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Search of human proteins with 47419934
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47419934 interferon gamma receptor 2 precursor [Homo
sapiens]
(337 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47419934 interferon gamma receptor 2 precursor [Homo sapiens] 689 0.0
gi|24430215 interleukin 10 receptor, beta precursor [Homo sapiens] 90 3e-18
gi|40255073 interleukin 20 receptor beta precursor [Homo sapiens] 67 3e-11
gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens] 57 3e-08
gi|31083156 interleukin 20 receptor, alpha [Homo sapiens] 51 2e-06
gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens] 41 0.001
gi|104487297 protein tyrosine phosphatase, receptor type, sigma ... 39 0.007
gi|104487006 protein tyrosine phosphatase, receptor type, sigma ... 39 0.007
gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens] 39 0.007
gi|4557880 interferon gamma receptor 1 precursor [Homo sapiens] 38 0.015
gi|32967311 ephrin receptor EphA2 [Homo sapiens] 33 0.47
gi|23957702 transmembrane protease, serine 6 [Homo sapiens] 32 0.81
gi|110349719 titin isoform N2-A [Homo sapiens] 32 1.1
gi|110349717 titin isoform novex-2 [Homo sapiens] 32 1.1
gi|110349713 titin isoform novex-1 [Homo sapiens] 32 1.1
gi|110349715 titin isoform N2-B [Homo sapiens] 32 1.1
gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens] 31 1.4
gi|4758282 ephrin receptor EphA7 [Homo sapiens] 30 3.1
gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens] 30 4.0
gi|155969693 myomesin family, member 3 [Homo sapiens] 30 4.0
gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo... 29 5.2
gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo ... 29 5.2
gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo s... 29 5.2
gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens] 29 5.2
gi|45359865 matrix metalloproteinase 20 preproprotein [Homo sapi... 28 8.9
>gi|47419934 interferon gamma receptor 2 precursor [Homo sapiens]
Length = 337
Score = 689 bits (1777), Expect = 0.0
Identities = 337/337 (100%), Positives = 337/337 (100%)
Query: 1 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP 60
MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP
Sbjct: 1 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP 60
Query: 61 VVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELG 120
VVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELG
Sbjct: 61 VVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELG 120
Query: 121 ALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYW 180
ALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYW
Sbjct: 121 ALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYW 180
Query: 181 EKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETMAD 240
EKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETMAD
Sbjct: 181 EKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETMAD 240
Query: 241 ASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDPTQ 300
ASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDPTQ
Sbjct: 241 ASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKDPTQ 300
Query: 301 PILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL 337
PILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL
Sbjct: 301 PILEALDKDSSPKDDVWDSVSIISFPEKEQEDVLQTL 337
>gi|24430215 interleukin 10 receptor, beta precursor [Homo sapiens]
Length = 325
Score = 89.7 bits (221), Expect = 3e-18
Identities = 85/330 (25%), Positives = 141/330 (42%), Gaps = 41/330 (12%)
Query: 5 LLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRPVVYQ 64
+ WSL LG +A L +P P++ ++ N + +L WE A +
Sbjct: 1 MAWSLGSWLGGCLLVSA-----LGMVPPPENVRMNSVNFKNILQWESPAFAKGNLT---- 51
Query: 65 VQFKYTDSKWFTADIMSIGV---NCTQITATECDFTAASPSAGFPMDFNVTLRLRAELGA 121
FTA +S + C T TECDF++ S TLR+RAE
Sbjct: 52 ----------FTAQYLSYRIFQDKCMNTTLTECDFSSLSKYGDH------TLRVRAEFAD 95
Query: 122 LHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSP-----FDIADTSTAF--FC 174
HS WV + F + +GPP ++V SL +RF +P ++ + +
Sbjct: 96 EHSDWVNIT-FCPVDDTIIGPP-GMQVEVLADSLHMRFLAPKIENEYETWTMKNVYNSWT 153
Query: 175 YYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISC 234
Y V YW+ G ++ + + + L NL+P YC+QV+ L + + G S C
Sbjct: 154 YNVQYWKNGTDEKFQITPQYDFEVLRNLEPWTTYCVQVRGFL----PDRNKAGEWSEPVC 209
Query: 235 YETMADASTELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEY 294
+T D + V +I + + ++ + CF L+ KY F S+P ++E+
Sbjct: 210 EQTTHDETVPSWMVAVILMASVFMVCLALLGCFALLWCVYKKTKYAFSPRNSLPQHLKEF 269
Query: 295 LKDPTQPILEALDKDSSPKDDVWDSVSIIS 324
L P L S ++DV+D +S+I+
Sbjct: 270 LGHPHHNTLLFFSFPLSDENDVFDKLSVIA 299
>gi|40255073 interleukin 20 receptor beta precursor [Homo sapiens]
Length = 311
Score = 66.6 bits (161), Expect = 3e-11
Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 24/240 (10%)
Query: 6 LWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRPVVYQV 65
+W+ L + +A D ++ LPAPQ+ + N + +L W PV T V Y V
Sbjct: 11 IWTSLFMWFFYALIPCLLTDEVAILPAPQNLSVLSTNMKHLLMWSPVIAPGET--VYYSV 68
Query: 66 QFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSA 125
+++ +T+ I C+ ECD T +A P + LR+RA LG+ SA
Sbjct: 69 EYQGEYESLYTSHIWIPSSWCSLTEGPECDVT-DDITATVPYN----LRVRATLGSQTSA 123
Query: 126 WVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYW--EKG 183
W + RN T+ +E+T L+I ++ D F + V YW E G
Sbjct: 124 WSILK-HPFNRNSTILTRPGMEITKDGFHLVI------ELEDLGPQFE-FLVAYWRREPG 175
Query: 184 GIQQVKGPFRSNSI--SLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETMADA 241
+ VK RS I L+ ++P YC++ Q + I R S C E +A
Sbjct: 176 AEEHVK-MVRSGGIPVHLETMEPGAAYCVKAQTFV----KAIGRYSAFSQTECVEVQGEA 230
>gi|46488932 interferon-alpha receptor 1 precursor [Homo sapiens]
Length = 557
Score = 56.6 bits (135), Expect = 3e-08
Identities = 71/329 (21%), Positives = 136/329 (41%), Gaps = 31/329 (9%)
Query: 13 LGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRPVVYQVQFKYTDS 72
+GV++ ++LP P++ ++ + N VL W+ +N T +QVQ+ +
Sbjct: 212 IGVYSPVHCIKTTVENELPPPENIEVSVQNQNYVLKWD-YTYANMT----FQVQWLHAFL 266
Query: 73 KWFTADIMSIGV---NCTQITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTM 129
