Guide to the Human Genome
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Name: PRKACB Sequence: fasta or formatted (398aa) NCBI GI: 33636738
Description:

cAMP-dependent protein kinase catalytic subunit beta isoform 1

Referenced in:

Cyclic Nucleotides

Other entries for this name:
alt prot [351aa] cAMP-dependent protein kinase catalytic subunit beta isoform 2
alt prot [257aa] cAMP-dependent protein kinase catalytic subunit beta isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.0         28           2
 C cysteine            0.8          3           1
 D aspartate           5.5         22           2
 E glutamate           7.3         29           3
 F phenylalanine       6.8         27           2
 G glycine             5.8         23           2
 H histidine           3.3         13           1
 I isoleucine          5.0         20           2
 K lysine              8.8         35           2
 L leucine             9.5         38           2
 M methionine          2.0          8           1
 N asparagine          3.8         15           2
 P proline             3.8         15           2
 Q glutamine           3.8         15           1
 R arginine            5.3         21           2
 S serine              4.8         19           2
 T threonine           5.8         23           3
 V valine              4.8         19           2
 W tryptophan          1.8          7           2
 Y tyrosine            4.5         18           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cAMP-dependent protein kinase catalytic subunit beta... 
PRKACB                0.836   cAMP-dependent protein kinase catalytic subunit beta ...
PRKACA                0.781   cAMP-dependent protein kinase catalytic subunit alpha...
PRKACA                0.778   cAMP-dependent protein kinase catalytic subunit alph...
PRKACG                0.687   protein kinase, cAMP-dependent, catalytic, gamma [Ho...
PRKACB                0.589   cAMP-dependent protein kinase catalytic subunit beta...
PRKX                  0.440   protein kinase, X-linked 
PRKG1                 0.322   protein kinase, cGMP-dependent, type I isoform 1 [H...
PRKG1                 0.322   protein kinase, cGMP-dependent, type I isoform 2 [Ho...
PRKG2                 0.319   protein kinase, cGMP-dependent, type II 
SGK1                  0.308   serum/glucocorticoid regulated kinase 1 isoform 1 [H...
SGK1                  0.308   serum/glucocorticoid regulated kinase 1 isoform 4 [...
SGK1                  0.308   serum/glucocorticoid regulated kinase 1 isoform 3 [...
SGK1                  0.308   serum/glucocorticoid regulated kinase 1 isoform 2 [...
AKT2                  0.306   AKT2 kinase 
AKT3                  0.306   AKT3 kinase isoform 2 
AKT1                  0.303   AKT1 kinase 
AKT1                  0.303   AKT1 kinase 
AKT1                  0.303   AKT1 kinase 
AKT3                  0.301   AKT3 kinase isoform 1 
SGK2                  0.301   serum/glucocorticoid regulated kinase 2 isoform alph...
SGK2                  0.301   serum/glucocorticoid regulated kinase 2 isoform beta...
PKN2                  0.289   protein kinase N2 
PRKCB                 0.282   protein kinase C, beta isoform 1 
SGK3                  0.277   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
SGK3                  0.277   serum/glucocorticoid regulated kinase 3 isoform 1 [H...
PRKCH                 0.277   protein kinase C, eta 
PRKCA                 0.276   protein kinase C, alpha 
PRKCE                 0.272   protein kinase C, epsilon 
RPS6KA4               0.270   ribosomal protein S6 kinase, 90kDa, polypeptide 4 is...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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