEYEKQSEQ 1032
>gi|239757009 PREDICTED: ankyrin repeat domain 20 family, member A5
[Homo sapiens]
Length = 823
Score = 37.7 bits (86), Expect = 0.008
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 40 ERLRKTRFSFNSSYNVVKRLKVESEE-NDQTFSEKPASSTEENCLE-FQESFKHIDSEFE 97
E + KT F + N LK E+ N + EK + E +E +Q S+
Sbjct: 565 EMITKTAFWYQQELN---DLKAENTRLNSELLKEKESKKKLEAEIESYQSRLAAAISKHS 621
Query: 98 ENT----NLKNTLKNLNVCESQSLDSGSCSALQ--NEFVSEKLPKQRLNAEKAKLVKQVQ 151
EN NLK L+ Q S S ++ N F++E+L K ++ K + +
Sbjct: 622 ENVKTERNLKLALERTQDISEQVKMSSDISEIEDKNXFLTEQLSKMQIKFNTLK--DKFR 679
Query: 152 EKEDLLRRLKLVKMYRSKNDLSQLQLLIKKWRSCSQ 187
+ D LR+ K + + +NDLSQ Q IK+ + Q
Sbjct: 680 KTRDTLRK-KSLALETVQNDLSQTQQQIKEMKEMYQ 714
>gi|239751523 PREDICTED: ankyrin repeat domain 20 family, member A5
[Homo sapiens]
Length = 823
Score = 37.7 bits (86), Expect = 0.008
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 14/156 (8%)
Query: 40 ERLRKTRFSFNSSYNVVKRLKVESEE-NDQTFSEKPASSTEENCLE-FQESFKHIDSEFE 97
E + KT F + N LK E+ N + EK + E +E +Q S+
Sbjct: 565 EMITKTAFWYQQELN---DLKAENTRLNSELLKEKESKKKLEAEIESYQSRLAAAISKHS 621
Query: 98 ENT----NLKNTLKNLNVCESQSLDSGSCSALQ--NEFVSEKLPKQRLNAEKAKLVKQVQ 151
EN NLK L+ Q S S ++ N F++E+L K ++ K + +
Sbjct: 622 ENVKTERNLKLALERTQDISEQVKMSSDISEIEDKNXFLTEQLSKMQIKFNTLK--DKFR 679
Query: 152 EKEDLLRRLKLVKMYRSKNDLSQLQLLIKKWRSCSQ 187
+ D LR+ K + + +NDLSQ Q IK+ + Q
Sbjct: 680 KTRDTLRK-KSLALETVQNDLSQTQQQIKEMKEMYQ 714
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 37.4 bits (85), Expect = 0.011
Identities = 48/198 (24%), Positives = 83/198 (41%), Gaps = 45/198 (22%)
Query: 34 MSATLRERLRKTRFSFN---SSYNVVKRLKVESEENDQTFSEK--------PASSTEENC 82
M A L + L++ + N + + + +K + E N + F +K AS +EN
Sbjct: 417 MKARLTQELQQAKNMHNVLQAELDKLTSVKQQLENNLEEFKQKLCRAEQAFQASQIKENE 476
Query: 83 LE--FQESFK-------HIDSEFEENTNLKNTLKNLNVCESQSLDSGSCSALQNEFVSEK 133
L +E K H + + E +L+ LKN+ C +QS F E
Sbjct: 477 LRRSMEEMKKENNLLKSHSEQKAREVCHLEAELKNIKQCLNQS----------QNFAEEM 526
Query: 134 LPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLI---KKWRSCSQLLL 190
K N + +++ +QEK + + L +L+L + +K R CSQ LL
Sbjct: 527 KAK---NTSQETMLRDLQEK---------INQQENSLTLEKLKLAVADLEKQRDCSQDLL 574
Query: 191 YELQSAVSEENKKLSLTQ 208
+ + + + N KLS T+
Sbjct: 575 KKREHHIEQLNDKLSKTE 592
Score = 32.7 bits (73), Expect = 0.27
Identities = 37/153 (24%), Positives = 72/153 (47%), Gaps = 9/153 (5%)
Query: 58 RLKVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEF---EENTNLKNTLKNLNVCES 114
R+++E++E Q + E ++ ++++ E EEN L + E
Sbjct: 2125 RVRIEADEKKQLHIAEKLKERERENDSLKDKVENLERELQMSEENQELVILDAENSKAEV 2184
Query: 115 QSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRL-KLVKMYRS-KNDL 172
++L + ++ V E L L +EK L KQ+QEK+ L L KL+ ++S +
Sbjct: 2185 ETLKTQIEEMARSLKVFE-LDLVTLRSEKENLTKQIQEKQGQLSELDKLLSSFKSLLEEK 2243
Query: 173 SQLQLLIKKWRSCSQLLLYELQSAVSEENKKLS 205
Q ++ IK+ S+ + LQ+ + E N+ ++
Sbjct: 2244 EQAEIQIKEE---SKTAVEMLQNQLKELNEAVA 2273
Score = 29.6 bits (65), Expect = 2.3
Identities = 42/206 (20%), Positives = 77/206 (37%), Gaps = 31/206 (15%)
