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Search of human proteins with 48976054
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|48976054 hypothetical protein LOC79886 [Homo sapiens]
(361 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|48976054 hypothetical protein LOC79886 [Homo sapiens] 706 0.0
gi|34482047 adaptor-related protein complex 3, beta 2 subunit [H... 46 5e-05
gi|109255251 loricrin [Homo sapiens] 46 5e-05
gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens] 40 0.002
gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens] 40 0.003
gi|30387648 late cornified envelope 1D [Homo sapiens] 40 0.003
gi|186928829 dermokine isoform 4 precursor [Homo sapiens] 40 0.004
gi|186928827 dermokine isoform 5 precursor [Homo sapiens] 40 0.004
gi|186928825 dermokine isoform 3 precursor [Homo sapiens] 40 0.004
gi|33504489 dermokine isoform 2 precursor [Homo sapiens] 40 0.004
gi|188497689 chromatin licensing and DNA replication factor 1 [H... 39 0.006
gi|154091020 leucine-rich repeats and calponin homology (CH) dom... 39 0.006
gi|16445438 bromodomain and WD repeat domain containing 1 isofor... 39 0.007
gi|16445436 bromodomain and WD repeat domain containing 1 isofor... 39 0.007
gi|55956899 keratin 9 [Homo sapiens] 39 0.009
gi|4557595 forkhead box F2 [Homo sapiens] 39 0.009
gi|33620755 YEATS domain containing 2 [Homo sapiens] 39 0.009
gi|54400749 keratin associated protein 5-1 [Homo sapiens] 39 0.009
gi|7706435 headcase [Homo sapiens] 38 0.012
gi|21735550 mitogen-activated protein kinase kinase kinase 10 [H... 38 0.012
gi|18375613 dachshund homolog 1 isoform b [Homo sapiens] 38 0.016
gi|18375611 dachshund homolog 1 isoform a [Homo sapiens] 38 0.016
gi|18375609 dachshund homolog 1 isoform c [Homo sapiens] 38 0.016
gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 38 0.016
gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 38 0.016
gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Hom... 38 0.016
gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 fami... 37 0.021
gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32 fam... 37 0.021
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 37 0.027
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 37 0.027
>gi|48976054 hypothetical protein LOC79886 [Homo sapiens]
Length = 361
Score = 706 bits (1823), Expect = 0.0
Identities = 361/361 (100%), Positives = 361/361 (100%)
Query: 1 MTGKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANF 60
MTGKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANF
Sbjct: 1 MTGKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANF 60
Query: 61 SGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPTLEKELFLAEHS 120
SGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPTLEKELFLAEHS
Sbjct: 61 SGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPTLEKELFLAEHS 120
Query: 121 DLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEIKKLCQ 180
DLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEIKKLCQ
Sbjct: 121 DLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEIKKLCQ 180
Query: 181 EQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRENKQPE 240
EQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRENKQPE
Sbjct: 181 EQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRENKQPE 240
Query: 241 GLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQSEAGQINDLEKDIEK 300
GLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQSEAGQINDLEKDIEK
Sbjct: 241 GLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQSEAGQINDLEKDIEK 300
Query: 301 SVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKP 360
SVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKP
Sbjct: 301 SVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQLELLELEMRARAIKALMKAGDIKKP 360
Query: 361 A 361
A
Sbjct: 361 A 361
>gi|34482047 adaptor-related protein complex 3, beta 2 subunit [Homo
sapiens]
Length = 1082
Score = 46.2 bits (108), Expect = 5e-05
Identities = 40/180 (22%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 167 LKNCSIEEIKKLCQEQLELLSEKKILKILEGDNG----MDSDMEEEADDGSKMGSDLVSQ 222
++N + E K + EK EG++G DSD E E++ SK S+ S
Sbjct: 653 VRNVEVPEWTKCSNREKRKEKEKPFYSDSEGESGPTESADSDPESESESDSKSSSESGSG 712
Query: 223 QDICIDSASSVRENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPEN 282
+ SS + + + + ++G+G +S+ S+ +G + PE
Sbjct: 713 E-------SSSESDNEDQDEDEEKGRGSESE---------QSEEDGKRKTKKKVPERKGE 756
Query: 283 TVQSEAGQINDLEKDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSAQQLELLELE 342
S+ G + S +E+ +E EP + + PP P+ +++ LL+LE
Sbjct: 757 ASSSDEGS----DSSSSSSESEMTSESEEEQLEPASWSRKTPPSSKSAPATKEISLLDLE 812
>gi|109255251 loricrin [Homo sapiens]
Length = 312
Score = 46.2 bits (108), Expect = 5e-05
Identities = 33/79 (41%), Positives = 37/79 (46%), Gaps = 16/79 (20%)
