Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: CAMK4 Sequence: fasta or formatted (473aa) NCBI GI: 4502557
Description:

calcium/calmodulin-dependent protein kinase IV

Referenced in:

Calmodulin and Calcium

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         48           3
 C cysteine            1.7          8           1
 D aspartate           5.5         26           1
 E glutamate           8.7         41           2
 F phenylalanine       3.0         14           2
 G glycine             6.8         32           2
 H histidine           1.7          8           1
 I isoleucine          5.7         27           2
 K lysine              8.2         39           2
 L leucine             8.9         42           2
 M methionine          1.7          8           1
 N asparagine          2.1         10           1
 P proline             5.3         25           1
 Q glutamine           3.8         18           2
 R arginine            4.0         19           2
 S serine              6.6         31           3
 T threonine           4.0         19           2
 V valine              8.2         39           2
 W tryptophan          1.1          5           2
 Y tyrosine            3.0         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   calcium/calmodulin-dependent protein kinase IV 
PNCK                  0.277   pregnancy upregulated non-ubiquitously expressed Ca...
PNCK                  0.277   pregnancy upregulated non-ubiquitously expressed Ca...
CAMK1                 0.275   calcium/calmodulin-dependent protein kinase I 
CAMK1D                0.273   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.273   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1G                0.261   calcium/calmodulin-dependent protein kinase IG [Homo...
CAMK2D                0.246   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.246   calcium/calmodulin-dependent protein kinase II delt...
CAMK2D                0.245   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.245   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.245   calcium/calmodulin-dependent protein kinase II delta...
CAMK2D                0.245   calcium/calmodulin-dependent protein kinase II delta...
CAMK2G                0.239   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.239   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2A                0.238   calcium/calmodulin-dependent protein kinase II alpha...
CAMK2G                0.238   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2G                0.237   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2A                0.237   calcium/calmodulin-dependent protein kinase II alpha...
PSKH1                 0.234   protein serine kinase H1 
CAMK2G                0.233   calcium/calmodulin-dependent protein kinase II gamma...
CAMK2B                0.233   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.233   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.233   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.231   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.229   calcium/calmodulin-dependent protein kinase II beta ...
DCLK3                 0.229   doublecortin-like kinase 3 
CAMK2B                0.228   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.228   calcium/calmodulin-dependent protein kinase II beta ...
CAMK2B                0.228   calcium/calmodulin-dependent protein kinase II beta ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press