Query: 28 SSRKQPMSATLRE---RLRKTRFSFNSSY---NVVKRLKVESEENDQTFSEKPASSTEEN 81
+S KQ + L E +L + +F +S N ++R E ++ + E
Sbjct: 443 TSVKQQLENNLEEFKQKLCRAEQAFQASQIKENELRRSMEEMKKENNLLKSHSEQKAREV 502
Query: 82 CLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDS--GSCSALQNEFVSEKLPKQRL 139
C + K+I ++ N +K N + L + +N EKL
Sbjct: 503 C-HLEAELKNIKQCLNQSQNFAEEMKAKNTSQETMLRDLQEKINQQENSLTLEKLKLAVA 561
Query: 140 NAEKA--------------------KLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLI 179
+ EK KL K +E + LL L+L K + +L + + L
Sbjct: 562 DLEKQRDCSQDLLKKREHHIEQLNDKLSKTEKESKALLSALELKK--KEYEELKEEKTLF 619
Query: 180 KKWRSCSQLLLYELQSAVSEENKKLS 205
W+S ++ LL +++S K++
Sbjct: 620 SCWKSENEKLLTQMESEKENLQSKIN 645
>gi|56549091 B-cell receptor-associated protein BAP29 isoform b
[Homo sapiens]
Length = 241
Score = 36.6 bits (83), Expect = 0.019
Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 13/106 (12%)
Query: 54 NVVKRLKVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCE 113
N K K EEN++ + +E C+ E+ K ++ + + T L+ T
Sbjct: 143 NTNKAAKKFMEENEKLKRILKSHGKDEECVLEAENKKLVEDQEKLKTELRKT-------- 194
Query: 114 SQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRR 159
S + S QN+ + K+ +RL+ E +L+K+ E +D L R
Sbjct: 195 -----SDALSKAQNDVMEMKMQSERLSKEYDQLLKEHSELQDRLER 235
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 36.6 bits (83), Expect = 0.019
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 37 TLRERLRKTRFSFNSSYNVVKRLKVESEENDQTFS------EKPASSTEENCLEFQESF- 89
T E+L K S S +L+ ++EN + E +S ++ E + SF
Sbjct: 547 TATEKLSKENESLKS------KLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFS 600
Query: 90 KHIDSEFEENTNLKNTLKNLNVCESQSLDSGSCSALQNEFVSEKLPKQR-LNAEKAKLVK 148
K + +E E LK ++ + + +++ LQN+ SE+ + + A +AKL+K
Sbjct: 601 KGLGTETAEFAELKTQIEKMRLDYQHEIEN-----LQNQQDSERAAHAKEMEALRAKLMK 655
Query: 149 QVQEKEDLLRRLK----------LVKMYRSKNDLSQLQLLIKKWRSCSQLLLYELQSAVS 198
++EKE+ L ++ LV+M + N L + ++ +K+ L LQ+ +
Sbjct: 656 VIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKE--------LEVLQAKCN 707
Query: 199 EENK 202
E+ K
Sbjct: 708 EQTK 711
Score = 30.4 bits (67), Expect = 1.3
Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 51 SSYNVVKRLKVESEENDQTFS--EKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKN 108
S K+ + E +E ++ S EK ++ C E + ++ SE + T + L+N
Sbjct: 943 SQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETK--TKHEEILQN 1000
Query: 109 LNVCESQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRL 160
L + D + +N + ++L + R A+KAK + ++ ++ ++
Sbjct: 1001 LQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQM 1052
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 36.6 bits (83), Expect = 0.019
Identities = 44/184 (23%), Positives = 84/184 (45%), Gaps = 37/184 (20%)
Query: 37 TLRERLRKTRFSFNSSYNVVKRLKVESEENDQTFS------EKPASSTEENCLEFQESF- 89
T E+L K S S +L+ ++EN + E +S ++ E + SF
Sbjct: 582 TATEKLSKENESLKS------KLEHANKENSDVIALWKSKLETAIASHQQAMEELKVSFS 635
Query: 90 KHIDSEFEENTNLKNTLKNLNVCESQSLDSGSCSALQNEFVSEKLPKQR-LNAEKAKLVK 148
K + +E E LK ++ + + +++ LQN+ SE+ + + A +AKL+K