Query: 15 SSQEAAAALAAPDIVPALASGSSGST----SGCGSAGGCGSVSCCGNANFS--------- 61
SSQ+ AP P+ GSSG SGC S+GG G S CG +
Sbjct: 210 SSQQVTQTSCAPQ--PSYGGGSSGGGGSGGSGCFSSGGGGGSSGCGGGSSGIGSGCIISG 267
Query: 62 -GSVTGGGSGGSCWGGSSV 79
GSV GGGS G GGSSV
Sbjct: 268 GGSVCGGGSSGGGGGGSSV 286
Score = 38.1 bits (87), Expect = 0.012
Identities = 22/45 (48%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 34 SGSSGSTSGCGSAGGCG-SVSCCGNANFSGSVTGGGSGGSCWGGS 77
SG S SGCG +GG G S CG + G GGG G C GGS
Sbjct: 42 SGGGSSGSGCGYSGGGGYSGGGCGGGSSGGG--GGGGIGGCGGGS 84
Score = 37.7 bits (86), Expect = 0.016
Identities = 20/40 (50%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 33 ASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGS 72
+ GSSG SGC S+GG G S CG + GG SGGS
Sbjct: 166 SGGSSGGGSGCFSSGG-GGGSVCGYSGGGSGCGGGSSGGS 204
Score = 36.6 bits (83), Expect = 0.036
Identities = 24/49 (48%), Positives = 27/49 (55%), Gaps = 8/49 (16%)
Query: 35 GSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGG------GSGGSCWGGS 77
GSSG SGC S+GG GS C ++ GS GG G GGS GGS
Sbjct: 95 GSSGGGSGCFSSGGGGSG--CFSSGGGGSSGGGSGCFSSGGGGSSGGGS 141
Score = 36.2 bits (82), Expect = 0.047
Identities = 23/55 (41%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 27 DIVPALASGSSGSTSG---CGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSS 78
D V G G SG CG GG GS + S GG SGG C GGSS
Sbjct: 15 DCVKTSGGGGGGGGSGGGGCGFFGGGGSGGGSSGSGCGYSGGGGYSGGGCGGGSS 69
Score = 35.4 bits (80), Expect = 0.080
Identities = 27/55 (49%), Positives = 28/55 (50%), Gaps = 12/55 (21%)
Query: 35 GSSGSTSGCGSAGGCGSV---SCC---GNANFSG------SVTGGGSGGSCWGGS 77
GSSG SGC S+GG GS S C G FSG S G SGGS GGS
Sbjct: 120 GSSGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGS 174
Score = 34.7 bits (78), Expect = 0.14
Identities = 25/52 (48%), Positives = 28/52 (53%), Gaps = 7/52 (13%)
Query: 35 GSSGSTSGCGSAGGCG----SVSCCGNANF-SGSVTGGGSG--GSCWGGSSV 79
GSSG SGC S+GG G +V C SG +GGGSG S GG SV
Sbjct: 135 GSSGGGSGCFSSGGGGFSGQAVQCQSYGGVSSGGSSGGGSGCFSSGGGGGSV 186
Score = 34.3 bits (77), Expect = 0.18
Identities = 27/70 (38%), Positives = 31/70 (44%), Gaps = 26/70 (37%)
Query: 35 GSSGSTSGCG--SAGGCGS----------VSCCGNANFSGSVTG-GGSGGS--------- 72
G SG SGCG S+GG GS SC ++ G +G GGSGGS
Sbjct: 188 GYSGGGSGCGGGSSGGSGSGYVSSQQVTQTSCAPQPSYGGGSSGGGGSGGSGCFSSGGGG 247
Query: 73 ----CWGGSS 78
C GGSS
Sbjct: 248 GSSGCGGGSS 257
Score = 33.9 bits (76), Expect = 0.23
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 35 GSSGSTSGCGSA--GGCGSVSCCGNANFSGSVTGGGSGGSCWGGS 77
G SG G GS+ GG G + CG + GSV G GGS GGS
Sbjct: 58 GYSGGGCGGGSSGGGGGGGIGGCGGGS-GGSVKYSGGGGSSGGGS 101
Score = 32.3 bits (72), Expect = 0.68
Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 38 GSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSS 78
G +SG S GG G S G +GGGSG C GGSS
Sbjct: 163 GVSSGGSSGGGSGCFSSGGGGGSVCGYSGGGSG--CGGGSS 201
Score = 32.0 bits (71), Expect = 0.88
Identities = 27/67 (40%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 36 SSGSTSGCGSAGGCGSVSCCGNANFS---GSVTGGGSG--GSCWGGSSVERSERRKRRST 90
S G SGC S+GG GS S G+ FS G +GGGSG S GG S + + +
Sbjct: 106 SGGGGSGCFSSGGGGS-SGGGSGCFSSGGGGSSGGGSGCFSSGGGGFSGQAVQCQSYGGV 164
Query: 91 DSSSVSG 97
S SG
Sbjct: 165 SSGGSSG 171
Score = 31.6 bits (70), Expect = 1.2
Identities = 21/52 (40%), Positives = 22/52 (42%), Gaps = 9/52 (17%)
Query: 35 GSSGSTSGCGSAGGCGSVSCCGNANFSGSVTG----GGSGGSC----WGGSS 78
G G GCG G GSV G SG +G GG G C GGSS
Sbjct: 72 GGGGGIGGCGGGSG-GSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSS 122
Score = 28.9 bits (63), Expect = 7.5
Identities = 16/44 (36%), Positives = 18/44 (40%)
Query: 35 GSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSS 78
GS GS G G G S C ++ GS GG GG S
Sbjct: 83 GSGGSVKYSGGGGSSGGGSGCFSSGGGGSGCFSSGGGGSSGGGS 126
>gi|9506923 cysteine-rich C-terminal 1 [Homo sapiens]
Length = 99
Score = 40.4 bits (93), Expect = 0.002
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 14 RSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGG-CGSVSCCGNAN-----FSGSVTGG 67
+ S + A AP PA AS S+S CGS G CG CCG+++ F
Sbjct: 15 KGSSQGPAPCPAPAPTPAPAS----SSSCCGSGRGCCGDSGCCGSSSTSCCCFPRRRRRQ 70
Query: 68 GSGGSCWGGSSVERSERRKRRSTDSSS 94
S G C G +RS+R RS+ S
Sbjct: 71 RSSGCCCCGGGSQRSQRSNNRSSGCCS 97
>gi|22547197 zinc finger protein of the cerebellum 2 [Homo sapiens]
Length = 532
Score = 40.0 bits (92), Expect = 0.003
Identities = 28/63 (44%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 15 SSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCW 74
S AAAA AA A+++ G SG G AGG GS G+ G GGG GGS
Sbjct: 454 SPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGG-GSGGGSGSGGGGGGA-GGGGGGSSG 511
Query: 75 GGS 77
GGS
Sbjct: 512 GGS 514
Score = 36.2 bits (82), Expect = 0.047
Identities = 25/76 (32%), Positives = 33/76 (43%)
Query: 3 GKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSG 62
G S + + S+ AAA AA A A+ S+ G +GG G S G+ + G