K + + +C + T+C F G + LR++A G S W
Sbjct: 267 KRNPGNHLYKWKQIPDCENVKTTQCVFPQNVFQKGIYL-----LRVQASDGNNTSFWSEE 321
Query: 130 PWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAF---FCYYVHYWEKGGIQ 186
F + PP + S I +P +T Y + +WE
Sbjct: 322 IKFDTEIQAFLLPPV-FNIRSLSDSFHIYIGAPKQSGNTPVIQDYPLIYEIIFWENTSNA 380
Query: 187 QVKGPFRSNSISLDNLKPSRVYCLQVQAQLL---WNKSNIFRVGHLSNISCYETMADAST 243
+ K + +++ NLKP VYC++ +A + NKS++F S+ C +T ++
Sbjct: 381 ERKIIEKKTDVTVPNLKPLTVYCVKARAHTMDEKLNKSSVF-----SDAVCEKTKPGNTS 435
Query: 244 ELQQVILISVGTFSLLSVLAGACFFLVLKYRGLIKYWFHTPPSIPLQIEEYLKD-PTQPI 302
++ ++ I + F+L V+ A FL I Y F I+EY + P + +
Sbjct: 436 KIWLIVGICIALFALPFVIYAAKVFL-----RCINYVFFPSLKPSSSIDEYFSEQPLKNL 490
Query: 303 LEALDKDSSPKDDVWDSVSIISFPEKEQE 331
L + ++ K + +++S I+ E+ +
Sbjct: 491 LLSTSEEQIEKCFIIENISTIATVEETNQ 519
Score = 52.0 bits (123), Expect = 8e-07
Identities = 63/260 (24%), Positives = 110/260 (42%), Gaps = 28/260 (10%)
Query: 1 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP 60
M LL + L+L A + L +PQ ++ + + +L W N +
Sbjct: 1 MMVVLLGATTLVLVAVAPWVLSAAAGGKNLKSPQKVEVDIIDDNFILRW------NRSDE 54
Query: 61 VVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELG 120
V V F + K + + + C IT+T+C+F+ S + + LR+RAE
Sbjct: 55 SVGNVTFSFDYQKTGMDNWIKLS-GCQNITSTKCNFS----SLKLNVYEEIKLRIRAEKE 109
Query: 121 ALHSAWVTMPWFQHYRNVTVGPPE-NIEVTPGEGSLIIRFSSPFDIADTSTAF----FCY 175
S+W + F +R +GPPE ++E E I+ SP A F Y
Sbjct: 110 NT-SSWYEVDSFTPFRKAQIGPPEVHLE---AEDKAIVIHISPGTKDSVMWALDGLSFTY 165
Query: 176 YVHYWE--KGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNIS 233
+ W+ G ++++ + + I L P YCL+V+A LL + +++G S +
Sbjct: 166 SLVIWKNSSGVEERIENIYSRHKIY--KLSPETTYCLKVKAALLTS----WKIGVYSPVH 219
Query: 234 CYETMADASTELQQVILISV 253
C +T + + I +SV
Sbjct: 220 CIKTTVENELPPPENIEVSV 239
>gi|31083156 interleukin 20 receptor, alpha [Homo sapiens]
Length = 553
Score = 50.8 bits (120), Expect = 2e-06
Identities = 63/261 (24%), Positives = 101/261 (38%), Gaps = 28/261 (10%)
Query: 1 MRPTLLWSLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRP 60
+RP L LLLLL + A A P LP P + N + VL W P +
Sbjct: 9 LRPLPLPPLLLLL-LAAPWGRAVPCVSGGLPKPANITFLSINMKNVLQWTPPEGLQGVK- 66
Query: 61 VVYQVQ-FKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAEL 119
V Y VQ F Y KW C I T CD +A + + +++A
Sbjct: 67 VTYTVQYFIYGQKKWLNKS------ECRNINRTYCDLSAETSD----YEHQYYAKVKAIW 116
Query: 120 GALHSAWVTMPWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSP----FDIADTSTAFFCY 175
G S W F + +GPPE + +T E S+ + ++P + D +
Sbjct: 117 GTKCSKWAESGRFYPFLETQIGPPE-VALTTDEKSISVVLTAPEKWKRNPEDLPVSMQQI 175
Query: 176 YVHYWEKGGIQQVKGP------FRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHL 229
Y + + K ++++ L L+P+ +YC+ V++ + R
Sbjct: 176 YSNLKYNVSVLNTKSNRTWSQCVTNHTLVLTWLEPNTLYCVHVESFV----PGPPRRAQP 231
Query: 230 SNISCYETMADASTELQQVIL 250
S C T+ D S+E + I+
Sbjct: 232 SEKQCARTLKDQSSEFKAKII 252
>gi|31317239 interleukin 22 receptor, alpha 1 [Homo sapiens]
Length = 574
Score = 41.2 bits (95), Expect = 0.001
