Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PPIE Sequence: fasta or formatted (301aa) NCBI GI: 5174637
Description:

peptidylprolyl isomerase E isoform 1

Referenced in:

Peptidylprolyl Isomerases

Other entries for this name:
alt prot [296aa] peptidylprolyl isomerase E isoform 2
alt prot [235aa] peptidylprolyl isomerase E isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         19           4
 C cysteine            1.7          5           1
 D aspartate           7.0         21           3
 E glutamate           8.6         26           3
 F phenylalanine       6.0         18           2
 G glycine            10.0         30           2
 H histidine           2.3          7           1
 I isoleucine          6.0         18           2
 K lysine              8.6         26           2
 L leucine             6.3         19           2
 M methionine          2.7          8           1
 N asparagine          4.3         13           1
 P proline             4.7         14           2
 Q glutamine           3.3         10           1
 R arginine            4.0         12           1
 S serine              5.0         15           2
 T threonine           5.3         16           2
 V valine              5.3         16           2
 W tryptophan          1.0          3           1
 Y tyrosine            1.7          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peptidylprolyl isomerase E isoform 1 
PPIE                  0.928   peptidylprolyl isomerase E isoform 2 
PPIE                  0.783   peptidylprolyl isomerase E isoform 3 
PPIF                  0.391   peptidylprolyl isomerase F precursor 
PPIA                  0.364   peptidylprolyl isomerase A 
LOC342541             0.325   PREDICTED: similar to TRIMCyp 
LOC342541             0.325   PREDICTED: similar to TRIMCyp 
LOC342541             0.325   PREDICTED: similar to TRIMCyp 
PPIAL4B               0.322   peptidylprolyl isomerase A (cyclophilin A)-like 4B ...
PPIAL4A               0.322   peptidylprolyl isomerase A-like 4A 
PPIAL4C               0.322   peptidylprolyl isomerase A (cyclophilin A)-like 4C ...
LOC650157             0.318   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
PPIAL4G               0.316   peptidylprolyl isomerase A (cyclophilin A)-like 4G ...
LOC131055             0.316   PREDICTED: similar to TRIMCyp 
LOC131055             0.316   PREDICTED: similar to TRIMCyp 
LOC131055             0.316   PREDICTED: similar to TRIMCyp 
LOC643997             0.315   PREDICTED: similar to TRIMCyp isoform 1 
LOC643997             0.315   PREDICTED: similar to TRIMCyp isoform 2 
LOC643997             0.315   PREDICTED: similar to peptidylprolyl isomerase A iso...
LOC650157             0.313   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC650157             0.313   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
PPIAL4E               0.313   peptidylprolyl isomerase A (cyclophilin A)-like 4E ...
RANBP2                0.310   RAN binding protein 2 
LOC390956             0.301   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC390956             0.296   PREDICTED: similar to TRIM5/cyclophilin A fusion pr...
LOC390956             0.296   PREDICTED: similar to TRIM5/cyclophilin A fusion pr...
LOC126170             0.296   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC126170             0.296   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC126170             0.296   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
PPID                  0.291   peptidylprolyl isomerase D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press