Sbjct: 439 GLVSPSAEPQSSSNLSPAAAAAAAAAAAAAAAVSAVHRGGGSGSGGAGGGSGGGSGSGGG 498
Query: 63 SVTGGGSGGSCWGGSS 78
GG GG GG S
Sbjct: 499 GGGAGGGGGGSSGGGS 514
>gi|30387648 late cornified envelope 1D [Homo sapiens]
Length = 114
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/66 (37%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 29 VPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRR 88
V + S SSG G S GGCGS S G G GG C RS RR+ +
Sbjct: 36 VSSCCSVSSGGCCGSSSGGGCGSNS--------GGCCSSGGGGCCLSHHRRHRSHRRRPQ 87
Query: 89 STDSSS 94
S+D S
Sbjct: 88 SSDCCS 93
>gi|186928829 dermokine isoform 4 precursor [Homo sapiens]
Length = 386
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/70 (41%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 30 PALASGSSGSTSGCGSAGGCGSVSCCGNA-NFSGSVTGGGSGGSCWGGSSVERSERRKRR 88
P SG S SG GS GS N N +GS +GG S GS GGSS S
Sbjct: 233 PPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGN 292
Query: 89 STDSSSVSGS 98
S S SGS
Sbjct: 293 SGGSRGDSGS 302
Score = 37.7 bits (86), Expect = 0.016
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDSS 93
SGS +SG GS G + S G ++ SGS +GG SGGS GGSS R ++SS
Sbjct: 248 SGSQSGSSGSGSNGDNNNGSSSGGSS-SGSSSGGSSGGSS-GGSSGNSGGSRGDSGSESS 305
Score = 34.3 bits (77), Expect = 0.18
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 33 ASGSSGSTSGC--GSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRST 90
+ GSSG +SG GS G GS S G++ S S GGSGG E+ R S
Sbjct: 282 SGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSG 341
Query: 91 DS 92
+S
Sbjct: 342 ES 343
Score = 33.9 bits (76), Expect = 0.23
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVER-SERRKRRSTDS 92
SGS+G + S+GG S S G + SG +GG SG S GGS + SE ST S
Sbjct: 257 SGSNGDNNNGSSSGGSSSGSSSGGS--SGGSSGGSSGNS--GGSRGDSGSESSWGSSTGS 312
Query: 93 SS 94
SS
Sbjct: 313 SS 314
Score = 33.1 bits (74), Expect = 0.40
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 33 ASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSG--GSCWGGSSVERSERRKRRST 90
+ GSSG +SG S GS G+ + GS TG SG G GG+ + +
Sbjct: 278 SGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEA 337
Query: 91 DSSSVSGSLQQET 103
S SG ET
Sbjct: 338 RGSGESGIQNSET 350
>gi|186928827 dermokine isoform 5 precursor [Homo sapiens]
Length = 398
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/70 (41%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 30 PALASGSSGSTSGCGSAGGCGSVSCCGNA-NFSGSVTGGGSGGSCWGGSSVERSERRKRR 88
P SG S SG GS GS N N +GS +GG S GS GGSS S
Sbjct: 233 PPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGN 292
Query: 89 STDSSSVSGS 98
S S SGS
Sbjct: 293 SGGSRGDSGS 302
Score = 37.7 bits (86), Expect = 0.016
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDSS 93
SGS +SG GS G + S G ++ SGS +GG SGGS GGSS R ++SS
Sbjct: 248 SGSQSGSSGSGSNGDNNNGSSSGGSS-SGSSSGGSSGGSS-GGSSGNSGGSRGDSGSESS 305
Score = 34.3 bits (77), Expect = 0.18
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 33 ASGSSGSTSGC--GSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRST 90
+ GSSG +SG GS G GS S G++ S S GGSGG E+ R S
Sbjct: 282 SGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSG 341
Query: 91 DS 92
+S
Sbjct: 342 ES 343
Score = 33.9 bits (76), Expect = 0.23
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVER-SERRKRRSTDS 92
SGS+G + S+GG S S G + SG +GG SG S GGS + SE ST S
Sbjct: 257 SGSNGDNNNGSSSGGSSSGSSSGGS--SGGSSGGSSGNS--GGSRGDSGSESSWGSSTGS 312
Query: 93 SS 94
SS
Sbjct: 313 SS 314
>gi|186928825 dermokine isoform 3 precursor [Homo sapiens]
Length = 416
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/70 (41%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 30 PALASGSSGSTSGCGSAGGCGSVSCCGNA-NFSGSVTGGGSGGSCWGGSSVERSERRKRR 88
P SG S SG GS GS N N +GS +GG S GS GGSS S
Sbjct: 233 PPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGN 292
Query: 89 STDSSSVSGS 98
S S SGS
Sbjct: 293 SGGSRGDSGS 302
Score = 37.7 bits (86), Expect = 0.016
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDSS 93
SGS +SG GS G + S G ++ SGS +GG SGGS GGSS R ++SS
Sbjct: 248 SGSQSGSSGSGSNGDNNNGSSSGGSS-SGSSSGGSSGGSS-GGSSGNSGGSRGDSGSESS 305
Score = 34.3 bits (77), Expect = 0.18
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 33 ASGSSGSTSGC--GSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRST 90
+ GSSG +SG GS G GS S G++ S S GGSGG E+ R S
Sbjct: 282 SGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSG 341
Query: 91 DS 92
+S
Sbjct: 342 ES 343
Score = 33.9 bits (76), Expect = 0.23
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVER-SERRKRRSTDS 92
SGS+G + S+GG S S G + SG +GG SG S GGS + SE ST S
Sbjct: 257 SGSNGDNNNGSSSGGSSSGSSSGGS--SGGSSGGSSGNS--GGSRGDSGSESSWGSSTGS 312
Query: 93 SS 94
SS
Sbjct: 313 SS 314
>gi|33504489 dermokine isoform 2 precursor [Homo sapiens]
Length = 476
