Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: PPIE Sequence: fasta or formatted (235aa) NCBI GI: 45439318
Description:

peptidylprolyl isomerase E isoform 3

Referenced in:

Peptidylprolyl Isomerases

Other entries for this name:
alt prot [296aa] peptidylprolyl isomerase E isoform 2
alt prot [301aa] peptidylprolyl isomerase E isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8          9           1
 C cysteine            2.1          5           1
 D aspartate           6.0         14           3
 E glutamate           8.1         19           3
 F phenylalanine       5.5         13           2
 G glycine            11.1         26           2
 H histidine           2.1          5           1
 I isoleucine          5.5         13           2
 K lysine              9.8         23           2
 L leucine             6.0         14           2
 M methionine          3.0          7           1
 N asparagine          5.1         12           1
 P proline             5.1         12           2
 Q glutamine           3.8          9           1
 R arginine            4.3         10           1
 S serine              6.4         15           2
 T threonine           5.1         12           1
 V valine              4.7         11           2
 W tryptophan          1.3          3           1
 Y tyrosine            1.3          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   peptidylprolyl isomerase E isoform 3 
PPIE                  1.000   peptidylprolyl isomerase E isoform 1 
PPIE                  0.908   peptidylprolyl isomerase E isoform 2 
PPIF                  0.499   peptidylprolyl isomerase F precursor 
PPIA                  0.465   peptidylprolyl isomerase A 
LOC342541             0.415   PREDICTED: similar to TRIMCyp 
LOC342541             0.415   PREDICTED: similar to TRIMCyp 
LOC342541             0.415   PREDICTED: similar to TRIMCyp 
PPIAL4B               0.411   peptidylprolyl isomerase A (cyclophilin A)-like 4B ...
PPIAL4A               0.411   peptidylprolyl isomerase A-like 4A 
PPIAL4C               0.411   peptidylprolyl isomerase A (cyclophilin A)-like 4C ...
LOC650157             0.406   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
PPIAL4G               0.404   peptidylprolyl isomerase A (cyclophilin A)-like 4G ...
LOC131055             0.404   PREDICTED: similar to TRIMCyp 
LOC131055             0.404   PREDICTED: similar to TRIMCyp 
LOC131055             0.404   PREDICTED: similar to TRIMCyp 
LOC643997             0.402   PREDICTED: similar to TRIMCyp isoform 1 
LOC643997             0.402   PREDICTED: similar to TRIMCyp isoform 2 
LOC643997             0.402   PREDICTED: similar to peptidylprolyl isomerase A iso...
LOC650157             0.400   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC650157             0.400   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
PPIAL4E               0.400   peptidylprolyl isomerase A (cyclophilin A)-like 4E ...
RANBP2                0.396   RAN binding protein 2 
LOC390956             0.385   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC390956             0.378   PREDICTED: similar to TRIM5/cyclophilin A fusion pr...
LOC390956             0.378   PREDICTED: similar to TRIM5/cyclophilin A fusion pr...
LOC126170             0.378   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC126170             0.378   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
LOC126170             0.378   PREDICTED: similar to TRIM5/CypA fusion protein [Ho...
PPID                  0.372   peptidylprolyl isomerase D 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press