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Search of human proteins with 46852392
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46852392 chromobox homolog 6 [Homo sapiens]
(412 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46852392 chromobox homolog 6 [Homo sapiens] 827 0.0
gi|10190682 chromobox homolog 8 [Homo sapiens] 182 5e-46
gi|55770830 chromobox homolog 4 [Homo sapiens] 126 3e-29
gi|28372505 chromobox homolog 7 [Homo sapiens] 120 2e-27
gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens] 114 1e-25
gi|14249190 chromobox homolog 2 isoform 2 [Homo sapiens] 106 3e-23
gi|188035910 heterochromatin protein 1-alpha [Homo sapiens] 59 6e-09
gi|188035908 heterochromatin protein 1-alpha [Homo sapiens] 59 6e-09
gi|6912292 heterochromatin protein 1-alpha [Homo sapiens] 59 6e-09
gi|5803076 heterochromatin protein 1-beta [Homo sapiens] 59 6e-09
gi|187960037 heterochromatin protein 1-beta [Homo sapiens] 59 6e-09
gi|154146199 sal-like 3 [Homo sapiens] 59 8e-09
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 58 1e-08
gi|222418649 mucin 7, secreted precursor [Homo sapiens] 58 1e-08
gi|222418645 mucin 7, secreted precursor [Homo sapiens] 58 1e-08
gi|15082258 chromobox homolog 3 [Homo sapiens] 56 5e-08
gi|20544151 chromobox homolog 3 [Homo sapiens] 56 5e-08
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 54 2e-07
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 54 2e-07
gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 54 3e-07
gi|56118221 amyloid beta (A4) precursor protein-binding, family ... 52 1e-06
gi|33286436 gametogenetin [Homo sapiens] 51 2e-06
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 51 2e-06
gi|153792074 proline rich 12 [Homo sapiens] 51 2e-06
gi|189181724 proteoglycan 4 isoform D [Homo sapiens] 50 3e-06
>gi|46852392 chromobox homolog 6 [Homo sapiens]
Length = 412
Score = 827 bits (2136), Expect = 0.0
Identities = 412/412 (100%), Positives = 412/412 (100%)
Query: 1 MELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQK 60
MELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQK
Sbjct: 1 MELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQK 60
Query: 61 ERERELYGPKKRGPKPKTFLLKARAQAEALRISDVHFSVKPSASASSPKLHSSAAVHRLK 120
ERERELYGPKKRGPKPKTFLLKARAQAEALRISDVHFSVKPSASASSPKLHSSAAVHRLK
Sbjct: 61 ERERELYGPKKRGPKPKTFLLKARAQAEALRISDVHFSVKPSASASSPKLHSSAAVHRLK 120
Query: 121 KDIRRCHRMSRRPLPRPDPQGGSPGLRPPISPFSETVRIINRKVKPREPKRNRIILNLKV 180
KDIRRCHRMSRRPLPRPDPQGGSPGLRPPISPFSETVRIINRKVKPREPKRNRIILNLKV
Sbjct: 121 KDIRRCHRMSRRPLPRPDPQGGSPGLRPPISPFSETVRIINRKVKPREPKRNRIILNLKV 180
Query: 181 IDKGAGGGGAGQGAGALARPKVPSRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKPPPA 240
IDKGAGGGGAGQGAGALARPKVPSRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKPPPA