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/70 (41%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 30 PALASGSSGSTSGCGSAGGCGSVSCCGNA-NFSGSVTGGGSGGSCWGGSSVERSERRKRR 88
P SG S SG GS GS N N +GS +GG S GS GGSS S
Sbjct: 233 PPSGSGGGSSNSGGGSGSQSGSSGSGSNGDNNNGSSSGGSSSGSSSGGSSGGSSGGSSGN 292
Query: 89 STDSSSVSGS 98
S S SGS
Sbjct: 293 SGGSRGDSGS 302
Score = 37.7 bits (86), Expect = 0.016
Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDSS 93
SGS +SG GS G + S G ++ SGS +GG SGGS GGSS R ++SS
Sbjct: 248 SGSQSGSSGSGSNGDNNNGSSSGGSS-SGSSSGGSSGGSS-GGSSGNSGGSRGDSGSESS 305
Score = 34.3 bits (77), Expect = 0.18
Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 33 ASGSSGSTSGC--GSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRST 90
+ GSSG +SG GS G GS S G++ S S GGSGG E+ R S
Sbjct: 282 SGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEARGSG 341
Query: 91 DS 92
+S
Sbjct: 342 ES 343
Score = 33.9 bits (76), Expect = 0.23
Identities = 27/62 (43%), Positives = 33/62 (53%), Gaps = 5/62 (8%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVER-SERRKRRSTDS 92
SGS+G + S+GG S S G + SG +GG SG S GGS + SE ST S
Sbjct: 257 SGSNGDNNNGSSSGGSSSGSSSGGS--SGGSSGGSSGNS--GGSRGDSGSESSWGSSTGS 312
Query: 93 SS 94
SS
Sbjct: 313 SS 314
Score = 33.1 bits (74), Expect = 0.40
Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 33 ASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSG--GSCWGGSSVERSERRKRRST 90
+ GSSG +SG S GS G+ + GS TG SG G GG+ + +
Sbjct: 278 SGGSSGGSSGGSSGNSGGSRGDSGSESSWGSSTGSSSGNHGGSGGGNGHKPGCEKPGNEA 337
Query: 91 DSSSVSGSLQQET 103
S SG ET
Sbjct: 338 RGSGESGIQNSET 350
>gi|188497689 chromatin licensing and DNA replication factor 1 [Homo
sapiens]
Length = 546
Score = 39.3 bits (90), Expect = 0.006
Identities = 50/213 (23%), Positives = 89/213 (41%), Gaps = 19/213 (8%)
Query: 156 EKKLQKMLPDVLKNCSIEEIKKLCQEQLELLSEKKILKILEGDNGMDSDM------EEEA 209
++ +Q M+ + C++ +IK + E+ + +G D + E+EA
Sbjct: 220 QRGVQDMMRRRFEECNVGQIKTVYPASYRFRQERSVPTFKDGTRRSDYQLTIEPLLEQEA 279
Query: 210 DDGSKM--GSDLVSQQDICIDS-ASSVRENKQPEGLELKQGKGEDSDVLSINADAYDSDI 266
D + S L+ ++ I V+E+ + L D L+ ++ D
Sbjct: 280 DGAAPQLTASRLLQRRQIFSQKLVEHVKEHHKAFLASLSPAMVVPEDQLTRWHPRFNVD- 338
Query: 267 EGPCNEEAAAPEAPENTVQSEAGQI-----NDLEKDIEKSVNEIL--GLAESSPNEPKAA 319
E P E AA P+ P + A ++ N + +EK+++++ A SSP P+ A
Sbjct: 339 EVPDIEPAALPQPPATEKLTTAQEVLARARNLISPRMEKALSQLALRSAAPSSPGSPRPA 398
Query: 320 TLAVPP--PEDVQPSAQQLELLELEMRARAIKA 350
A PP P PSA + +L R RA +A
Sbjct: 399 LPATPPATPPAASPSALKGVSQDLLERIRAKEA 431
>gi|154091020 leucine-rich repeats and calponin homology (CH)
domain containing 2 [Homo sapiens]
Length = 765
Score = 39.3 bits (90), Expect = 0.006
Identities = 22/47 (46%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 33 ASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSV 79
AS G SG G GG GS CG A G GGG GG GG+ V
Sbjct: 3 ASQGGGGNSGGGGCGGGGSSGGCGTAGGGGGGAGGGGGGG--GGTLV 47
>gi|16445438 bromodomain and WD repeat domain containing 1 isoform B
[Homo sapiens]
Length = 2269
Score = 38.9 bits (89), Expect = 0.007
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 47/312 (15%)
Query: 7 SREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTG 66
S E+R++ + L+ ++ +LA+ S S S S A S S
Sbjct: 1511 SSERRKRNRPITNGSTLSESEVEDSLATSLSSSASSSSEESKESS-----RARESSS--- 1562
Query: 67 GGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPTLEKELFLAEHSDLEEGG 126
SG S V R+ +R++ S +G ++ T+ K ++L SD +
Sbjct: 1563 -RSGLSRSSNLRVTRTRAAQRKTGPVSLANGCGRKATR-------KRVYL---SDSDNNS 1611
Query: 127 LDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEI---KKLCQEQL 183
L+ LK + + +++L++C + K K++ DV +N S E + +KL
Sbjct: 1612 LETGEILKARA---GNNRKVLRKCAAVAANKI--KLMSDVEENSSSESVCSGRKLPHRNA 1666
Query: 184 ELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRENKQPEGLE 243
++ KK+L E + + S++EEE +L + + S+S ++ E
Sbjct: 1667 SAVARKKLLHNSEDEQSLKSEIEEE---------ELKDENQLLPVSSSHTAQSNVDESEN 1717
Query: 244 LKQGKGEDSDVLSIN--ADAYDSDIEGP---------CNEEAAAPEAPENTVQSEAGQIN 292
D V N A+ Y S P +EE + ++ AG
Sbjct: 1718 RDSESESDLRVARKNWHANGYKSHTPAPSKTKFLKIESSEEDSKSHDSDHACNRTAGPST 1777
Query: 293 DLEKDIEKSVNE 304
++K +S++E
Sbjct: 1778 SVQKLKAESISE 1789
>gi|16445436 bromodomain and WD repeat domain containing 1 isoform A
[Homo sapiens]
Length = 2320
Score = 38.9 bits (89), Expect = 0.007
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 47/312 (15%)
Query: 7 SREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTG 66
S E+R++ + L+ ++ +LA+ S S S S A S S
Sbjct: 1511 SSERRKRNRPITNGSTLSESEVEDSLATSLSSSASSSSEESKESS-----RARESSS--- 1562
Query: 67 GGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPTLEKELFLAEHSDLEEGG 126
SG S V R+ +R++ S +G ++ T+ K ++L SD +
Sbjct: 1563 -RSGLSRSSNLRVTRTRAAQRKTGPVSLANGCGRKATR-------KRVYL---SDSDNNS 1611
Query: 127 LDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDVLKNCSIEEI---KKLCQEQL 183
L+ LK + + +++L++C + K K++ DV +N S E + +KL
