LOC392352 20057

Name: LOC392352	Sequence: fasta or formatted (221aa)		NCBI GI: 239749598
Description: PREDICTED: similar to TRIMCyp		Referenced in: Peptidylprolyl Isomerases
Other entries for this name: alt mRNA [221aa] PREDICTED: similar to TRIMCyp alt mRNA [221aa] PREDICTED: similar to TRIMCyp
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.3 14 2 C cysteine 2.3 5 1 D aspartate 3.2 7 1 E glutamate 4.1 9 1 F phenylalanine 6.3 14 2 G glycine 13.1 29 2 H histidine 3.2 7 1 I isoleucine 5.9 13 3 K lysine 8.1 18 2 L leucine 7.2 16 2 M methionine 4.1 9 2 N asparagine 4.5 10 1 P proline 1.4 3 1 Q glutamine 4.1 9 2 R arginine 4.1 9 1 S serine 8.1 18 2 T threonine 5.4 12 1 V valine 5.4 12 2 W tryptophan 1.4 3 1 Y tyrosine 1.8 4 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TRIMCyp LOC392352 1.000 PREDICTED: similar to TRIMCyp LOC392352 1.000 PREDICTED: similar to TRIMCyp PPIA 0.551 peptidylprolyl isomerase A LOC131055 0.512 PREDICTED: similar to TRIMCyp LOC131055 0.512 PREDICTED: similar to TRIMCyp LOC131055 0.512 PREDICTED: similar to TRIMCyp LOC342541 0.509 PREDICTED: similar to TRIMCyp LOC342541 0.509 PREDICTED: similar to TRIMCyp LOC342541 0.509 PREDICTED: similar to TRIMCyp LOC643997 0.498 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 0.498 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 0.498 PREDICTED: similar to peptidylprolyl isomerase A iso... LOC650157 0.498 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.491 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.491 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIAL4B 0.486 peptidylprolyl isomerase A (cyclophilin A)-like 4B ... PPIAL4A 0.486 peptidylprolyl isomerase A-like 4A PPIAL4C 0.486 peptidylprolyl isomerase A (cyclophilin A)-like 4C ... LOC390956 0.479 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC390956 0.479 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC390956 0.479 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... PPIAL4G 0.477 peptidylprolyl isomerase A (cyclophilin A)-like 4G ... PPIAL4E 0.472 peptidylprolyl isomerase A (cyclophilin A)-like 4E ... LOC126170 0.456 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.456 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.456 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIF 0.451 peptidylprolyl isomerase F precursor LOC401859 0.449 PREDICTED: similar to TRIMCyp LOC401859 0.449 PREDICTED: similar to TRIMCyp Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.