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 12/91 (13%)
Query: 8 SLLLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRPVVYQVQF 67
+LL +L V + AA AP DP L QH K + N E +L+W+ + T VY +++
Sbjct: 3 TLLTILTVGSLAAHAPEDPSDLL---QHVKFQSSNFENILTWD--SGPEGTPDTVYSIEY 57
Query: 68 K-YTDSKWFTADIMSIGVNCTQITATECDFT 97
K Y + W C +IT C+ T
Sbjct: 58 KTYGERDWVAKK------GCQRITRKSCNLT 82
>gi|104487297 protein tyrosine phosphatase, receptor type, sigma
isoform 2 precursor [Homo sapiens]
Length = 1910
Score = 38.9 bits (89), Expect = 0.007
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 25/176 (14%)
Query: 49 WEPVALSNSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMD 108
WEP A + + + Y++QF DS + +E +TA+ G
Sbjct: 830 WEPPAGTAEDQVLGYRLQFGREDSTPLAT---------LEFPPSEDRYTASGVHKGATYV 880
Query: 109 FNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVT--PGEGSLIIRFSSPFDIA 166
F + R R LG + +++P + G P+ +E G++++R+ P A
Sbjct: 881 FRLAARSRGGLGEEAAEVLSIP-----EDTPRGHPQILEAAGNASAGTVLLRWLPPVP-A 934
Query: 167 DTSTAFFCYYVHYWEKGGIQQVKG--------PFRSNSISLDNLKPSRVYCLQVQA 214
+ + A Y V E G + + P N+++L LKP Y LQV+A
Sbjct: 935 ERNGAIVKYTVAVREAGALGPARETELPAAAEPGAENALTLQGLKPDTAYDLQVRA 990
>gi|104487006 protein tyrosine phosphatase, receptor type, sigma
isoform 1 precursor [Homo sapiens]
Length = 1948
Score = 38.9 bits (89), Expect = 0.007
Identities = 42/176 (23%), Positives = 72/176 (40%), Gaps = 25/176 (14%)
Query: 49 WEPVALSNSTRPVVYQVQFKYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMD 108
WEP A + + + Y++QF DS + +E +TA+ G
Sbjct: 852 WEPPAGTAEDQVLGYRLQFGREDSTPLAT---------LEFPPSEDRYTASGVHKGATYV 902
Query: 109 FNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVT--PGEGSLIIRFSSPFDIA 166
F + R R LG + +++P + G P+ +E G++++R+ P A
Sbjct: 903 FRLAARSRGGLGEEAAEVLSIP-----EDTPRGHPQILEAAGNASAGTVLLRWLPPVP-A 956
Query: 167 DTSTAFFCYYVHYWEKGGIQQVKG--------PFRSNSISLDNLKPSRVYCLQVQA 214
+ + A Y V E G + + P N+++L LKP Y LQV+A
Sbjct: 957 ERNGAIVKYTVAVREAGALGPARETELPAAAEPGAENALTLQGLKPDTAYDLQVRA 1012
>gi|31317241 interleukin 22-binding protein isoform 2 [Homo sapiens]
Length = 231
Score = 38.9 bits (89), Expect = 0.007
Identities = 34/132 (25%), Positives = 56/132 (42%), Gaps = 15/132 (11%)
Query: 33 PQHPKIRLYNAEQVLSWEPV-ALSNSTRPVVYQVQFK-YTDSKWFTADIMSIGVNCTQIT 90
PQ + + N +L W+P AL+ ++ VY VQ+K Y +W + +C
Sbjct: 31 PQRVQFQSRNFHNILQWQPGRALTGNSS--VYFVQYKIYGQRQWKNKE------DCWGTQ 82
Query: 91 ATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTMPWFQHYRNVTVGPPENIEVTP 150
CD T+ + P R+RA +S W P F + + PP + +T
Sbjct: 83 ELSCDLTSETSDIQEPYYG----RVRAASAGSYSEWSMTPRFTPWWETKIDPPV-MNITQ 137
Query: 151 GEGSLIIRFSSP 162
GSL++ +P
Sbjct: 138 VNGSLLVILHAP 149
>gi|4557880 interferon gamma receptor 1 precursor [Homo sapiens]
Length = 489
Score = 37.7 bits (86), Expect = 0.015
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 13/153 (8%)
Query: 10 LLLLGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNSTRPVVYQVQFKY 69
L++ GV A S +P P + I YN ++ WE + V +
Sbjct: 9 LVMQGVSRAEMGTADLGPSSVPTPTNVTIESYNMNPIVYWEYQIMPQVPVFTVEVKNYGV 68