Sbjct: 181 IDKGAGGGGAGQGAGALARPKVPSRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKPPPA 240
Query: 241 PLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETV 300
PLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETV
Sbjct: 241 PLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETV 300
Query: 301 SPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEPEAGDWRP 360
SPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEPEAGDWRP
Sbjct: 301 SPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEPEAGDWRP 360
Query: 361 EMSPCSNVVVTDVTSNLLTVTIKEFCNPEDFEKVAAGVAGAAGGGGSIGASK 412
EMSPCSNVVVTDVTSNLLTVTIKEFCNPEDFEKVAAGVAGAAGGGGSIGASK
Sbjct: 361 EMSPCSNVVVTDVTSNLLTVTIKEFCNPEDFEKVAAGVAGAAGGGGSIGASK 412
>gi|10190682 chromobox homolog 8 [Homo sapiens]
Length = 389
Score = 182 bits (462), Expect = 5e-46
Identities = 153/419 (36%), Positives = 200/419 (47%), Gaps = 59/419 (14%)
Query: 1 MELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQK 60
MELSAVGERVFAAE+++KRRIRKGR+EYLVKWKGW+ KYSTWEPEENILD+RL+AAFE++
Sbjct: 1 MELSAVGERVFAAEALLKRRIRKGRMEYLVKWKGWSQKYSTWEPEENILDARLLAAFEER 60
Query: 61 ERERELYGPKKRGPKPKTFLLKARAQAEALRI---SDVHFSVKPSASASSPKLHSSAAVH 117
ERE ELYGPKKRGPKPKTFLLKA+A+A+A SD ++ SP+ A+
Sbjct: 61 EREMELYGPKKRGPKPKTFLLKAQAKAKAKTYEFRSDSARGIRIPYPGRSPQ--DLASTS 118
Query: 118 RLKKDIRRCHRMSRRPLPRPDPQGGSPGLRPPISPFSETVRIINRKVKPREPKRNRIILN 177
R ++ +R + GL PP S S + R PR+ R+R
Sbjct: 119 RAREGLR------------------NMGLSPPAS--STSTSSTCRAEAPRDRDRDRD--- 155
Query: 178 LKVIDKGAGGGGAGQGAGALARPKVPSRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKP 237
+ ++ + R + +RV K +S + + K L P
Sbjct: 156 -RDRERDRERERERERERERERERERGTSRVDDKPSSPGDSSKKRGPKPRK----ELPDP 210
Query: 238 PPAPLVAPSPG--------KAEASAPGPGLLLAAPAAPYDARSSGSS--GCPSPTPQSSD 287
PL PS G K + + G G A + AR S C +P S++
Sbjct: 211 SQRPLGEPSAGLGEYLKGRKLDDTPSGAGKFPAGHSVIQLARRQDSDLVQCGVTSPSSAE 270
Query: 288 P------DDTPPKLLP------ETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAA 335
D P +++ E A V S PP S R ++ A
Sbjct: 271 ATGKLAVDTFPARVIKHRAAFLEAKGQGALDPNGTRVRHGSGPPSSGGGLYR---DMGAQ 327
Query: 336 AGPAPPTAPEP-AGASSEPEAGDWRPEMSPCSNVVVTDVTSNLLTVTIKEFCNPEDFEK 393
G A P A +PE W P ++ VVVTDVTSN LTVTIKE + F K
Sbjct: 328 GGRPSLIARIPVARILGDPEEESWSPSLTNLEKVVVTDVTSNFLTVTIKESNTDQGFFK 386
>gi|55770830 chromobox homolog 4 [Homo sapiens]
Length = 560
Score = 126 bits (317), Expect = 3e-29
Identities = 70/150 (46%), Positives = 98/150 (65%), Gaps = 10/150 (6%)
Query: 1 MELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQK 60
MEL AVGE VFA ESI K+RIRKGR+EYLVKW+GW+ KY+TWEPEENILD RL+ AF+ +
Sbjct: 1 MELPAVGEHVFAVESIEKKRIRKGRVEYLVKWRGWSPKYNTWEPEENILDPRLLIAFQNR 60
Query: 61 ERERELYGPKKRGPKPKTFLLKARAQAEALRISDVHFSVKPSASASSPKLHSSA----AV 116
ER+ +L G +KRGPKPK +++ A R S+V ++ S++ + KL A
