LOC650157 7308

Name: LOC650157	Sequence: fasta or formatted (234aa)		NCBI GI: 169163623
Description: PREDICTED: similar to TRIM5/CypA fusion protein		Referenced in: Peptidylprolyl Isomerases
Other entries for this name: alt prot [272aa] PREDICTED: similar to TRIM5/CypA fusion protein alt mRNA [234aa] PREDICTED: similar to TRIM5/CypA fusion protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 12 1 C cysteine 2.1 5 1 D aspartate 4.3 10 2 E glutamate 5.1 12 2 F phenylalanine 6.8 16 2 G glycine 10.3 24 2 H histidine 1.3 3 1 I isoleucine 6.4 15 2 K lysine 6.8 16 2 L leucine 8.1 19 4 M methionine 3.0 7 1 N asparagine 3.8 9 2 P proline 6.8 16 2 Q glutamine 4.7 11 2 R arginine 4.3 10 1 S serine 7.7 18 1 T threonine 6.0 14 1 V valine 4.7 11 2 W tryptophan 0.9 2 1 X unknown 0.4 1 1 Y tyrosine 1.3 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 1.000 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.923 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIA 0.602 peptidylprolyl isomerase A LOC342541 0.549 PREDICTED: similar to TRIMCyp LOC342541 0.549 PREDICTED: similar to TRIMCyp LOC342541 0.549 PREDICTED: similar to TRIMCyp LOC643997 0.542 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 0.542 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 0.542 PREDICTED: similar to peptidylprolyl isomerase A iso... PPIAL4G 0.538 peptidylprolyl isomerase A (cyclophilin A)-like 4G ... PPIAL4B 0.538 peptidylprolyl isomerase A (cyclophilin A)-like 4B ... PPIAL4A 0.538 peptidylprolyl isomerase A-like 4A PPIAL4C 0.538 peptidylprolyl isomerase A (cyclophilin A)-like 4C ... LOC131055 0.527 PREDICTED: similar to TRIMCyp LOC131055 0.527 PREDICTED: similar to TRIMCyp LOC131055 0.527 PREDICTED: similar to TRIMCyp PPIAL4E 0.522 peptidylprolyl isomerase A (cyclophilin A)-like 4E ... LOC390956 0.520 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC390956 0.520 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC390956 0.520 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC401859 0.515 PREDICTED: similar to TRIMCyp LOC401859 0.515 PREDICTED: similar to TRIMCyp LOC126170 0.489 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.489 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.489 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIF 0.478 peptidylprolyl isomerase F precursor LOC392352 0.465 PREDICTED: similar to TRIMCyp LOC392352 0.465 PREDICTED: similar to TRIMCyp LOC392352 0.465 PREDICTED: similar to TRIMCyp Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.