Query: 70 TDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTM 129
+S+W A C I+ C+ S G P + ++ +R++A +G SA+
Sbjct: 69 KNSEWIDA--------CINISHHYCNI---SDHVGDPSN-SLWVRVKARVGQKESAYAKS 116
Query: 130 PWFQHYRNVTVGPPENIEVTPGEGSLIIRFSSP 162
F R+ +GPP+ +++ E ++I P
Sbjct: 117 EEFAVCRDGKIGPPK-LDIRKEEKQIMIDIFHP 148
>gi|32967311 ephrin receptor EphA2 [Homo sapiens]
Length = 976
Score = 32.7 bits (73), Expect = 0.47
Identities = 63/269 (23%), Positives = 107/269 (39%), Gaps = 47/269 (17%)
Query: 22 APPDPLSQLPAPQHPKIRLY------NAEQVLSWEPVALSNSTRPVVYQVQFKYTDSKWF 75
AP DP S +P + P Y A+ L W P S +VY V + +
Sbjct: 316 APQDPAS-MPCTRPPSAPHYLTAVGMGAKVELRWTPPQDSGGREDIVYSVTCEQCWPESG 374
Query: 76 TADIMSIGVNCTQ----ITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTMPW 131
V ++ +T T + P M++ T+ R + L ++
Sbjct: 375 ECGPCEASVRYSEPPHGLTRTSVTVSDLEPH----MNYTFTVEARNGVSGLVTS------ 424
Query: 132 FQHYRNVTVG-----PPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYWEKG--- 183
+ +R +V PP+ SL + +S P + + Y V Y +KG
Sbjct: 425 -RSFRTASVSINQTEPPKVRLEGRSTTSLSVSWSIP---PPQQSRVWKYEVTYRKKGDSN 480
Query: 184 --GIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETMA-D 240
+++ +G S++LD+L P Y +QVQA + G S + ++T++ +
Sbjct: 481 SYNVRRTEG----FSVTLDDLAPDTTYLVQVQALTQEGQ------GAGSKVHEFQTLSPE 530
Query: 241 ASTELQQVILISVGTFSLLSVLAGACFFL 269
S L + ++VG LL VLAG FF+
Sbjct: 531 GSGNLAVIGGVAVGVV-LLLVLAGVGFFI 558
>gi|23957702 transmembrane protease, serine 6 [Homo sapiens]
Length = 811
Score = 32.0 bits (71), Expect = 0.81
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 137 NVTVGPPENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYWEKGGIQQVKGPFRSNS 196
N + P E L+I +S DIA ++ CY Y +G + ++KGP S
Sbjct: 184 NSSAAVPYRAEYEVDPEGLVILEASVKDIAALNSTLGCYRYSYVGQGQVLRLKGPDHLAS 243
Query: 197 ISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYETMADASTELQQVILISVGTF 256
L +L+ + L ++ +L W L+ M D + L++ ++ SV
Sbjct: 244 SCLWHLQGPK--DLMLKLRLEWT---------LAECRDRLAMYDVAGPLEKRLITSVYGC 292
Query: 257 S----LLSVLAGACFFLVLKYRGLIKYW 280
S ++ VLA V+ +GL Y+
Sbjct: 293 SRQEPVVEVLASGAIMAVVWKKGLHSYY 320
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 16/105 (15%)
Query: 17 AAAAAAPPDP------LSQLPAPQHPKIRLYNAEQV-LSWEPVALSNSTRPVVYQVQFKY 69
+A ++P DP +S + P P E + L W P ++ V Y ++ +
Sbjct: 27836 SAGLSSPSDPSKFTLAVSPVDPPGTPDYIDVTRETITLKWNPPLRDGGSKIVGYSIEKRQ 27895
Query: 70 TDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLR 114
+ +W V C +EC +T S G +F + R
Sbjct: 27896 GNERW---------VRCNFTDVSECQYTVTGLSPGDRYEFRIIAR 27931
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 16/105 (15%)
Query: 17 AAAAAAPPDP------LSQLPAPQHPKIRLYNAEQV-LSWEPVALSNSTRPVVYQVQFKY 69
+A ++P DP +S + P P E + L W P ++ V Y ++ +
Sbjct: 21531 SAGLSSPSDPSKFTLAVSPVDPPGTPDYIDVTRETITLKWNPPLRDGGSKIVGYSIEKRQ 21590
Query: 70 TDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLR 114
+ +W V C +EC +T S G +F + R
Sbjct: 21591 GNERW---------VRCNFTDVSECQYTVTGLSPGDRYEFRIIAR 21626
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 16/105 (15%)