Sbjct: 1612 LETGEILKARA---GNNRKVLRKCAAVAANKI--KLMSDVEENSSSESVCSGRKLPHRNA 1666
Query: 184 ELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRENKQPEGLE 243
++ KK+L E + + S++EEE +L + + S+S ++ E
Sbjct: 1667 SAVARKKLLHNSEDEQSLKSEIEEE---------ELKDENQLLPVSSSHTAQSNVDESEN 1717
Query: 244 LKQGKGEDSDVLSIN--ADAYDSDIEGP---------CNEEAAAPEAPENTVQSEAGQIN 292
D V N A+ Y S P +EE + ++ AG
Sbjct: 1718 RDSESESDLRVARKNWHANGYKSHTPAPSKTKFLKIESSEEDSKSHDSDHACNRTAGPST 1777
Query: 293 DLEKDIEKSVNE 304
++K +S++E
Sbjct: 1778 SVQKLKAESISE 1789
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 38.5 bits (88), Expect = 0.009
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGS 77
S GS SG GS GG G S G++ SG GGSGG+ GGS
Sbjct: 519 SYGGGSGSGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGS 562
Score = 37.7 bits (86), Expect = 0.016
Identities = 23/47 (48%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 35 GSSGSTSGCGSAGG----CGSVSCCGNANFSGSVTGGGSGGSCWGGS 77
GS GS G GS GG GS G + GS +GGGSGG GGS
Sbjct: 492 GSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGGGYGGGS 538
Score = 36.6 bits (83), Expect = 0.036
Identities = 21/46 (45%), Positives = 23/46 (50%)
Query: 37 SGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERS 82
SG SG G GG GS G ++ GS GG SGGS GG S
Sbjct: 564 SGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGSYGGGEEASGS 609
Score = 35.0 bits (79), Expect = 0.10
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 35 GSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGS 77
G SGS G G + G GS G+ SG GGGSGG GGS
Sbjct: 508 GGSGSRGGSGGSYGGGS----GSGGGSGGGYGGGSGGGHSGGS 546
Score = 35.0 bits (79), Expect = 0.10
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGS 77
SG SG G GS G GS G GS + GGSGGS GGS
Sbjct: 551 SGGSGGNYGGGSGSGGGS----GGGYGGGSGSRGGSGGSHGGGS 590
Score = 33.5 bits (75), Expect = 0.30
Identities = 20/43 (46%), Positives = 21/43 (48%), Gaps = 11/43 (25%)
Query: 35 GSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGS 77
G SG + G GS GG G GS GGGSGG GGS
Sbjct: 479 GGSGGSYGRGSRGGSG-----------GSYGGGGSGGGYGGGS 510
Score = 33.5 bits (75), Expect = 0.30
Identities = 22/54 (40%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 33 ASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSG-----GSCWGGSSVER 81
+ G SG G GS GG S G++ SG GGGSG G +GG S R
Sbjct: 526 SGGGSGGGYGGGSGGGHSGGSGGGHSGGSGGNYGGGSGSGGGSGGGYGGGSGSR 579
Score = 31.6 bits (70), Expect = 1.2
Identities = 21/63 (33%), Positives = 23/63 (36%)
Query: 36 SSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDSSSV 95
S G G GG G G+ SG GGG G +GG S R S S
Sbjct: 468 SGAGKIGLGGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSG 527
Query: 96 SGS 98
GS
Sbjct: 528 GGS 530
Score = 31.2 bits (69), Expect = 1.5
Identities = 21/44 (47%), Positives = 23/44 (52%), Gaps = 7/44 (15%)
Query: 38 GSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSG-----GSCWGG 76
GS SG GS GG G S G+ SG GGGSG G +GG
Sbjct: 561 GSGSGGGSGGGYGGGS--GSRGGSGGSHGGGSGFGGESGGSYGG 602
Score = 30.8 bits (68), Expect = 2.0
Identities = 76/336 (22%), Positives = 133/336 (39%), Gaps = 35/336 (10%)
Query: 31 ALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRST 90
+L G G + G G A G G S G F G GGGSGG GG
Sbjct: 85 SLGGGFGGGSRGFGGASGGGYSSSGG---FGGGF-GGGSGGGFGGGYGSGFGGFGGFGGG 140
Query: 91 DSSSVSGSLQQETKYILPTLEKEL--FLAEHSDLEEGGLDLTVSLKPVSFYISDKKEMLQ 148
G L K + L L +L + LEE DL ++ +Y +Q
Sbjct: 141 AGGGDGGILTANEKSTMQELNSRLASYLDKVQALEEANNDLENKIQ--DWYDKKGPAAIQ 198
Query: 149 QCFC----IIGEKKLQKMLPDVLKNCSIEEIKK----LCQEQLELLSEKKILKILEGD-N 199
+ + I + K Q + V N ++ +I L +++ E+ + + ++ D N
Sbjct: 199 KNYSPYYNTIDDLKDQIVDLTVGNNKTLLDIDNTRMTLDDFRIKFEMEQNLRQGVDADIN 258
Query: 200 GMDSDMEEEADDGSKMGSDLVSQQDICIDSASSVRENKQPEGLELKQGKGEDSDVLSINA 259
G + + D+ + SDL Q + + ++++N + E+ Q G++S +++
Sbjct: 259 G----LRQVLDNLTMEKSDLEMQYETLQEELMALKKNHKE---EMSQLTGQNSGDVNVEI 311
Query: 260 D-AYDSDIEGPCNEEAAAPEAPENTVQSEAGQINDLEKDIEKSVNEILGLAESSPNEPKA 318
+ A D+ N+ E Q A D+E E + +I SS E ++
Sbjct: 312 NVAPGKDLTKTLNDMRQEYE------QLIAKNRKDIENQYETQITQIEHEVSSSGQEVQS 365
Query: 319 ATLAVPPPEDVQPSAQQLELLELEMRARAIKALMKA 354
+ V ++ Q+LE +EL+ + AL K+
Sbjct: 366 SAKEV---TQLRHGVQELE-IELQSQLSKKAALEKS 397
Score = 29.6 bits (65), Expect = 4.4
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 34 SGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSS 78
S S S SG G GG GS ++ S +GGG GG + SS
Sbjct: 7 SSSYLSRSGGGGGGGLGSGGSIRSSYSRFSSSGGGGGGGRFSSSS 51
>gi|4557595 forkhead box F2 [Homo sapiens]
Length = 444
Score = 38.5 bits (88), Expect = 0.009
Identities = 22/66 (33%), Positives = 31/66 (46%)
Query: 19 AAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSS 78
AAAA AAP+ + +S SS S + S+ S + G G GSGG+ S
Sbjct: 35 AAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSG 94
Query: 79 VERSER 84
+ R E+
Sbjct: 95 LRRPEK 100
Score = 29.6 bits (65), Expect = 4.4
