Guide to the Human Genome
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Search of human proteins with 5031987

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]
         (207 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]        426   e-120
gi|10863927 peptidylprolyl isomerase A [Homo sapiens]                 271   4e-73
gi|45439318 peptidylprolyl isomerase E isoform 3 [Homo sapiens]       257   6e-69
gi|5174637 peptidylprolyl isomerase E isoform 1 [Homo sapiens]        257   6e-69
gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]             244   3e-65
gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]              244   3e-65
gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]              244   3e-65
gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]             244   5e-65
gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]             244   5e-65
gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]             244   5e-65
gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   243   8e-65
gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]   241   3e-64
gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]    241   3e-64
gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A iso...   241   3e-64
gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   241   4e-64
gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   241   4e-64
gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B ...   237   5e-63
gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]         237   5e-63
gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C ...   237   5e-63
gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G ...   237   6e-63
gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E ...   234   3e-62
gi|45439316 peptidylprolyl isomerase E isoform 2 [Homo sapiens]       234   4e-62
gi|150418007 RAN binding protein 2 [Homo sapiens]                     234   5e-62
gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   231   3e-61
gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   230   7e-61
gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   230   7e-61
gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]             218   3e-57
gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]             218   3e-57
gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]             218   3e-57
gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   217   5e-57

>gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]
          Length = 207

 Score =  426 bits (1096), Expect = e-120
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG 60
           MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG
Sbjct: 1   MLALRCGSRWLGLLSVPRSVPLRLPAARACSKGSGDPSSSSSSGNPLVYLDVDANGKPLG 60

Query: 61  RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI 120
           RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI
Sbjct: 61  RVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSI 120

Query: 121 YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDV 180
           YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDV
Sbjct: 121 YGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDV 180

Query: 181 VKKIESFGSKSGRTSKKIVITDCGQLS 207
           VKKIESFGSKSGRTSKKIVITDCGQLS
Sbjct: 181 VKKIESFGSKSGRTSKKIVITDCGQLS 207


>gi|10863927 peptidylprolyl isomerase A [Homo sapiens]
          Length = 165

 Score =  271 bits (692), Expect = 4e-73
 Identities = 124/162 (76%), Positives = 139/162 (85%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+ D+  +G+PLGRV  EL AD VPKTAENFRAL TGEKGFGYKGS FHR+IP FMC
Sbjct: 3   NPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT HNGTGGKSIYG +F DENF LKH GPG+LSMANAGPNTNGSQFFICT KT+WL
Sbjct: 63  QGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           DGKHVVFG VKEGM++V+ +E FGS++G+TSKKI I DCGQL
Sbjct: 123 DGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164


>gi|45439318 peptidylprolyl isomerase E isoform 3 [Homo sapiens]
          Length = 235

 Score =  257 bits (656), Expect = 6e-69
 Identities = 113/171 (66%), Positives = 139/171 (81%)

Query: 35  GDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGST 94
           G+P +  +  NP VY+D+    KP GR+ + L++DVVP TAENFR LCT EKGFG+KGS+
Sbjct: 63  GEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSS 122

Query: 95  FHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQF 154
           FHR+IP FMCQ GDFTNHNGTGGKSIYG +F DENF LKH GPG+LSMAN+GPNTNGSQF
Sbjct: 123 FHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQF 182

Query: 155 FICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205
           F+   KTDWLDGKHVVFG V EG+DV+++IE+ GSK G+  +K++I DCG+
Sbjct: 183 FLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIADCGE 233


>gi|5174637 peptidylprolyl isomerase E isoform 1 [Homo sapiens]
          Length = 301

 Score =  257 bits (656), Expect = 6e-69
 Identities = 113/171 (66%), Positives = 139/171 (81%)

Query: 35  GDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGST 94
           G+P +  +  NP VY+D+    KP GR+ + L++DVVP TAENFR LCT EKGFG+KGS+
Sbjct: 129 GEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSS 188

Query: 95  FHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQF 154
           FHR+IP FMCQ GDFTNHNGTGGKSIYG +F DENF LKH GPG+LSMAN+GPNTNGSQF
Sbjct: 189 FHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQF 248

Query: 155 FICTIKTDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205
           F+   KTDWLDGKHVVFG V EG+DV+++IE+ GSK G+  +K++I DCG+
Sbjct: 249 FLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKVIIADCGE 299


>gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  244 bits (624), Expect = 3e-65
 Identities = 114/165 (69%), Positives = 128/165 (77%)