Query: 17 AAAAAAPPDP------LSQLPAPQHPKIRLYNAEQV-LSWEPVALSNSTRPVVYQVQFKY 69
+A ++P DP +S + P P E + L W P ++ V Y ++ +
Sbjct: 21464 SAGLSSPSDPSKFTLAVSPVDPPGTPDYIDVTRETITLKWNPPLRDGGSKIVGYSIEKRQ 21523
Query: 70 TDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLR 114
+ +W V C +EC +T S G +F + R
Sbjct: 21524 GNERW---------VRCNFTDVSECQYTVTGLSPGDRYEFRIIAR 21559
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 31.6 bits (70), Expect = 1.1
Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 16/105 (15%)
Query: 17 AAAAAAPPDP------LSQLPAPQHPKIRLYNAEQV-LSWEPVALSNSTRPVVYQVQFKY 69
+A ++P DP +S + P P E + L W P ++ V Y ++ +
Sbjct: 21339 SAGLSSPSDPSKFTLAVSPVDPPGTPDYIDVTRETITLKWNPPLRDGGSKIVGYSIEKRQ 21398
Query: 70 TDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLR 114
+ +W V C +EC +T S G +F + R
Sbjct: 21399 GNERW---------VRCNFTDVSECQYTVTGLSPGDRYEFRIIAR 21434
>gi|17975768 ephrin receptor EphB3 precursor [Homo sapiens]
Length = 998
Score = 31.2 bits (69), Expect = 1.4
Identities = 24/94 (25%), Positives = 44/94 (46%), Gaps = 11/94 (11%)
Query: 175 YYVHYWEKGGIQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISC 234
Y + Y+EK + NS+ LD L+P Y +QV+A+ + G S +
Sbjct: 486 YEMKYFEKSEGIASTVTSQMNSVQLDGLRPDARYVVQVRAR------TVAGYGQYSRPAE 539
Query: 235 YETMADASTELQQV-----ILISVGTFSLLSVLA 263
+ET ++ + QQ+ +++ T L+ V+A
Sbjct: 540 FETTSERGSGAQQLQEQLPLIVGSATAGLVFVVA 573
>gi|4758282 ephrin receptor EphA7 [Homo sapiens]
Length = 998
Score = 30.0 bits (66), Expect = 3.1
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 2/42 (4%)
Query: 175 YYVHYWEKGGIQQVKGPFR--SNSISLDNLKPSRVYCLQVQA 214
Y + Y+EK ++ + S S S++NLKP VY Q++A
Sbjct: 476 YEIKYYEKDQRERTYSTVKTKSTSASINNLKPGTVYVFQIRA 517
>gi|188528648 tenascin XB isoform 1 precursor [Homo sapiens]
Length = 4242
Score = 29.6 bits (65), Expect = 4.0
Identities = 56/246 (22%), Positives = 96/246 (39%), Gaps = 32/246 (13%)
Query: 13 LGVFAAAAAAPPDPLSQLPAPQHPKIRLYNAEQVLSWEPVALSNS-----TRPVVYQVQF 67
+GV AA P + AP+ P+ L V P +LS S R + VQ+
Sbjct: 2386 IGVTAAEEETPSPTEPSMEAPEPPEEPLLGELTVTGSSPDSLSLSWTVPQGRFDSFTVQY 2445
Query: 68 KYTDSKWFTADIMSIGVNCTQITATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWV 127
K D + ++ +G +++T P + M L +G + + V
Sbjct: 2446 KDRDGR---PQVVRVGGEESEVTV-----GGLEPGRKYKMHL-YGLHEGRRVGPVSTVGV 2496
Query: 128 TMPWFQHYRNVTVGPPENIEVTPGE------GSLIIRFSSPFDIADTSTA----FFCYYV 177
T P Q + T P E PG G L + SSP ++ + T F + V
Sbjct: 2497 TAP--QEDVDETPSPTEPGTEAPGPPEEPLLGELTVTGSSPDSLSLSWTVPQGRFDSFTV 2554
Query: 178 HYWEKGG-IQQVKGPFRSNSISLDNLKPSRVYCLQVQAQLLWNKSNIFRVGHLSNISCYE 236
Y ++ G Q V+ + + +++ L+P R Y + L+ R+G +S + E
Sbjct: 2555 QYKDRDGRPQAVRVGGQESKVTVRGLEPGRKYKMH-----LYGLHEGRRLGPVSAVGVTE 2609
Query: 237 TMADAS 242
A+ +
Sbjct: 2610 DEAETT 2615
>gi|155969693 myomesin family, member 3 [Homo sapiens]
Length = 1437
Score = 29.6 bits (65), Expect = 4.0
Identities = 20/78 (25%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 141 GPPENIEVTPGEG-SLIIRFSSPFDIADTSTAFFCYYVHYWEKGGIQQ---VKGPFRSNS 196
GPP ++ + SL++++ P + Y+V + E+G Q GP