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 21 AALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVT---------GGGSGG 71
AAL +P PA A+ ++ + S+ S SC +++ S S + GGG G
Sbjct: 25 AALMSPP--PAAAAAAAAAPETTSSSSSSSSASCASSSSSSNSASAPSAACKSAGGGGAG 82
Query: 72 SCWGGSSVERSERRK 86
+ GG+ S R+
Sbjct: 83 AGSGGAKKASSGLRR 97
>gi|33620755 YEATS domain containing 2 [Homo sapiens]
Length = 1422
Score = 38.5 bits (88), Expect = 0.009
Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 24/130 (18%)
Query: 33 ASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSCWGGSSVERSERRKRRSTDS 92
ASG SG+ G G GG GS S G + GG GG+ GG T S
Sbjct: 797 ASGGSGAGGGGGGGGGGGSGS-------GGGGSTGGGGGTAGGG-------------TQS 836
Query: 93 SSVSGSLQQE---TKYILPTLEKELFLAEHSDLEEGGLDLTV-SLKPVSFYISDKKEMLQ 148
++ G + Q T YIL + FL + G LT S+ + +S Q
Sbjct: 837 TAGPGGISQHLTYTSYILKQTPQGTFLVGQPSPQTSGKQLTTGSVVQGTLGVSTSSAQGQ 896
Query: 149 QCFCIIGEKK 158
Q +I +K
Sbjct: 897 QTLKVISGQK 906
>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
Length = 278
Score = 38.5 bits (88), Expect = 0.009
Identities = 22/43 (51%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 36 SSGSTSGCGSAGGC--GSVSCCGNANFSGSVTGGGSG-GSCWG 75
S GS GCGS GGC G SC G+ GS G G GSC G
Sbjct: 72 SGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGGCGSCGG 114
Score = 34.7 bits (78), Expect = 0.14
Identities = 25/57 (43%), Positives = 27/57 (47%), Gaps = 13/57 (22%)
Query: 33 ASGSSGSTSGC--------GSAGGCGSVSCCGNANFSGSVTG--GGSGGSCWG-GSS 78
+ G GS GC GS GGCG SC G+ GS G GG G C G GSS
Sbjct: 75 SKGGCGSCGGCKGGCGSCGGSKGGCG--SCGGSKGGCGSCGGSKGGCGSGCGGCGSS 129
Score = 34.3 bits (77), Expect = 0.18
Identities = 21/42 (50%), Positives = 22/42 (52%), Gaps = 7/42 (16%)
Query: 39 STSGCGSAGGCGSVSC----CGNANFSGSVTGGGSGGSCWGG 76
S S CG GGCGS C CG+ GS G GS G C GG
Sbjct: 148 SCSSCGK-GGCGSCGCSKGACGSC--GGSKGGCGSCGGCKGG 186
Score = 34.3 bits (77), Expect = 0.18
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 4/41 (9%)
Query: 35 GSSGSTSGCGSAGGCGSVSCCGNANFSGSVTG--GGSGGSC 73
G GCGS GCG CC + + GS G GG G SC
Sbjct: 196 GCGSGCGGCGS--GCGVPVCCCSCSSCGSCAGSKGGCGSSC 234
Score = 33.9 bits (76), Expect = 0.23
Identities = 22/48 (45%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 36 SSGSTSGCG-SAGGCGSVSCC--GNANFSGSVTGGGSG-GSCWGGSSV 79
S G+ CG S GGCGS C G + GS G GSG G C G V
Sbjct: 163 SKGACGSCGGSKGGCGSCGGCKGGCGSCGGSKGGCGSGCGGCGSGCGV 210
Score = 33.1 bits (74), Expect = 0.40
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 35 GSSGSTSGCGSA-GGCGS-VSCCGNANFSGSVTGGGSGGSC 73
G G + GCGS+ GGCGS CG+ GGSG SC
Sbjct: 2 GCCGCSGGCGSSCGGCGSGCGGCGSGCGGCGSGCGGSGSSC 42
Score = 33.1 bits (74), Expect = 0.40
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Query: 35 GSSGSTSGCGSAGGCGSVSCC--GNANFSGSVTGGGSGGSCWGG 76
G G S GS GGCGS C G + GS G GS G GG
Sbjct: 65 GKGGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGGSKGG 108
Score = 32.0 bits (71), Expect = 0.88
Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 20/63 (31%)
Query: 34 SGSSGSTSGCGSAGG--CGSVSCC-----------------GNANFSGSVTGG-GSGGSC 73
SG G SGCG +G C V CC G SG GG GS G C
Sbjct: 26 SGCGGCGSGCGGSGSSCCVPVCCCKPVCCRVPTCSCSSCGKGGCGSSGGSKGGCGSCGGC 85
Query: 74 WGG 76
GG
Sbjct: 86 KGG 88
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/50 (40%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Query: 29 VPALASGSSGSTSGCGSAGGC-GSVSCCGNANFSGSVTGGGSG--GSCWG 75
VP + S G GCGS+GG G CG GG G GSC G
Sbjct: 56 VPTCSCSSCGK-GGCGSSGGSKGGCGSCGGCKGGCGSCGGSKGGCGSCGG 104
Score = 30.8 bits (68), Expect = 2.0
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Query: 43 CGSAGGCGSVSC--CGNANFSGSVTGGGSGGSCWGGSS 78
CG +GGCGS SC CG+ GG G C G S
Sbjct: 4 CGCSGGCGS-SCGGCGSGCGGCGSGCGGCGSGCGGSGS 40
Score = 29.3 bits (64), Expect = 5.7
Identities = 20/47 (42%), Positives = 20/47 (42%), Gaps = 11/47 (23%)
Query: 38 GSTSGCGSA-GGCGSVSC----------CGNANFSGSVTGGGSGGSC 73
GS GCGS GGCGS C C S S G G GSC
Sbjct: 114 GSKGGCGSGCGGCGSSCCVPVCCCKPMCCCVPACSCSSCGKGGCGSC 160
>gi|7706435 headcase [Homo sapiens]
Length = 543
Score = 38.1 bits (87), Expect = 0.012
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 3 GKKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSG 62
G+K+ R + A ALAA A A G+ + +GCG+A G+ G A G
Sbjct: 10 GRKNKRANSSGDEQENGAGALAAAGAAGAAAGGALAAAAGCGAA-AAGAPGAGGAAGAGG 68
Query: 63 SVTGGGSGGSCWGGSS 78
+ TG + + G ++
Sbjct: 69 AGTGAANAAAAAGAAA 84
>gi|21735550 mitogen-activated protein kinase kinase kinase 10 [Homo
sapiens]
Length = 954
Score = 38.1 bits (87), Expect = 0.012
Identities = 41/146 (28%), Positives = 61/146 (41%), Gaps = 19/146 (13%)
Query: 13 KRSSQEAAAALAAPDIVPALAS------GSSGSTSGCGSAGGCGSVSCCGNANFSGSVTG 66
KR + A+ A+P I+P L + GS+SG S+GG G+ S G + G
Sbjct: 494 KRKGSDGASPPASPSIIPRLRAIRLTPVDCGGSSSG-SSSGGSGTWSRGGPPK-KEELVG 551
Query: 67 GGSGGSCWGGSSVERSER---------RKRRSTDSSSVSGSLQQETKY--ILPTLEKELF 115