Query: 42  SSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPS 101
           S G P V+ D+  N KPLG V  +L AD  PKTAENF AL TGEKGFGYK S FHR+IP 
Sbjct: 3   SHGQPTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPG 62

Query: 102 FMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKT 161
           FMCQ GDFT+HNGTG KSIYG +F DENF LKH GPG+ SMANAGPNTNGSQF  CT KT
Sbjct: 63  FMCQGGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKT 122

Query: 162 DWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
            WLDG HVV G VKEGM++ + +E FGS++G+TSKKI I DCGQL
Sbjct: 123 AWLDGMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQL 167


>gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  244 bits (624), Expect = 3e-65
 Identities = 114/165 (69%), Positives = 128/165 (77%)

Query: 42  SSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPS 101
           S G P V+ D+  N KPLG V  +L AD  PKTAENF AL TGEKGFGYK S FHR+IP 
Sbjct: 3   SHGQPTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPG 62

Query: 102 FMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKT 161
           FMCQ GDFT+HNGTG KSIYG +F DENF LKH GPG+ SMANAGPNTNGSQF  CT KT
Sbjct: 63  FMCQGGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKT 122

Query: 162 DWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
            WLDG HVV G VKEGM++ + +E FGS++G+TSKKI I DCGQL
Sbjct: 123 AWLDGMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQL 167


>gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  244 bits (624), Expect = 3e-65
 Identities = 114/165 (69%), Positives = 128/165 (77%)

Query: 42  SSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPS 101
           S G P V+ D+  N KPLG V  +L AD  PKTAENF AL TGEKGFGYK S FHR+IP 
Sbjct: 3   SHGQPTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPG 62

Query: 102 FMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKT 161
           FMCQ GDFT+HNGTG KSIYG +F DENF LKH GPG+ SMANAGPNTNGSQF  CT KT
Sbjct: 63  FMCQGGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKT 122

Query: 162 DWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
            WLDG HVV G VKEGM++ + +E FGS++G+TSKKI I DCGQL
Sbjct: 123 AWLDGMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQL 167


>gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  244 bits (622), Expect = 5e-65
 Identities = 110/162 (67%), Positives = 132/162 (81%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+LD+  +G+PLG +  EL AD +PKT ENF AL TGEKGFGYKGS FHR+IP  MC
Sbjct: 3   NPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT+HNGTGGKSI G +F D+NF LKH GPG+LSMAN GPNTN  Q FICT K +WL
Sbjct: 63  QRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           DGKHVVFG VKEG+++V+ +E FGS++G+TSKKI I+DCG+L
Sbjct: 123 DGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164


>gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  244 bits (622), Expect = 5e-65
 Identities = 110/162 (67%), Positives = 132/162 (81%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+LD+  +G+PLG +  EL AD +PKT ENF AL TGEKGFGYKGS FHR+IP  MC
Sbjct: 3   NPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT+HNGTGGKSI G +F D+NF LKH GPG+LSMAN GPNTN  Q FICT K +WL
Sbjct: 63  QRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           DGKHVVFG VKEG+++V+ +E FGS++G+TSKKI I+DCG+L
Sbjct: 123 DGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164


>gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  244 bits (622), Expect = 5e-65
 Identities = 110/162 (67%), Positives = 132/162 (81%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+LD+  +G+PLG +  EL AD +PKT ENF AL TGEKGFGYKGS FHR+IP  MC
Sbjct: 3   NPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT+HNGTGGKSI G +F D+NF LKH GPG+LSMAN GPNTN  Q FICT K +WL
Sbjct: 63  QRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           DGKHVVFG VKEG+++V+ +E FGS++G+TSKKI I+DCG+L
Sbjct: 123 DGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164


>gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 272

 Score =  243 bits (620), Expect = 8e-65
 Identities = 111/162 (68%), Positives = 131/162 (80%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+ D+  +GKPLG V   + AD + KTA+NFRAL TGEKG  YKGS FHR+IP FMC
Sbjct: 3   NPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT +NGTGGKS+YG +F DENF LK + PG+LSMA AGPNTNGSQFFICT KT+WL
Sbjct: 63  QGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAKTEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
            GKHVVFG VKEGM++V+ +E FGS++G+TSKKI I DCGQL
Sbjct: 123 IGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164


>gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]
          Length = 165

 Score =  241 bits (615), Expect = 3e-64
 Identities = 110/162 (67%), Positives = 130/162 (80%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+  +  +G+ LGR+  EL AD  PKTAENF AL TGEKGFGYKG  FHR+IP FMC
Sbjct: 3   NPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
             GDFT+HNGTGGKSIYG +  D+NF LKH GPG+LSMANAGPNTNGSQFFICT K++WL
Sbjct: 63  HGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           D KHVV G VKEGM++V+ +E FGS++G+TSKK+ I D GQL
Sbjct: 123 DSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQL 164


>gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]
          Length = 165

 Score =  241 bits (615), Expect = 3e-64
 Identities = 110/162 (67%), Positives = 130/162 (80%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+  +  +G+ LGR+  EL AD  PKTAENF AL TGEKGFGYKG  FHR+IP FMC
Sbjct: 3   NPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
             GDFT+HNGTGGKSIYG +  D+NF LKH GPG+LSMANAGPNTNGSQFFICT K++WL
Sbjct: 63  HGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           D KHVV G VKEGM++V+ +E FGS++G+TSKK+ I D GQL
Sbjct: 123 DSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQL 164


>gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A
           isoform 2 [Homo sapiens]
          Length = 165

 Score =  241 bits (615), Expect = 3e-64
 Identities = 110/162 (67%), Positives = 130/162 (80%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+  +  +G+ LGR+  EL AD  PKTAENF AL TGEKGFGYKG  FHR+IP FMC
Sbjct: 3   NPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
             GDFT+HNGTGGKSIYG +  D+NF LKH GPG+LSMANAGPNTNGSQFFICT K++WL
Sbjct: 63  HGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           D KHVV G VKEGM++V+ +E FGS++G+TSKK+ I D GQL
Sbjct: 123 DSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQL 164


>gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  241 bits (614), Expect = 4e-64
 Identities = 110/162 (67%), Positives = 130/162 (80%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+ D+  +GKPLG V   + AD + KTA+NFRAL TGEKG  YKGS FHR+IP FMC
Sbjct: 3   NPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT +NGTGGKS+YG +F DENF LK + PG+LSMA AGPNTNGSQFFICT  T+WL
Sbjct: 63  QGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
            GKHVVFG VKEGM++V+ +E FGS++G+TSKKI I DCGQL
Sbjct: 123 IGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164


>gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  241 bits (614), Expect = 4e-64
 Identities = 110/162 (67%), Positives = 130/162 (80%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+ D+  +GKPLG V   + AD + KTA+NFRAL TGEKG  YKGS FHR+IP FMC
Sbjct: 3   NPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT +NGTGGKS+YG +F DENF LK + PG+LSMA AGPNTNGSQFFICT  T+WL
Sbjct: 63  QGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
            GKHVVFG VKEGM++V+ +E FGS++G+TSKKI I DCGQL
Sbjct: 123 IGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164


>gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B
           [Homo sapiens]
          Length = 164

 Score =  237 bits (605), Expect = 5e-63
 Identities = 108/161 (67%), Positives = 128/161 (79%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           N +V+ D+  +GKPLGR+ ++L AD + KTAENFRAL TGEKGF YKGS FHR+IP FMC
Sbjct: 3   NSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT HNGTG KSIYG +F DEN   KH G G+LSMANAGPNTNGSQFFIC  KT+WL
Sbjct: 63  QGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205
           DGKHV FG VKE +++V+ +E FG ++ +TSKKI I DCGQ
Sbjct: 123 DGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]
          Length = 164

 Score =  237 bits (605), Expect = 5e-63
 Identities = 108/161 (67%), Positives = 128/161 (79%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           N +V+ D+  +GKPLGR+ ++L AD + KTAENFRAL TGEKGF YKGS FHR+IP FMC
Sbjct: 3   NSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT HNGTG KSIYG +F DEN   KH G G+LSMANAGPNTNGSQFFIC  KT+WL
Sbjct: 63  QGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205
           DGKHV FG VKE +++V+ +E FG ++ +TSKKI I DCGQ
Sbjct: 123 DGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C
           [Homo sapiens]
          Length = 164

 Score =  237 bits (605), Expect = 5e-63
 Identities = 108/161 (67%), Positives = 128/161 (79%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           N +V+ D+  +GKPLGR+ ++L AD + KTAENFRAL TGEKGF YKGS FHR+IP FMC
Sbjct: 3   NSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT HNGTG KSIYG +F DEN   KH G G+LSMANAGPNTNGSQFFIC  KT+WL
Sbjct: 63  QGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205
           DGKHV FG VKE +++V+ +E FG ++ +TSKKI I DCGQ
Sbjct: 123 DGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
           [Homo sapiens]
          Length = 164