Sbjct: 636 KGLGTETAEFAELKTQIEKMRLDYQHEIEN-----LQNQQDSERAAHAKEMEALRAKLMK 690
Query: 149 QVQEKEDLLRRLK----------LVKMYRSKNDLSQLQLLIKKWRSCSQLLLYELQSAVS 198
++EKE+ L ++ LV+M + N L + ++ +K+ L LQ+ +
Sbjct: 691 VIKEKENSLEAIRSKLDKAEDQHLVEMEDTLNKLQEAEIKVKE--------LEVLQAKCN 742
Query: 199 EENK 202
E+ K
Sbjct: 743 EQTK 746
Score = 30.4 bits (67), Expect = 1.3
Identities = 23/112 (20%), Positives = 51/112 (45%), Gaps = 4/112 (3%)
Query: 51 SSYNVVKRLKVESEENDQTFS--EKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKN 108
S K+ + E +E ++ S EK ++ C E + ++ SE + T + L+N
Sbjct: 978 SQQEAAKKHEEEKKELERKLSDLEKKMETSHNQCQELKARYERATSETK--TKHEEILQN 1035
Query: 109 LNVCESQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRL 160
L + D + +N + ++L + R A+KAK + ++ ++ ++
Sbjct: 1036 LQKTLLDTEDKLKGAREENSGLLQELEELRKQADKAKAAQTAEDAMQIMEQM 1087
>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
[Homo sapiens]
Length = 1354
Score = 36.2 bits (82), Expect = 0.025
Identities = 49/225 (21%), Positives = 95/225 (42%), Gaps = 55/225 (24%)
Query: 17 ASANPSSPYTNSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKVESEENDQTFSEKPAS 76
+SANP+ T+S+ + +L+E L+KT + + +LK E E+ +T +
Sbjct: 407 SSANPNDNRTSSNADK----SLQESLQKTIYKLEEQLHNEMQLKDEMEQKCRTSN----- 457
Query: 77 STEENCLEFQESFKHIDSEFEENTNLKNTLKNLNV-------------------CESQSL 117
++ + K +D E + NL++T+ + E +
Sbjct: 458 ------IKLDKIMKELDEEGNQRRNLESTVSQIEKEKMLLQHRINEYQRKAEQENEKRRN 511
Query: 118 DSGSCSALQNEFVSEKLPKQR---LNAEKAKLVKQVQEKEDLLR-------RLKLVKMYR 167
S L+++ K Q N + ++L KQ++E DLLR RL+
Sbjct: 512 VENEVSTLKDQLEDLKKVSQNSQLANEKLSQLQKQLEEANDLLRTESDTAVRLRKSHTEM 571
Query: 168 SKNDLSQLQLLIKKWRSCSQLL----------LYELQSAVSEENK 202
SK+ +SQL+ L ++ + +++L Y+LQ+ + E +
Sbjct: 572 SKS-ISQLESLNRELQERNRILENSKSQTDKDYYQLQAILEAERR 615
Score = 36.2 bits (82), Expect = 0.025
Identities = 34/157 (21%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
Query: 55 VVKRLKVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCES 114
+ K +++ EN++ +EK + EE LE +E ++ + FE+N N + TLK V +
Sbjct: 948 LTKDIEILRRENEE-LTEKMKKAEEEYKLEKEEEISNLKAAFEKNINTERTLKTQAVNKL 1006
Query: 115 QSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQ 174
+ + + + + + ++ E KL ++ ++ + ++ +VK + ND+ Q
Sbjct: 1007 AEIMNRKDFKIDRKKANTQ-DLRKKEKENRKLQLELNQEREKFNQM-VVKHQKELNDM-Q 1063
Query: 175 LQLLIKKWRSCSQLLLYELQSAVSEENKKLSLTQLID 211
QL+ C+ ++Q A E + + +L+D
Sbjct: 1064 AQLV----EECAHRNELQMQLASKESDIEQLRAKLLD 1096
>gi|224809478 retinoic acid induced 14 isoform d [Homo sapiens]
Length = 983
Score = 36.2 bits (82), Expect = 0.025
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 26/149 (17%)
Query: 28 SSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKV-----ESEENDQTFSEKPASSTE--- 79
S +S L+E K + +V K++K+ ES +N F E + E
Sbjct: 478 SENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVTEEEINV 537
Query: 80 -----ENCLEFQESFKHIDSEFEENT--NLKNTLKNLNVCESQSLDSGSCSALQNEFVSE 132
+N LE E K E EE K T+ V E + + S CS ++N
Sbjct: 538 LKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIEN----- 592
