LOC650157 7296

Name: LOC650157	Sequence: fasta or formatted (272aa)		NCBI GI: 169163387
Description: PREDICTED: similar to TRIM5/CypA fusion protein		Referenced in: Peptidylprolyl Isomerases
Other entries for this name: alt prot [234aa] PREDICTED: similar to TRIM5/CypA fusion protein alt prot [234aa] PREDICTED: similar to TRIM5/CypA fusion protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 15 1 C cysteine 3.3 9 1 D aspartate 4.0 11 2 E glutamate 4.8 13 2 F phenylalanine 6.6 18 2 G glycine 9.6 26 2 H histidine 2.2 6 1 I isoleucine 6.2 17 2 K lysine 6.6 18 2 L leucine 8.5 23 4 M methionine 1.8 5 1 N asparagine 3.3 9 2 P proline 7.7 21 3 Q glutamine 4.4 12 2 R arginine 4.0 11 1 S serine 9.6 26 3 T threonine 5.5 15 1 V valine 4.0 11 2 W tryptophan 1.1 3 1 Y tyrosine 1.1 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.775 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.775 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIA 0.509 peptidylprolyl isomerase A LOC342541 0.467 PREDICTED: similar to TRIMCyp LOC342541 0.467 PREDICTED: similar to TRIMCyp LOC342541 0.467 PREDICTED: similar to TRIMCyp LOC643997 0.459 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 0.459 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 0.459 PREDICTED: similar to peptidylprolyl isomerase A iso... PPIAL4G 0.457 peptidylprolyl isomerase A (cyclophilin A)-like 4G ... PPIAL4B 0.455 peptidylprolyl isomerase A (cyclophilin A)-like 4B ... PPIAL4A 0.455 peptidylprolyl isomerase A-like 4A PPIAL4C 0.455 peptidylprolyl isomerase A (cyclophilin A)-like 4C ... LOC131055 0.448 PREDICTED: similar to TRIMCyp LOC131055 0.448 PREDICTED: similar to TRIMCyp LOC131055 0.448 PREDICTED: similar to TRIMCyp PPIAL4E 0.442 peptidylprolyl isomerase A (cyclophilin A)-like 4E ... LOC390956 0.442 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC390956 0.442 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC390956 0.442 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC401859 0.437 PREDICTED: similar to TRIMCyp LOC401859 0.437 PREDICTED: similar to TRIMCyp LOC126170 0.414 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.414 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.414 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIF 0.405 peptidylprolyl isomerase F precursor LOC392352 0.396 PREDICTED: similar to TRIMCyp LOC392352 0.396 PREDICTED: similar to TRIMCyp LOC392352 0.396 PREDICTED: similar to TRIMCyp Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.