Guide to the Human Genome
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Name: MAPKAPK3 Sequence: fasta or formatted (382aa) NCBI GI: 4758700
Description:

mitogen-activated protein kinase-activated protein kinase 3

Referenced in:

MAP Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         23           2
 C cysteine            2.4          9           1
 D aspartate           5.5         21           2
 E glutamate           7.1         27           2
 F phenylalanine       2.6         10           1
 G glycine             8.1         31           2
 H histidine           3.1         12           2
 I isoleucine          4.5         17           2
 K lysine              6.8         26           2
 L leucine             8.9         34           3
 M methionine          3.1         12           1
 N asparagine          3.7         14           2
 P proline             6.3         24           3
 Q glutamine           5.8         22           1
 R arginine            5.5         21           2
 S serine              5.0         19           3
 T threonine           5.5         21           2
 V valine              5.5         21           2
 W tryptophan          1.3          5           1
 Y tyrosine            3.4         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase-activated protein ki... 
MAPKAPK2              0.664   mitogen-activated protein kinase-activated protein k...
MAPKAPK2              0.598   mitogen-activated protein kinase-activated protein k...
MAPKAPK5              0.310   MAP kinase-activated protein kinase 5 isoform 2 [Hom...
MAPKAPK5              0.310   MAP kinase-activated protein kinase 5 isoform 1 [Hom...
CAMK1G                0.227   calcium/calmodulin-dependent protein kinase IG [Homo...
CAMK1                 0.216   calcium/calmodulin-dependent protein kinase I 
RPS6KA1               0.216   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA1               0.216   ribosomal protein S6 kinase, 90kDa, polypeptide 1 is...
RPS6KA4               0.215   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
PNCK                  0.214   pregnancy upregulated non-ubiquitously expressed Ca...
RPS6KA4               0.211   ribosomal protein S6 kinase, 90kDa, polypeptide 4 iso...
CAMK1D                0.210   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.210   calcium/calmodulin-dependent protein kinase ID isofo...
PNCK                  0.210   pregnancy upregulated non-ubiquitously expressed Ca...
CAMK4                 0.207   calcium/calmodulin-dependent protein kinase IV 
RPS6KA5               0.206   ribosomal protein S6 kinase, polypeptide 5 isoform a...
MKNK1                 0.203   MAP kinase-interacting serine/threonine kinase 1 is...
RPS6KA2               0.198   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
RPS6KA2               0.198   ribosomal protein S6 kinase, 90kDa, polypeptide 2 is...
MKNK1                 0.195   MAP kinase-interacting serine/threonine kinase 1 iso...
RPS6KA3               0.194   ribosomal protein S6 kinase, 90kDa, polypeptide 3 [Ho...
MKNK2                 0.194   MAP kinase-interacting serine/threonine kinase 2 iso...
MKNK2                 0.191   MAP kinase-interacting serine/threonine kinase 2 iso...
DCLK1                 0.189   doublecortin-like kinase 1 
CHEK2                 0.188   protein kinase CHK2 isoform c 
CHEK2                 0.188   protein kinase CHK2 isoform a 
DCLK3                 0.186   doublecortin-like kinase 3 
RPS6KA6               0.185   ribosomal protein S6 kinase polypeptide 6 
PSKH1                 0.182   protein serine kinase H1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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