Query: 133 KLPKQRLNAEKAKLVKQVQEKEDLLRRLK 161
+N EKA L ++ QE ++ + +LK
Sbjct: 593 ------MNKEKAFLFEKYQEAQEEIMKLK 615
>gi|224809476 retinoic acid induced 14 isoform c [Homo sapiens]
Length = 972
Score = 36.2 bits (82), Expect = 0.025
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 26/149 (17%)
Query: 28 SSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKV-----ESEENDQTFSEKPASSTE--- 79
S +S L+E K + +V K++K+ ES +N F E + E
Sbjct: 467 SENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVTEEEINV 526
Query: 80 -----ENCLEFQESFKHIDSEFEENT--NLKNTLKNLNVCESQSLDSGSCSALQNEFVSE 132
+N LE E K E EE K T+ V E + + S CS ++N
Sbjct: 527 LKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIEN----- 581
Query: 133 KLPKQRLNAEKAKLVKQVQEKEDLLRRLK 161
+N EKA L ++ QE ++ + +LK
Sbjct: 582 ------MNKEKAFLFEKYQEAQEEIMKLK 604
>gi|224809474 retinoic acid induced 14 isoform b [Homo sapiens]
Length = 951
Score = 36.2 bits (82), Expect = 0.025
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 26/149 (17%)
Query: 28 SSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKV-----ESEENDQTFSEKPASSTE--- 79
S +S L+E K + +V K++K+ ES +N F E + E
Sbjct: 446 SENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVTEEEINV 505
Query: 80 -----ENCLEFQESFKHIDSEFEENT--NLKNTLKNLNVCESQSLDSGSCSALQNEFVSE 132
+N LE E K E EE K T+ V E + + S CS ++N
Sbjct: 506 LKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIEN----- 560
Query: 133 KLPKQRLNAEKAKLVKQVQEKEDLLRRLK 161
+N EKA L ++ QE ++ + +LK
Sbjct: 561 ------MNKEKAFLFEKYQEAQEEIMKLK 583
>gi|224809472 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 36.2 bits (82), Expect = 0.025
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 26/149 (17%)
Query: 28 SSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKV-----ESEENDQTFSEKPASSTE--- 79
S +S L+E K + +V K++K+ ES +N F E + E
Sbjct: 475 SENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVTEEEINV 534
Query: 80 -----ENCLEFQESFKHIDSEFEENT--NLKNTLKNLNVCESQSLDSGSCSALQNEFVSE 132
+N LE E K E EE K T+ V E + + S CS ++N
Sbjct: 535 LKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIEN----- 589
Query: 133 KLPKQRLNAEKAKLVKQVQEKEDLLRRLK 161
+N EKA L ++ QE ++ + +LK
Sbjct: 590 ------MNKEKAFLFEKYQEAQEEIMKLK 612
>gi|224809470 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 36.2 bits (82), Expect = 0.025
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 26/149 (17%)
Query: 28 SSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKV-----ESEENDQTFSEKPASSTE--- 79
S +S L+E K + +V K++K+ ES +N F E + E
Sbjct: 475 SENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVTEEEINV 534
Query: 80 -----ENCLEFQESFKHIDSEFEENT--NLKNTLKNLNVCESQSLDSGSCSALQNEFVSE 132
+N LE E K E EE K T+ V E + + S CS ++N
Sbjct: 535 LKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIEN----- 589
Query: 133 KLPKQRLNAEKAKLVKQVQEKEDLLRRLK 161
+N EKA L ++ QE ++ + +LK
Sbjct: 590 ------MNKEKAFLFEKYQEAQEEIMKLK 612
>gi|224809468 retinoic acid induced 14 isoform a [Homo sapiens]
Length = 980
Score = 36.2 bits (82), Expect = 0.025
