Guide to the Human Genome
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Name: CTSG Sequence: fasta or formatted (255aa) NCBI GI: 4503149
Description:

cathepsin G preproprotein

Referenced in:

Neutrophils, Eosinophils, and Basophils
Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.3         16           2
 C cysteine            2.4          6           1
 D aspartate           3.1          8           1
 E glutamate           3.9         10           1
 F phenylalanine       3.1          8           1
 G glycine             8.6         22           2
 H histidine           2.4          6           1
 I isoleucine          5.1         13           2
 K lysine              1.6          4           1
 L leucine            10.2         26           5
 M methionine          2.4          6           1
 N asparagine          4.3         11           2
 P proline             5.9         15           2
 Q glutamine           6.7         17           2
 R arginine           13.3         34           2
 S serine              5.9         15           2
 T threonine           5.5         14           2
 V valine              6.3         16           1
 W tryptophan          1.2          3           1
 Y tyrosine            2.0          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cathepsin G preproprotein 
GZMB                  0.541   granzyme B precursor 
GZMH                  0.533   granzyme H 
CMA1                  0.451   chymase 1, mast cell preproprotein 
PRTN3                 0.271   myeloblastin 
KLK15                 0.257   kallikrein-related peptidase 15 isoform 4 preproprot...
PRSS1                 0.255   protease, serine, 1 preproprotein 
CFD                   0.251   complement factor D preproprotein 
KLK14                 0.246   kallikrein 14 preproprotein 
GZMA                  0.246   granzyme A precursor 
GZMK                  0.240   granzyme K precursor 
KLK13                 0.236   kallikrein 13 precursor 
PRSS2                 0.232   protease, serine, 2 preproprotein 
PRSS3                 0.232   mesotrypsin isoform 2 preproprotein 
PRSS3                 0.232   mesotrypsin isoform 1 preproprotein 
GZMM                  0.230   granzyme M precursor 
KLK4                  0.228   kallikrein-related peptidase 4 preproprotein 
KLK6                  0.226   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.226   kallikrein-related peptidase 6 isoform A preproprotei...
ELANE                 0.226   neutrophil elastase preproprotein 
PRSSL1                0.226   protease, serine-like 1 
KLK8                  0.224   kallikrein 8 isoform 1 preproprotein 
KLK8                  0.222   kallikrein 8 isoform 2 
KLK7                  0.218   stratum corneum chymotryptic enzyme preproprotein [H...
KLK7                  0.218   stratum corneum chymotryptic enzyme preproprotein [Ho...
KLK11                 0.210   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.210   kallikrein 11 isoform 2 precursor 
KLK11                 0.210   kallikrein 11 isoform 1 preproprotein 
OVCH1                 0.202   ovochymase 1 
KLK2                  0.198   kallikrein 2, prostatic isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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