 Score =  237 bits (604), Expect = 6e-63
 Identities = 107/161 (66%), Positives = 129/161 (80%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           N +++ D+  +GKPLGR+ ++  AD +PKTAENFRAL TGEKGF YKGS FHR+IP FMC
Sbjct: 3   NSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT+ NGTG KSIYG +F DEN   KH G G+LSMANAGPNTNGSQFFICT KT+WL
Sbjct: 63  QGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205
           DGKHV FG VKE +++V+ +E FG ++ +TSKKI I DCGQ
Sbjct: 123 DGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E
           [Homo sapiens]
          Length = 164

 Score =  234 bits (598), Expect = 3e-62
 Identities = 107/161 (66%), Positives = 127/161 (78%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           N +V+ ++  +GKPLGR+ ++L AD +PKTAENFRAL TGEKGF YKGS FHR+IP FMC
Sbjct: 3   NSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGFMC 62

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT  NGTG KSIYG +F DEN   KH G G+LSMANAGPNTNGSQFFIC  KT+WL
Sbjct: 63  QGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTEWL 122

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQ 205
           DGKHV FG VKE +++V+  E FG ++ +TSKKI I DCGQ
Sbjct: 123 DGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQ 163


>gi|45439316 peptidylprolyl isomerase E isoform 2 [Homo sapiens]
          Length = 296

 Score =  234 bits (597), Expect = 4e-62
 Identities = 104/151 (68%), Positives = 124/151 (82%)

Query: 35  GDPSSSSSSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGST 94
           G+P +  +  NP VY+D+    KP GR+ + L++DVVP TAENFR LCT EKGFG+KGS+
Sbjct: 129 GEPIAKKARSNPQVYMDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSS 188

Query: 95  FHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQF 154
           FHR+IP FMCQ GDFTNHNGTGGKSIYG +F DENF LKH GPG+LSMAN+GPNTNGSQF
Sbjct: 189 FHRIIPQFMCQGGDFTNHNGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQF 248

Query: 155 FICTIKTDWLDGKHVVFGHVKEGMDVVKKIE 185
           F+   KTDWLDGKHVVFG V EG+DV+++IE
Sbjct: 249 FLTCDKTDWLDGKHVVFGEVTEGLDVLRQIE 279


>gi|150418007 RAN binding protein 2 [Homo sapiens]
          Length = 3224

 Score =  234 bits (596), Expect = 5e-62
 Identities = 108/166 (65%), Positives = 131/166 (78%)

Query: 41   SSSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIP 100
            S   NP+V+ DV A+G+PLGR+ +EL +++VP+TAENFRALCTGEKGFG+K S FHRVIP
Sbjct: 3059 SKETNPVVFFDVCADGEPLGRITMELFSNIVPRTAENFRALCTGEKGFGFKNSIFHRVIP 3118

Query: 101  SFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIK 160
             F+CQ GD T H+GTGG+SIYG +F DENF +KH GPG+LSMAN G NTN SQF I   K
Sbjct: 3119 DFVCQGGDITKHDGTGGQSIYGDKFEDENFDVKHTGPGLLSMANQGQNTNNSQFVITLKK 3178

Query: 161  TDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
             + LD KHVVFG VK+GMD VKKIESFGS  G   ++I IT+CGQ+
Sbjct: 3179 AEHLDFKHVVFGFVKDGMDTVKKIESFGSPKGSVCRRITITECGQI 3224


>gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 210

 Score =  231 bits (589), Expect = 3e-61
 Identities = 109/166 (65%), Positives = 128/166 (77%)

Query: 41  SSSGNPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIP 100
           S++ NP V+ D+  +G+PLG V  EL AD  PK+AE   AL TGEKGFGYKGS FHR+IP
Sbjct: 45  SATVNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIP 104

Query: 101 SFMCQAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIK 160
            FMCQ GDFT H  TGGKS+Y  +F DENF LKH GPG+LSMANAGPNTN SQ FICT K
Sbjct: 105 GFMCQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAK 164

Query: 161 TDWLDGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           T+ LDGKHVVFG VKEGM +V+ +E FG ++G+TSK+I I DC QL
Sbjct: 165 TEGLDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQL 210


>gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  230 bits (586), Expect = 7e-61
 Identities = 108/162 (66%), Positives = 125/162 (77%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+ D+  +G+PLG V  EL AD  PK+AE   AL TGEKGFGYKGS FHR+IP FMC
Sbjct: 25  NPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFMC 84

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT H  TGGKS+Y  +F DENF LKH GPG+LSMANAGPNTN SQ FICT KT+ L
Sbjct: 85  QGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEGL 144

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           DGKHVVFG VKEGM +V+ +E FG ++G+TSK+I I DC QL
Sbjct: 145 DGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQL 186


>gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  230 bits (586), Expect = 7e-61
 Identities = 108/162 (66%), Positives = 125/162 (77%)

Query: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104
           NP V+ D+  +G+PLG V  EL AD  PK+AE   AL TGEKGFGYKGS FHR+IP FMC
Sbjct: 25  NPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFMC 84

Query: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164
           Q GDFT H  TGGKS+Y  +F DENF LKH GPG+LSMANAGPNTN SQ FICT KT+ L
Sbjct: 85  QGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEGL 144

Query: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
           DGKHVVFG VKEGM +V+ +E FG ++G+TSK+I I DC QL
Sbjct: 145 DGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQL 186


>gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  218 bits (555), Expect = 3e-57
 Identities = 99/144 (68%), Positives = 115/144 (79%)

Query: 63  VLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 122
           V +L  + + K + NF A  T EKGFGYKGS FHR+IP FMCQAGDFTNHNGTG KS+YG
Sbjct: 78  VFKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYG 137

Query: 123 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVK 182
            +F  ENF LKH GPG+LSMAN G NTN SQFFICT KT+WLDGKHVVFG VKEGM +++
Sbjct: 138 EKFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIME 197

Query: 183 KIESFGSKSGRTSKKIVITDCGQL 206
            +E FGS++G+TSKKI I DCGQL
Sbjct: 198 AMERFGSRNGKTSKKITIADCGQL 221


>gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  218 bits (555), Expect = 3e-57
 Identities = 99/144 (68%), Positives = 115/144 (79%)

Query: 63  VLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 122
           V +L  + + K + NF A  T EKGFGYKGS FHR+IP FMCQAGDFTNHNGTG KS+YG
Sbjct: 78  VFKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYG 137

Query: 123 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVK 182
            +F  ENF LKH GPG+LSMAN G NTN SQFFICT KT+WLDGKHVVFG VKEGM +++
Sbjct: 138 EKFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIME 197

Query: 183 KIESFGSKSGRTSKKIVITDCGQL 206
            +E FGS++G+TSKKI I DCGQL
Sbjct: 198 AMERFGSRNGKTSKKITIADCGQL 221


>gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  218 bits (555), Expect = 3e-57
 Identities = 99/144 (68%), Positives = 115/144 (79%)

Query: 63  VLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYG 122
           V +L  + + K + NF A  T EKGFGYKGS FHR+IP FMCQAGDFTNHNGTG KS+YG
Sbjct: 78  VFKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYG 137

Query: 123 SRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKEGMDVVK 182
            +F  ENF LKH GPG+LSMAN G NTN SQFFICT KT+WLDGKHVVFG VKEGM +++
Sbjct: 138 EKFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIME 197

Query: 183 KIESFGSKSGRTSKKIVITDCGQL 206
            +E FGS++G+TSKKI I DCGQL
Sbjct: 198 AMERFGSRNGKTSKKITIADCGQL 221


>gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  217 bits (553), Expect = 5e-57
 Identities = 98/147 (66%), Positives = 118/147 (80%)

Query: 57  KPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTG 116
           +P GR+ ++L AD  PKTAEN  AL  GEKGFGYKGS FHR+IP FMC  GDFT+HNG+G
Sbjct: 10  EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGGDFTHHNGSG 69

Query: 117 GKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKE 176
           GK IYG +F DENF LK  G G+LS  NAGPNTNGSQFFIC+ K++WLDG+HV FG VKE
Sbjct: 70  GKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGEHVFFGKVKE 129

Query: 177 GMDVVKKIESFGSKSGRTSKKIVITDC 203
           GM++V+ +E FGS++G+TSKKI I DC
Sbjct: 130 GMNIVEAMEGFGSRNGKTSKKITIADC 156


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,141,575
Number of Sequences: 37866
Number of extensions: 459784
Number of successful extensions: 1153
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1038
Number of HSP's gapped (non-prelim): 87
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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