Identities = 39/149 (26%), Positives = 61/149 (40%), Gaps = 26/149 (17%)
Query: 28 SSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKV-----ESEENDQTFSEKPASSTE--- 79
S +S L+E K + +V K++K+ ES +N F E + E
Sbjct: 475 SENSSDLSQKLKETQSKYEEAMKEVLSVQKQMKLGLVSPESMDNYSHFHELRVTEEEINV 534
Query: 80 -----ENCLEFQESFKHIDSEFEENT--NLKNTLKNLNVCESQSLDSGSCSALQNEFVSE 132
+N LE E K E EE K T+ V E + + S CS ++N
Sbjct: 535 LKQDLQNALEESERNKEKVRELEEKLVEREKGTVIKPPVEEYEEMKSSYCSVIEN----- 589
Query: 133 KLPKQRLNAEKAKLVKQVQEKEDLLRRLK 161
+N EKA L ++ QE ++ + +LK
Sbjct: 590 ------MNKEKAFLFEKYQEAQEEIMKLK 612
>gi|46249351 homer 2 isoform 2 [Homo sapiens]
Length = 354
Score = 35.8 bits (81), Expect = 0.032
Identities = 37/161 (22%), Positives = 70/161 (43%), Gaps = 16/161 (9%)
Query: 12 PSTPQASANPSSPYTNSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKVESEENDQTFS 71
PS+ QAS+ + +S P + L+ K + + S VK+ ++E QT
Sbjct: 136 PSSTQASSVNGTDDEKASHAGPANTHLKSENDKLKIALTQSAANVKKWEIEL----QTLR 191
Query: 72 EKPASST---EENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSGSCSALQNE 128
E A T +E+ ++ + +EN L+N + L E Q CS + E
Sbjct: 192 ESNARLTTALQESAASVEQWKRQFSICRDENDRLRNKIDEL---EEQ------CSEINRE 242
Query: 129 FVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSK 169
K+R+ +A+L ++ E +DL ++ +++ S+
Sbjct: 243 KEKNTQLKRRIEELEAELREKETELKDLRKQSEIIPQLMSE 283
>gi|38569484 kinesin family member 21A [Homo sapiens]
Length = 1661
Score = 35.8 bits (81), Expect = 0.032
Identities = 38/155 (24%), Positives = 65/155 (41%), Gaps = 21/155 (13%)
Query: 60 KVESEENDQTFSE-KPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLD 118
K ++ + DQ E K S E N LE +ES + D E EE + E +D
Sbjct: 562 KEDNTDTDQEKKEEKGVSERENNELEVEESQEVSDHEDEEEEEEE---------EEDDID 612
Query: 119 SGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLL 178
G S +E SE K A+ A + ++ K+ L+ L +N +LQ L
Sbjct: 613 GGESS---DESDSESDEKANYQADLANITCEIAIKQKLIDEL--------ENSQKRLQTL 661
Query: 179 IKKWRSCSQLLLYELQSAVSEENKKLSLTQLIDHY 213
K++ +L ++++ E ++ L ++ Y
Sbjct: 662 KKQYEEKLMMLQHKIRDTQLERDQVLQNLGSVESY 696
Score = 30.4 bits (67), Expect = 1.3
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 62 ESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCE---SQSLD 118
ES+E E+ EE+ ++ ES DSE +E N + L N+ CE Q L
Sbjct: 590 ESQEVSDHEDEEEEEEEEEDDIDGGESSDESDSESDEKANYQADLANI-TCEIAIKQKLI 648
Query: 119 SGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLL 178
++ + +K +++L + K+ E++ +L+ L V+ Y S+ +++
Sbjct: 649 DELENSQKRLQTLKKQYEEKLMMLQHKIRDTQLERDQVLQNLGSVESY-SEEKAKKVRSE 707
Query: 179 IKKWRSCSQLLLYELQSAVSEENKKL 204
+K L LQ+A E + L
Sbjct: 708 YEKKLQAMNKELQRLQAAQKEHARLL 733
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 35.4 bits (80), Expect = 0.042
Identities = 32/126 (25%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 60 KVESEENDQTFSEKPASSTEENCLE----FQESFKHIDSEFEENTNLKNTLKNLNVCESQ 115
K E +++ S+K A S + ++ES +H+++ EN NL+ + +L ++
Sbjct: 1461 KYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDL----TE 1516
Query: 116 SLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQL 175
