BLOC1S2 30890

Name: BLOC1S2	Sequence: fasta or formatted (99aa)		NCBI GI: 47717129
Description: biogenesis of lysosome-related organelles complex-1, subunit 2 isoform 2		Referenced in: Lysosomes and Related Organelles
Other entries for this name: alt prot [142aa] biogenesis of lysosome-related organelles complex-1, subunit 2 is...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 10 2 C cysteine 0.0 0 0 D aspartate 5.1 5 1 E glutamate 9.1 9 2 F phenylalanine 1.0 1 1 G glycine 2.0 2 1 H histidine 0.0 0 0 I isoleucine 5.1 5 1 K lysine 14.1 14 2 L leucine 15.2 15 2 M methionine 4.0 4 1 N asparagine 6.1 6 1 P proline 1.0 1 1 Q glutamine 5.1 5 1 R arginine 2.0 2 1 S serine 5.1 5 1 T threonine 5.1 5 1 V valine 2.0 2 1 W tryptophan 0.0 0 0 Y tyrosine 8.1 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 biogenesis of lysosome-related organelles complex-1,... BLOC1S2 1.000 biogenesis of lysosome-related organelles complex-1,... CCDC141 0.071 coiled-coil domain containing 141 CAGE1 0.054 cancer antigen 1 KIAA0947 0.048 hypothetical protein LOC23379 MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM1A [Ho... MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM1B [Ho... MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM2B [Ho... MYH11 0.048 smooth muscle myosin heavy chain 11 isoform SM2A [Ho... CCDC88A 0.042 coiled-coil domain containing 88A isoform 2 CCDC88A 0.042 coiled-coil domain containing 88A isoform 1 MYH13 0.036 myosin, heavy polypeptide 13, skeletal muscle [Homo... CALCOCO2 0.036 calcium binding and coiled-coil domain 2 MYH9 0.036 myosin, heavy polypeptide 9, non-muscle SMC1B 0.036 SMC1 structural maintenance of chromosomes 1-like 2 ... HOOK3 0.030 golgi-associated microtubule-binding protein HOOK3 [... MYH10 0.030 myosin, heavy polypeptide 10, non-muscle CEP120 0.030 coiled-coil domain containing 100 MAP1A 0.030 microtubule-associated protein 1A IFT74 0.030 coiled-coil domain containing 2 isoform a IFT74 0.030 coiled-coil domain containing 2 isoform a IFT74 0.030 coiled-coil domain containing 2 isoform a TMEM81 0.030 transmembrane protein 81 MTRF1 0.024 mitochondrial translational release factor 1 TBC1D2B 0.024 TBC1 domain family, member 2B isoform a TBC1D2B 0.024 TBC1 domain family, member 2B isoform b ASB12 0.024 ankyrin repeat and SOCS box-containing protein 12 [H... CCNY 0.018 cyclin Y isoform 1 CCNY 0.018 cyclin Y isoform 2 KTN1 0.018 kinectin 1 isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.