Guide to the Human Genome
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Name: AZU1 Sequence: fasta or formatted (251aa) NCBI GI: 11342670
Description:

azurocidin 1 preproprotein

Referenced in:

Neutrophils, Eosinophils, and Basophils
Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         19           2
 C cysteine            3.2          8           1
 D aspartate           4.0         10           1
 E glutamate           2.4          6           1
 F phenylalanine       4.8         12           2
 G glycine            11.6         29           2
 H histidine           1.2          3           1
 I isoleucine          2.8          7           1
 K lysine              0.4          1           1
 L leucine            11.2         28           2
 M methionine          1.6          4           1
 N asparagine          5.2         13           2
 P proline             6.4         16           1
 Q glutamine           5.6         14           2
 R arginine            9.6         24           3
 S serine              8.0         20           2
 T threonine           6.0         15           1
 V valine              7.2         18           2
 W tryptophan          0.8          2           1
 Y tyrosine            0.8          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   azurocidin 1 preproprotein 
ELANE                 0.358   neutrophil elastase preproprotein 
PRTN3                 0.344   myeloblastin 
PRSSL1                0.230   protease, serine-like 1 
CFD                   0.218   complement factor D preproprotein 
GZMM                  0.214   granzyme M precursor 
GZMA                  0.208   granzyme A precursor 
CTSG                  0.202   cathepsin G preproprotein 
TMPRSS6               0.200   transmembrane protease, serine 6 
KLK4                  0.191   kallikrein-related peptidase 4 preproprotein 
GZMH                  0.191   granzyme H 
KLK14                 0.189   kallikrein 14 preproprotein 
GZMK                  0.185   granzyme K precursor 
KLK8                  0.185   kallikrein 8 isoform 1 preproprotein 
KLK3                  0.183   prostate specific antigen isoform 1 preproprotein [Ho...
KLK8                  0.183   kallikrein 8 isoform 2 
GZMB                  0.181   granzyme B precursor 
KLK11                 0.173   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.173   kallikrein 11 isoform 2 precursor 
KLK11                 0.173   kallikrein 11 isoform 1 preproprotein 
KLK7                  0.167   stratum corneum chymotryptic enzyme preproprotein [H...
KLK7                  0.167   stratum corneum chymotryptic enzyme preproprotein [Ho...
CMA1                  0.167   chymase 1, mast cell preproprotein 
KLK2                  0.165   kallikrein 2, prostatic isoform 1 
LPA                   0.163   lipoprotein Lp(a) precursor 
KLK6                  0.163   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.163   kallikrein-related peptidase 6 isoform A preproprotei...
KLK13                 0.160   kallikrein 13 precursor 
HGFAC                 0.156   HGF activator preproprotein 
PRSS1                 0.154   protease, serine, 1 preproprotein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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