L G +N EK+ KQ L EK +L ++E E L + K+ R++ + +Q+
Sbjct: 1517 QLGEGG----KNVHELEKVRKQ-LEVEKLELQSALEEAEASLEH-EEGKILRAQLEFNQI 1570
Query: 176 QLLIKK 181
+ I++
Sbjct: 1571 KAEIER 1576
>gi|110815815 centlein isoform 1 [Homo sapiens]
Length = 1406
Score = 35.4 bits (80), Expect = 0.042
Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 17/144 (11%)
Query: 12 PSTPQASANPSSPYTNSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKVESEENDQTFS 71
P S +P S +T+S E L+K R + N+ K L+++S+END+
Sbjct: 509 PVKRSRSLSPKSSFTDS-----------EELQKLRKAERKIENLEKALQLKSQENDEL-- 555
Query: 72 EKPASSTEENCLEFQESFKHID---SEFEENTNLKNTLKNLNVCESQSLDSGSCSALQNE 128
+E Q +++ + ++EE + + ++ + + Q L A+ NE
Sbjct: 556 RDAHEKRKERLQMLQTNYRAVKEQLKQWEEGSGM-TEIRKIKRADPQQLRQEDSDAVWNE 614
Query: 129 FVSEKLPKQRLNAEKAKLVKQVQE 152
K Q L +K L +++ E
Sbjct: 615 LAYFKRENQELMIQKMNLEEELDE 638
>gi|226423889 myocardin isoform 1 [Homo sapiens]
Length = 986
Score = 35.0 bits (79), Expect = 0.055
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 51 SSYNVVKRLKVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLN 110
S + V +L+++ + + + + EF E KH+DS+ KN+LK
Sbjct: 14 SKFRSVLQLRLQQRRTQEQLANQGIIPPLKRPAEFHEQRKHLDSD-----KAKNSLKRKA 68
Query: 111 VCESQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEK 153
S D + LQ +P ++ ++A+L + EK
Sbjct: 69 RNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEK 111
>gi|23957692 myocardin isoform 2 [Homo sapiens]
Length = 938
Score = 35.0 bits (79), Expect = 0.055
Identities = 23/103 (22%), Positives = 43/103 (41%), Gaps = 5/103 (4%)
Query: 51 SSYNVVKRLKVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLN 110
S + V +L+++ + + + + EF E KH+DS+ KN+LK
Sbjct: 14 SKFRSVLQLRLQQRRTQEQLANQGIIPPLKRPAEFHEQRKHLDSD-----KAKNSLKRKA 68
Query: 111 VCESQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEK 153
S D + LQ +P ++ ++A+L + EK
Sbjct: 69 RNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEK 111
>gi|115496169 myosin, heavy chain 7, cardiac muscle, beta [Homo
sapiens]
Length = 1935
Score = 34.7 bits (78), Expect = 0.071
Identities = 33/126 (26%), Positives = 63/126 (50%), Gaps = 14/126 (11%)
Query: 60 KVESEENDQTFSEKPASSTEENCLE----FQESFKHIDSEFEENTNLKNTLKNLNVCESQ 115
K E +++ S+K A S + ++ES +H+++ EN NL+ + +L
Sbjct: 1459 KYEESQSELESSQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEEISDL------ 1512
Query: 116 SLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQL 175
+ GS +E EK+ KQ L AEK +L ++E E L + K+ R++ + +Q+
Sbjct: 1513 TEQLGSSGKTIHEL--EKVRKQ-LEAEKMELQSALEEAEASLEH-EEGKILRAQLEFNQI 1568
Query: 176 QLLIKK 181
+ I++
Sbjct: 1569 KAEIER 1574
>gi|100913204 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
isoform 2 [Homo sapiens]
Length = 856
Score = 34.7 bits (78), Expect = 0.071
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 29/187 (15%)
Query: 54 NVVKRLKVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNL---- 109
++V RLK E Q + ++ ++ + + K + E EE NL + +
Sbjct: 125 DLVDRLKAEQARRKQ---REERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLETG 181
