Guide to the Human Genome
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Name: PNCK Sequence: fasta or formatted (426aa) NCBI GI: 209364619
Description:

pregnancy upregulated non-ubiquitously expressed CaM kinase isoform a

Referenced in:

Calmodulin and Calcium

Other entries for this name:
alt prot [360aa] pregnancy upregulated non-ubiquitously expressed CaM kinase isofo...
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         40           2
 C cysteine            1.4          6           1
 D aspartate           5.2         22           2
 E glutamate           7.3         31           1
 F phenylalanine       3.5         15           1
 G glycine             9.6         41           4
 H histidine           3.8         16           1
 I isoleucine          5.2         22           1
 K lysine              4.9         21           2
 L leucine            10.3         44           3
 M methionine          1.6          7           1
 N asparagine          1.4          6           1
 P proline             5.6         24           2
 Q glutamine           3.5         15           2
 R arginine            7.0         30           2
 S serine              8.7         37           2
 T threonine           2.3         10           1
 V valine              4.7         20           2
 W tryptophan          1.9          8           1
 Y tyrosine            2.6         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pregnancy upregulated non-ubiquitously expressed Ca... 
PNCK                  0.797   pregnancy upregulated non-ubiquitously expressed Ca...
CAMK1                 0.514   calcium/calmodulin-dependent protein kinase I 
CAMK1D                0.513   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.513   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1G                0.452   calcium/calmodulin-dependent protein kinase IG [Homo...
CAMK4                 0.300   calcium/calmodulin-dependent protein kinase IV 
CAMKV                 0.292   CaM kinase-like vesicle-associated 
PSKH1                 0.277   protein serine kinase H1 
DCLK1                 0.272   doublecortin-like kinase 1 
DCLK2                 0.261   doublecortin-like kinase 2 isoform a 
DCLK2                 0.259   doublecortin-like kinase 2 isoform b 
PSKH2                 0.259   protein serine kinase H2 
CAMK2A                0.243   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2A                0.243   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2G                0.242   calcium/calmodulin-dependent protein kinase II gamma...
DCLK3                 0.239   doublecortin-like kinase 3 
CAMK2G                0.239   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.239   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.239   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.239   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2D                0.236   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.236   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.236   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.236   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.236   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.236   calcium/calmodulin-dependent protein kinase II delta...
CAMK2B                0.233   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.233   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.233   calcium/calmodulin-dependent protein kinase II beta ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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