Guide to the Human Genome
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Name: GZMA Sequence: fasta or formatted (262aa) NCBI GI: 5453676
Description:

granzyme A precursor

Referenced in:

Serine Proteases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         13           2
 C cysteine            3.8         10           1
 D aspartate           5.0         13           2
 E glutamate           4.2         11           2
 F phenylalanine       1.9          5           1
 G glycine             8.4         22           2
 H histidine           2.7          7           1
 I isoleucine          6.9         18           2
 K lysine              7.3         19           2
 L leucine            10.3         27           3
 M methionine          2.7          7           1
 N asparagine          5.7         15           1
 P proline             5.0         13           1
 Q glutamine           1.5          4           1
 R arginine            5.7         15           1
 S serine              6.9         18           2
 T threonine           5.3         14           1
 V valine              7.6         20           3
 W tryptophan          1.5          4           1
 Y tyrosine            2.7          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   granzyme A precursor 
GZMK                  0.360   granzyme K precursor 
CFD                   0.295   complement factor D preproprotein 
GZMB                  0.275   granzyme B precursor 
GZMH                  0.273   granzyme H 
CMA1                  0.260   chymase 1, mast cell preproprotein 
KLK14                 0.258   kallikrein 14 preproprotein 
KLK8                  0.242   kallikrein 8 isoform 2 
KLK8                  0.242   kallikrein 8 isoform 1 preproprotein 
CTSG                  0.236   cathepsin G preproprotein 
GZMM                  0.231   granzyme M precursor 
KLK3                  0.227   prostate specific antigen isoform 1 preproprotein [Ho...
PRSS1                 0.225   protease, serine, 1 preproprotein 
KLK13                 0.225   kallikrein 13 precursor 
KLK11                 0.217   kallikrein 11 isoform 1 preproprotein 
KLK11                 0.217   kallikrein 11 isoform 2 precursor 
KLK11                 0.217   kallikrein 11 isoform 1 preproprotein 
KLK15                 0.217   kallikrein-related peptidase 15 isoform 4 preproprot...
KLK6                  0.217   kallikrein-related peptidase 6 isoform A preproprote...
KLK6                  0.217   kallikrein-related peptidase 6 isoform A preproprotei...
PRSSL1                0.217   protease, serine-like 1 
KLK12                 0.217   kallikrein 12 isoform 2 
KLK2                  0.215   kallikrein 2, prostatic isoform 1 
KLK4                  0.213   kallikrein-related peptidase 4 preproprotein 
ELANE                 0.213   neutrophil elastase preproprotein 
KLK1                  0.211   kallikrein 1 preproprotein 
PRSS8                 0.207   prostasin preproprotein 
PRSS3                 0.207   mesotrypsin isoform 2 preproprotein 
KLK12                 0.205   kallikrein 12 isoform 1 
PLG                   0.203   plasminogen 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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