Query: 110 -NVCESQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMY-- 166
+ L+SG + E+ S+ E+ K+ +V E ED L + K+Y
Sbjct: 182 PEAERLEQLESGEEELVLAEYESD---------EEKKVASRVDEDEDDLEEEHITKIYYC 232
Query: 167 -RSKNDLSQLQLLIKKWRSCSQLLLYELQS----AVSEENKKLSLTQLIDHYGLDDKLLH 221
R+ + L+Q +KK + L L S V+E+ K L QLI +D+ +
Sbjct: 233 SRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLI-----NDRCVD 287
Query: 222 YNRSEEE 228
RS E
Sbjct: 288 MQRSRHE 294
>gi|100913202 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
isoform 1 [Homo sapiens]
Length = 906
Score = 34.7 bits (78), Expect = 0.071
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 29/187 (15%)
Query: 54 NVVKRLKVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNL---- 109
++V RLK E Q + ++ ++ + + K + E EE NL + +
Sbjct: 125 DLVDRLKAEQARRKQ---REERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLETG 181
Query: 110 -NVCESQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMY-- 166
+ L+SG + E+ S+ E+ K+ +V E ED L + K+Y
Sbjct: 182 PEAERLEQLESGEEELVLAEYESD---------EEKKVASRVDEDEDDLEEEHITKIYYC 232
Query: 167 -RSKNDLSQLQLLIKKWRSCSQLLLYELQS----AVSEENKKLSLTQLIDHYGLDDKLLH 221
R+ + L+Q +KK + L L S V+E+ K L QLI +D+ +
Sbjct: 233 SRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLI-----NDRCVD 287
Query: 222 YNRSEEE 228
RS E
Sbjct: 288 MQRSRHE 294
>gi|132566527 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11
isoform 3 [Homo sapiens]
Length = 970
Score = 34.7 bits (78), Expect = 0.071
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 29/187 (15%)
Query: 54 NVVKRLKVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNL---- 109
++V RLK E Q + ++ ++ + + K + E EE NL + +
Sbjct: 125 DLVDRLKAEQARRKQ---REERLQQLQHRVQLKYAAKRLRQEEEERENLLRLSREMLETG 181
Query: 110 -NVCESQSLDSGSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMY-- 166
+ L+SG + E+ S+ E+ K+ +V E ED L + K+Y
Sbjct: 182 PEAERLEQLESGEEELVLAEYESD---------EEKKVASRVDEDEDDLEEEHITKIYYC 232
Query: 167 -RSKNDLSQLQLLIKKWRSCSQLLLYELQS----AVSEENKKLSLTQLIDHYGLDDKLLH 221
R+ + L+Q +KK + L L S V+E+ K L QLI +D+ +
Sbjct: 233 SRTHSQLAQFVHEVKKSPFGKDVRLVSLGSRQNLCVNEDVKSLGSVQLI-----NDRCVD 287
Query: 222 YNRSEEE 228
RS E
Sbjct: 288 MQRSRHE 294
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 34.3 bits (77), Expect = 0.093
Identities = 38/153 (24%), Positives = 68/153 (44%), Gaps = 19/153 (12%)
Query: 60 KVESEENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDS 119
+V+ E+++ FSE+ S +E LE QES + SE EE + + V E +
Sbjct: 2216 QVDEVESEEHFSEEMESLLDE--LEKQES---LSSEEEEEREEEEEREEEEVREEEEERK 2270
Query: 120 GSCSALQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLI 179
+ + E+ K++ EK K ++VQEKE++ + + LS +
Sbjct: 2271 EEEEGEEKQVEKEEEEKKKKKKEKKK--EEVQEKEEVFEEKEEIMSEEETESLSDEE--- 2325
Query: 180 KKWRSCS---------QLLLYELQSAVSEENKK 203
++ SCS ++L E Q + E+ +K
Sbjct: 2326 EEEESCSLEEEVDREKEILKKEKQFKLQEQRRK 2358
>gi|4505531 oxysterol binding protein [Homo sapiens]
Length = 807
Score = 34.3 bits (77), Expect = 0.093
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 19/148 (12%)