G G WG SS + ER S SS + +L + K+ I P
Sbjct: 552 GKKKGRTWGPSSTLQKERVGGEERLKGLGEGSKQWSSSAPNLGKSPKHTPIAPGFASLNE 611
Query: 116 LAEHSDLEEGGLDLTVSLKPVSFYIS 141
+ E ++ E+GG + S Y+S
Sbjct: 612 MEEFAEAEDGGSSVPPSPYSTPSYLS 637
>gi|18375613 dachshund homolog 1 isoform b [Homo sapiens]
Length = 558
Score = 37.7 bits (86), Expect = 0.016
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 19 AAAALAAPDIVPALASGSSG--------STSGCGSAGGCGSVSCCGNANFSGSVTGGGSG 70
A+AA AA + G G S +G G GG G +C N + + +GGG G
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
Query: 71 GSCWGGSSVERSERRKRRSTDSSSVSGS 98
G GG + + SSS S S
Sbjct: 121 GISAGGGVASSTPINASTGSSSSSSSSS 148
Score = 32.3 bits (72), Expect = 0.68
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 23 LAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSC 73
L P+ + + A+ ++ TS G GG GS G++ G GGG G +C
Sbjct: 54 LFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC 104
Score = 32.0 bits (71), Expect = 0.88
Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 19/96 (19%)
Query: 33 ASGSSGSTSGCGSAGGCGSVSCC---------GNANFSGSVTGGG----------SGGSC 73
+ G GS+ G GG G S C G+ G ++ GG S GS
Sbjct: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSS 141
Query: 74 WGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPT 109
SS S S+ SSS G L + Y P+
Sbjct: 142 SSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPS 177
>gi|18375611 dachshund homolog 1 isoform a [Homo sapiens]
Length = 706
Score = 37.7 bits (86), Expect = 0.016
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 19 AAAALAAPDIVPALASGSSG--------STSGCGSAGGCGSVSCCGNANFSGSVTGGGSG 70
A+AA AA + G G S +G G GG G +C N + + +GGG G
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
Query: 71 GSCWGGSSVERSERRKRRSTDSSSVSGS 98
G GG + + SSS S S
Sbjct: 121 GISAGGGVASSTPINASTGSSSSSSSSS 148
Score = 32.3 bits (72), Expect = 0.68
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 23 LAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSC 73
L P+ + + A+ ++ TS G GG GS G++ G GGG G +C
Sbjct: 54 LFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC 104
Score = 32.0 bits (71), Expect = 0.88
Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 19/96 (19%)
Query: 33 ASGSSGSTSGCGSAGGCGSVSCC---------GNANFSGSVTGGG----------SGGSC 73
+ G GS+ G GG G S C G+ G ++ GG S GS
Sbjct: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSS 141
Query: 74 WGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPT 109
SS S S+ SSS G L + Y P+
Sbjct: 142 SSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPS 177
>gi|18375609 dachshund homolog 1 isoform c [Homo sapiens]
Length = 504
Score = 37.7 bits (86), Expect = 0.016
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 8/88 (9%)
Query: 19 AAAALAAPDIVPALASGSSG--------STSGCGSAGGCGSVSCCGNANFSGSVTGGGSG 70
A+AA AA + G G S +G G GG G +C N + + +GGG G
Sbjct: 61 ASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGG 120
Query: 71 GSCWGGSSVERSERRKRRSTDSSSVSGS 98
G GG + + SSS S S
Sbjct: 121 GISAGGGVASSTPINASTGSSSSSSSSS 148
Score = 32.3 bits (72), Expect = 0.68
Identities = 17/51 (33%), Positives = 26/51 (50%)
Query: 23 LAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGSVTGGGSGGSC 73
L P+ + + A+ ++ TS G GG GS G++ G GGG G +C
Sbjct: 54 LFRPEPIASAAAAAATVTSTGGGGGGGGSGGGGGSSGNGGGGGGGGGGSNC 104
Score = 32.0 bits (71), Expect = 0.88
Identities = 27/96 (28%), Positives = 35/96 (36%), Gaps = 19/96 (19%)
Query: 33 ASGSSGSTSGCGSAGGCGSVSCC---------GNANFSGSVTGGG----------SGGSC 73
+ G GS+ G GG G S C G+ G ++ GG S GS
Sbjct: 82 SGGGGGSSGNGGGGGGGGGGSNCNPNLAAASNGSGGGGGGISAGGGVASSTPINASTGSS 141
Query: 74 WGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPT 109
SS S S+ SSS G L + Y P+
Sbjct: 142 SSSSSSSSSSSSSSSSSSSSSSCGPLPGKPVYSTPS 177
>gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 37.7 bits (86), Expect = 0.016
Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 12/197 (6%)
Query: 156 EKKLQKMLPDVLKNCSIEEIKKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKM 215
E Q +LP + SIEEI Q + +L S++ I +++ G + D+ E D S M
Sbjct: 261 EAAWQALLPSRVIPTSIEEIIASLQSEAQLASDQTIKELIRSVLGQNYDITME--DISLM 318
Query: 216 GSDLVSQQDICIDSASSVRENKQPEGLELKQGK--GEDSDVLSINADAYDSDIEGPCNEE 273
G + + ++ E K G E Q E S+ +S DIE +E
Sbjct: 319 GKMYLKTSPMQAETPEIQAEYKFQMGAEESQMSVHKELSETMSSILQIEQEDIEWGPSEA 378
Query: 274 AAAPEAPENTVQSEAGQINDLEKDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSA 333
+ P+ Q + + +L K +E G S E K +L PE +Q
Sbjct: 379 ESIVFKPQEISQVQPAE--ELSKPLED------GQPTSDSKEAKWVSLTAKSPEFLQIEG 430
Query: 334 QQLELLELEMRARAIKA 350
++++ + R K+
Sbjct: 431 KEIKRMRKRKSLRPRKS 447
>gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 37.7 bits (86), Expect = 0.016
Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 12/197 (6%)
Query: 156 EKKLQKMLPDVLKNCSIEEIKKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKM 215
