PRPF3 30716

Name: PRPF3	Sequence: fasta or formatted (683aa)		NCBI GI: 4758556
Description: PRP3 pre-mRNA processing factor 3 homolog		Referenced in: Capping and Splicing
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.6 52 2 C cysteine 0.4 3 1 D aspartate 4.8 33 3 E glutamate 10.0 68 3 F phenylalanine 3.1 21 2 G glycine 4.7 32 2 H histidine 2.2 15 1 I isoleucine 4.7 32 2 K lysine 11.6 79 3 L leucine 8.1 55 1 M methionine 2.3 16 2 N asparagine 3.2 22 1 P proline 6.1 42 3 Q glutamine 5.3 36 2 R arginine 6.7 46 2 S serine 5.7 39 3 T threonine 5.6 38 1 V valine 6.1 42 4 W tryptophan 0.9 6 2 Y tyrosine 0.9 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PRP3 pre-mRNA processing factor 3 homolog NHSL1 0.014 NHS-like 1 SRRM1 0.014 serine/arginine repetitive matrix 1 NEFH 0.013 neurofilament, heavy polypeptide 200kDa PLEC1 0.012 plectin 1 isoform 11 PLEC1 0.012 plectin 1 isoform 10 PLEC1 0.012 plectin 1 isoform 8 PLEC1 0.012 plectin 1 isoform 7 PLEC1 0.012 plectin 1 isoform 6 PLEC1 0.012 plectin 1 isoform 3 PLEC1 0.012 plectin 1 isoform 2 PLEC1 0.012 plectin 1 isoform 1 CNGB1 0.011 cyclic nucleotide gated channel beta 1 isoform a [H... CTR9 0.011 SH2 domain binding protein 1 BAT2D1 0.011 HBxAg transactivated protein 2 RBM26 0.009 RNA binding motif protein 26 MAP7D1 0.009 MAP7 domain containing 1 ANKHD1 0.008 ankyrin repeat and KH domain containing 1 isoform 1 ... ANKHD1-EIF4EBP3 0.008 ANKHD1-EIF4EBP3 protein ACIN1 0.008 apoptotic chromatin condensation inducer 1 LYAR 0.008 Ly1 antibody reactive homolog LYAR 0.008 Ly1 antibody reactive homolog RBM27 0.008 RNA binding motif protein 27 NBPF10 0.008 hypothetical protein LOC100132406 NCOR1 0.008 nuclear receptor co-repressor 1 DNMBP 0.008 dynamin binding protein CENPE 0.008 centromere protein E GOLGB1 0.008 golgi autoantigen, golgin subfamily b, macrogolgin ... GPRIN3 0.008 G protein-regulated inducer of neurite outgrowth 3 ... LOC100288142 0.007 PREDICTED: hypothetical protein XP_002344485 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.