Query: 65 ENDQTFSEKPASSTEENCLEFQESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSGSCSA 124
E+D++ E+ S T++ E Q + + + S+ E+ + + + +SL
Sbjct: 189 ESDESGDEESVSQTDKT--ELQNTLRTLSSKVEDLSTCNDLIAKHGTALQRSL------- 239
Query: 125 LQNEFVSEKLPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQLLIKKWRS 184
+E S KLP AE + +KQV E+ L R + ++ L Q KKW+
Sbjct: 240 --SELESLKLP-----AESNEKIKQVNERATLFRITSNAMINACRDFLMLAQTHSKKWQK 292
Query: 185 CSQLLLYELQSAVSEENKKLSLTQLIDH 212
Q YE + E L + +H
Sbjct: 293 SLQ---YERDQRIRLEETLEQLAKQHNH 317
>gi|94721330 RUN and FYVE domain-containing 1 isoform b [Homo
sapiens]
Length = 600
Score = 33.9 bits (76), Expect = 0.12
Identities = 46/225 (20%), Positives = 91/225 (40%), Gaps = 32/225 (14%)
Query: 27 NSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKVESEENDQTFSEKPASSTEENCLEFQ 86
++ KQ LR++L + + + N+ K ++ E+ + +S E +
Sbjct: 333 DTHEKQDTLVALRQQLEEVK-----AINLQMFHKAQNAESSLQQKNEAITSFEGKTNQVM 387
Query: 87 ESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSG-------------SCSALQNEFVSEK 133
S K ++ + + + + + Q L CS+L+ E SEK
Sbjct: 388 SSMKQMEERLQHSERARQGAEERSHKLQQELGGRIGALQLQLSQLHEQCSSLEKELKSEK 447
Query: 134 LPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQ--------LLIKKWRSC 185
+Q L E Q ++ L R++L ++ K +L +LQ + ++ ++
Sbjct: 448 EQRQALQRE-----LQHEKDTSSLLRMELQQVEGLKKELRELQDEKAELQKICEEQEQAL 502
Query: 186 SQLLLYELQSAVSEENKKLSLTQLIDHYGL-DDKLLHYNRSEEEF 229
++ L+ QS + E+ K L H L DD+ H + E+EF
Sbjct: 503 QEMGLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHCRQCEKEF 547
>gi|94721332 RUN and FYVE domain-containing 1 isoform b [Homo
sapiens]
Length = 600
Score = 33.9 bits (76), Expect = 0.12
Identities = 46/225 (20%), Positives = 91/225 (40%), Gaps = 32/225 (14%)
Query: 27 NSSRKQPMSATLRERLRKTRFSFNSSYNVVKRLKVESEENDQTFSEKPASSTEENCLEFQ 86
++ KQ LR++L + + + N+ K ++ E+ + +S E +
Sbjct: 333 DTHEKQDTLVALRQQLEEVK-----AINLQMFHKAQNAESSLQQKNEAITSFEGKTNQVM 387
Query: 87 ESFKHIDSEFEENTNLKNTLKNLNVCESQSLDSG-------------SCSALQNEFVSEK 133
S K ++ + + + + + Q L CS+L+ E SEK
Sbjct: 388 SSMKQMEERLQHSERARQGAEERSHKLQQELGGRIGALQLQLSQLHEQCSSLEKELKSEK 447
Query: 134 LPKQRLNAEKAKLVKQVQEKEDLLRRLKLVKMYRSKNDLSQLQ--------LLIKKWRSC 185
+Q L E Q ++ L R++L ++ K +L +LQ + ++ ++
Sbjct: 448 EQRQALQRE-----LQHEKDTSSLLRMELQQVEGLKKELRELQDEKAELQKICEEQEQAL 502
Query: 186 SQLLLYELQSAVSEENKKLSLTQLIDHYGL-DDKLLHYNRSEEEF 229
++ L+ QS + E+ K L H L DD+ H + E+EF
Sbjct: 503 QEMGLHLSQSKLKMEDIKEVNQALKGHAWLKDDEATHCRQCEKEF 547
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.124 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,244,769
Number of Sequences: 37866
Number of extensions: 341051
Number of successful extensions: 1920
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 1830
Number of HSP's gapped (non-prelim): 258
length of query: 232
length of database: 18,247,518
effective HSP length: 99
effective length of query: 133
effective length of database: 14,498,784
effective search space: 1928338272
effective search space used: 1928338272
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.