Sbjct: 803 GPPYDVRASEVRATSLVLQWEPPLYMGAGPVTG--YHVSFQEEGSEQWKPVTPGPISGTH 860
Query: 197 ISLDNLKPSRVYCLQVQA 214
+ + +L+P + Y QVQA
Sbjct: 861 LRVSDLQPGKSYVFQVQA 878
>gi|221316760 L1 cell adhesion molecule isoform 3 precursor [Homo
sapiens]
Length = 1248
Score = 29.3 bits (64), Expect = 5.2
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 144 ENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYWEKGGIQQ----------VKGPFR 193
E IE+ S ++ P D+A Y V YW +G ++ V P
Sbjct: 814 EGIEIL--NSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPAN 871
Query: 194 SNSISLDNLKPSRVYCLQVQA 214
+ S+ L L+P Y L+VQA
Sbjct: 872 TTSVILSGLRPYSSYHLEVQA 892
>gi|13435353 L1 cell adhesion molecule isoform 2 precursor [Homo
sapiens]
Length = 1253
Score = 29.3 bits (64), Expect = 5.2
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 144 ENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYWEKGGIQQ----------VKGPFR 193
E IE+ S ++ P D+A Y V YW +G ++ V P
Sbjct: 819 EGIEIL--NSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPAN 876
Query: 194 SNSISLDNLKPSRVYCLQVQA 214
+ S+ L L+P Y L+VQA
Sbjct: 877 TTSVILSGLRPYSSYHLEVQA 897
>gi|4557707 L1 cell adhesion molecule isoform 1 precursor [Homo
sapiens]
Length = 1257
Score = 29.3 bits (64), Expect = 5.2
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 12/81 (14%)
Query: 144 ENIEVTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYWEKGGIQQ----------VKGPFR 193
E IE+ S ++ P D+A Y V YW +G ++ V P
Sbjct: 819 EGIEIL--NSSAVLVKWRPVDLAQVKGHLRGYNVTYWREGSQRKHSKRHIHKDHVVVPAN 876
Query: 194 SNSISLDNLKPSRVYCLQVQA 214
+ S+ L L+P Y L+VQA
Sbjct: 877 TTSVILSGLRPYSSYHLEVQA 897
>gi|31317243 interleukin 22-binding protein isoform 3 [Homo sapiens]
Length = 130
Score = 29.3 bits (64), Expect = 5.2
Identities = 27/103 (26%), Positives = 40/103 (38%), Gaps = 16/103 (15%)
Query: 33 PQHPKIRLYNAEQVLSWEP--VALSNSTRPVVYQVQFK-YTDSKWFTADIMSIGVNCTQI 89
PQ + + N +L W+P NS+ VY VQ+K Y +W + +C
Sbjct: 31 PQRVQFQSRNFHNILQWQPGRALTGNSS---VYFVQYKIYGQRQWKNKE------DCWGT 81
Query: 90 TATECDFTAASPSAGFPMDFNVTLRLRAELGALHSAWVTMPWF 132
CD T+ + P R+RA +S W P F
Sbjct: 82 QELSCDLTSETSDIQEP----YYGRVRAASAGSYSEWSMTPRF 120
>gi|45359865 matrix metalloproteinase 20 preproprotein [Homo
sapiens]
Length = 483
Score = 28.5 bits (62), Expect = 8.9
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 148 VTPGEGSLIIRFSSPFDIADTSTAFFCYYVHYWEKGGIQQVKGPFRS 194
+T L+ + +++A+ TA+F HYW G Q++GP R+
Sbjct: 336 ITSSFPQLMSNVDAAYEVAERGTAYFFKGPHYWITRGF-QMQGPPRT 381
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,866,993
Number of Sequences: 37866
Number of extensions: 620123
Number of successful extensions: 1816
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1778
Number of HSP's gapped (non-prelim): 46
length of query: 337
length of database: 18,247,518
effective HSP length: 103
effective length of query: 234
effective length of database: 14,347,320
effective search space: 3357272880
effective search space used: 3357272880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.