Guide to the Human Genome
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Name: GZMM Sequence: fasta or formatted (257aa) NCBI GI: 4885369
Description:

granzyme M precursor

Referenced in:

Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         24           2
 C cysteine            3.5          9           1
 D aspartate           3.5          9           1
 E glutamate           1.6          4           1
 F phenylalanine       1.9          5           1
 G glycine             9.3         24           2
 H histidine           3.1          8           1
 I isoleucine          3.1          8           2
 K lysine              4.3         11           1
 L leucine            13.2         34           2
 M methionine          2.3          6           1
 N asparagine          1.9          5           2
 P proline             6.2         16           2
 Q glutamine           3.9         10           1
 R arginine            7.4         19           1
 S serine              9.3         24           2
 T threonine           4.3         11           1
 V valine              8.9         23           2
 W tryptophan          1.6          4           1
 Y tyrosine            1.2          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   granzyme M precursor 
CFD                   0.324   complement factor D preproprotein 
PRSSL1                0.296   protease, serine-like 1 
GZMK                  0.265   granzyme K precursor 
KLK4                  0.253   kallikrein-related peptidase 4 preproprotein 
TMPRSS3               0.249   transmembrane protease, serine 3 isoform 1 
GZMB                  0.241   granzyme B precursor 
GZMA                  0.241   granzyme A precursor 
KLK11                 0.231   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.231   kallikrein 11 isoform 2 precursor 
KLK11                 0.231   kallikrein 11 isoform 1 preproprotein 
GZMH                  0.231   granzyme H 
CTSG                  0.231   cathepsin G preproprotein 
CELA2A                0.229   elastase 2A preproprotein 
ELANE                 0.227   neutrophil elastase preproprotein 
KLK15                 0.225   kallikrein-related peptidase 15 isoform 4 preproprot...
PRTN3                 0.225   myeloblastin 
TMPRSS5               0.225   transmembrane protease, serine 5 
KLK13                 0.221   kallikrein 13 precursor 
CORIN                 0.221   corin 
HPN                   0.221   hepsin 
HPN                   0.221   hepsin 
PLG                   0.217   plasminogen 
KLK8                  0.213   kallikrein 8 isoform 1 preproprotein 
CELA1                 0.213   chymotrypsin-like elastase family, member 1 
TMPRSS2               0.211   transmembrane protease, serine 2 isoform 1 
TMPRSS2               0.211   transmembrane protease, serine 2 isoform 2 
AZU1                  0.211   azurocidin 1 preproprotein 
KLK8                  0.211   kallikrein 8 isoform 2 
TMPRSS6               0.211   transmembrane protease, serine 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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