E Q +LP + SIEEI Q + +L S++ I +++ G + D+ E D S M
Sbjct: 261 EAAWQALLPSRVIPTSIEEIIASLQSEAQLASDQTIKELIRSVLGQNYDITME--DISLM 318
Query: 216 GSDLVSQQDICIDSASSVRENKQPEGLELKQGK--GEDSDVLSINADAYDSDIEGPCNEE 273
G + + ++ E K G E Q E S+ +S DIE +E
Sbjct: 319 GKMYLKTSPMQAETPEIQAEYKFQMGAEESQMSVHKELSETMSSILQIEQEDIEWGPSEA 378
Query: 274 AAAPEAPENTVQSEAGQINDLEKDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSA 333
+ P+ Q + + +L K +E G S E K +L PE +Q
Sbjct: 379 ESIVFKPQEISQVQPAE--ELSKPLED------GQPTSDSKEAKWVSLTAKSPEFLQIEG 430
Query: 334 QQLELLELEMRARAIKA 350
++++ + R K+
Sbjct: 431 KEIKRMRKRKSLRPRKS 447
>gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Homo
sapiens]
Length = 1614
Score = 37.7 bits (86), Expect = 0.016
Identities = 47/197 (23%), Positives = 79/197 (40%), Gaps = 12/197 (6%)
Query: 156 EKKLQKMLPDVLKNCSIEEIKKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKM 215
E Q +LP + SIEEI Q + +L S++ I +++ G + D+ E D S M
Sbjct: 261 EAAWQALLPSRVIPTSIEEIIASLQSEAQLASDQTIKELIRSVLGQNYDITME--DISLM 318
Query: 216 GSDLVSQQDICIDSASSVRENKQPEGLELKQGK--GEDSDVLSINADAYDSDIEGPCNEE 273
G + + ++ E K G E Q E S+ +S DIE +E
Sbjct: 319 GKMYLKTSPMQAETPEIQAEYKFQMGAEESQMSVHKELSETMSSILQIEQEDIEWGPSEA 378
Query: 274 AAAPEAPENTVQSEAGQINDLEKDIEKSVNEILGLAESSPNEPKAATLAVPPPEDVQPSA 333
+ P+ Q + + +L K +E G S E K +L PE +Q
Sbjct: 379 ESIVFKPQEISQVQPAE--ELSKPLED------GQPTSDSKEAKWVSLTAKSPEFLQIEG 430
Query: 334 QQLELLELEMRARAIKA 350
++++ + R K+
Sbjct: 431 KEIKRMRKRKSLRPRKS 447
>gi|13569879 acidic (leucine-rich) nuclear phosphoprotein 32 family,
member E isoform 1 [Homo sapiens]
Length = 268
Score = 37.4 bits (85), Expect = 0.021
Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 11/202 (5%)
Query: 107 LPTLEKELFLAEHSDLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDV 166
LP+L K L ++ GGL++ P Y++ ++ + + L+ +
Sbjct: 60 LPSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLD 119
Query: 167 LKNCSIEEIKKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDIC 226
L NC I ++ + ELL + L + ++ D EEE D+ +D
Sbjct: 120 LFNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDED--------GDED-- 169
Query: 227 IDSASSVRENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQS 286
D E PEG E ++ + E+ D + G EE + +Q
Sbjct: 170 -DEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQD 228
Query: 287 EAGQINDLEKDIEKSVNEILGL 308
E + +E+ E+ E GL
Sbjct: 229 EEDDDDYVEEGEEEEEEEEGGL 250
>gi|210147571 acidic (leucine-rich) nuclear phosphoprotein 32
family, member E isoform 3 [Homo sapiens]
Length = 220
Score = 37.4 bits (85), Expect = 0.021
Identities = 43/202 (21%), Positives = 76/202 (37%), Gaps = 11/202 (5%)
Query: 107 LPTLEKELFLAEHSDLEEGGLDLTVSLKPVSFYISDKKEMLQQCFCIIGEKKLQKMLPDV 166
LP+L K L ++ GGL++ P Y++ ++ + + L+ +
Sbjct: 12 LPSLNKLRKLELSDNIISGGLEVLAEKCPNLTYLNLSGNKIKDLSTVEALQNLKNLKSLD 71
Query: 167 LKNCSIEEIKKLCQEQLELLSEKKILKILEGDNGMDSDMEEEADDGSKMGSDLVSQQDIC 226
L NC I ++ + ELL + L + ++ D EEE D+ +D
Sbjct: 72 LFNCEITNLEDYRESIFELLQQITYLDGFDQEDNEAPDSEEEDDED--------GDED-- 121
Query: 227 IDSASSVRENKQPEGLELKQGKGEDSDVLSINADAYDSDIEGPCNEEAAAPEAPENTVQS 286
D E PEG E ++ + E+ D + G EE + +Q
Sbjct: 122 -DEEEEENEAGPPEGYEEEEEEEEEEDEDEDEDEDEAGSELGEGEEEVGLSYLMKEEIQD 180
Query: 287 EAGQINDLEKDIEKSVNEILGL 308
E + +E+ E+ E GL
Sbjct: 181 EEDDDDYVEEGEEEEEEEEGGL 202
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 37.0 bits (84), Expect = 0.027
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 4 KKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGS 63
K R+K RKR S + ++ + ++ SSGS++ GS+ G S S + S +
Sbjct: 55 KDRGRDKTRKRRSASSGSSSTRSR---SSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST 111
Query: 64 VTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPT 109
S S S R +RRS S ++E K P+
Sbjct: 112 SRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 37.0 bits (84), Expect = 0.027
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 4 KKSSREKRRKRSSQEAAAALAAPDIVPALASGSSGSTSGCGSAGGCGSVSCCGNANFSGS 63
K R+K RKR S + ++ + ++ SSGS++ GS+ G S S + S +
Sbjct: 55 KDRGRDKTRKRRSASSGSSSTRSR---SSSTSSSGSSTSTGSSSGSSSSSASSRSGSSST 111
Query: 64 VTGGGSGGSCWGGSSVERSERRKRRSTDSSSVSGSLQQETKYILPT 109
S S S R +RRS S ++E K P+
Sbjct: 112 SRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.307 0.126 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,420,298
Number of Sequences: 37866
Number of extensions: 722802
Number of successful extensions: 6609
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 245
Number of HSP's that attempted gapping in prelim test: 4614
Number of HSP's gapped (non-prelim): 1460
length of query: 361
length of database: 18,247,518
effective HSP length: 104
effective length of query: 257
effective length of database: 14,309,454
effective search space: 3677529678
effective search space used: 3677529678
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.