Sbjct: 61 ERQEQLMGYRKRGPKPKPLVVQVPTFA---RRSNVLTGLQDSSTDNRAKLDLGAQGKGQG 117
Query: 117 HRLKKDIRRCHRM---SRRPLPRPDPQGGS 143
H+ + + ++ H+ S+ +P P G S
Sbjct: 118 HQYELNSKKHHQYQPHSKERAGKPPPPGKS 147
Score = 51.6 bits (122), Expect = 1e-06
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 18/131 (13%)
Query: 270 ARSSGSSGCPSPTPQSSDPDDTPPKLL---PETVSPSAPSWREPEVLDLSL--------- 317
ARS + C +P + P D PP PE + + E +DL
Sbjct: 430 ARSISTPTCLGGSPAAERPADLPPAAALPQPEVILLDSDL---DEPIDLRCVKTRSEAGE 486
Query: 318 PPESAATSKRAPPE--VTAAAGPAPPTAPEPAGASSEPEAGDWRPEMSPC-SNVVVTDVT 374
PP S P V AA AP T E A ++ E + E P N+++TDVT
Sbjct: 487 PPSSLQVKPETPASAAVAVAAAAAPTTTAEKPPAEAQDEPAESLSEFKPFFGNIIITDVT 546
Query: 375 SNLLTVTIKEF 385
+N LTVT KE+
Sbjct: 547 ANCLTVTFKEY 557
>gi|28372505 chromobox homolog 7 [Homo sapiens]
Length = 251
Score = 120 bits (302), Expect = 2e-27
Identities = 55/82 (67%), Positives = 67/82 (81%)
Query: 1 MELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQK 60
MELSA+GE+VFA ESI K+R+RKG++EYLVKWKGW KYSTWEPEE+ILD RL+ A+E+K
Sbjct: 1 MELSAIGEQVFAVESIRKKRVRKGKVEYLVKWKGWPPKYSTWEPEEHILDPRLVMAYEEK 60
Query: 61 ERERELYGPKKRGPKPKTFLLK 82
E G +KRGPKPK LL+
Sbjct: 61 EERDRASGYRKRGPKPKRLLLQ 82
Score = 40.8 bits (94), Expect = 0.002
Identities = 27/71 (38%), Positives = 35/71 (49%), Gaps = 4/71 (5%)
Query: 330 PEVTAAAGPAPPTAPEP---AGASSEPEAGDWRPEMSPCSNVVVTDVTSNLLTVTIKEFC 386
P+V AAG P A P A A W P + P S V VTD+T+N +TVT +E
Sbjct: 180 PDVLQAAGEWEPAAQPPEEEADADLAEGPPPWTPAL-PSSEVTVTDITANSITVTFREAQ 238
Query: 387 NPEDFEKVAAG 397
E F + +G
Sbjct: 239 AAEGFFRDRSG 249
>gi|61743963 chromobox homolog 2 isoform 1 [Homo sapiens]
Length = 532
Score = 114 bits (286), Expect = 1e-25
Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 17/194 (8%)
Query: 2 ELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKE 61
ELS+VGE+VFAAE I+ +R+RKG++EYLVKW+GW+ K+++WEPEENILD RL+ AF++KE
Sbjct: 3 ELSSVGEQVFAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQKKE 62
Query: 62 RERELYGPKKRGPKPKTFLLKARAQAEALRIS-----DVHFSVKPSASASSPKLHSSAAV 116
E+E+ +KRG +P+ K A + R S D K S+S+SS SS++
Sbjct: 63 HEKEVQN-RKRGKRPRGRPRKLTAMSSCSRRSKLKEPDAPSKSKSSSSSSSSTSSSSSSD 121
Query: 117 HRLKKDI---RRCHRMSRRPLPRPDPQ--GGSPGLRPPISPFSETVRIINRKVKPREPKR 171
D+ R P+P+ Q P L+ PI + RK P E K
Sbjct: 122 EEDDSDLDAKRGPRGRETHPVPQKKAQILVAKPELKDPIR------KKRGRKPLPPEQKA 175
Query: 172 NRIILNLKVIDKGA 185
R ++L + K A
Sbjct: 176 TRRPVSLAKVLKTA 189
Score = 57.4 bits (137), Expect = 2e-08
Identities = 79/291 (27%), Positives = 106/291 (36%), Gaps = 64/291 (21%)
Query: 143 SPGLRPPISPFSETVRIINRKVKPREPKRNRIILNLKVIDKGAGG---------GGAGQG 193
SPG R IS S V +NR + + +R+ L + +K G G G
Sbjct: 244 SPG-RGGISWQSSIVHYMNRMTQSQAQAASRLALKAQATNKCGLGLDLKVRTQKGELGMS 302
Query: 194 AGALARPKVPSRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKPPPAPLVAPSPG----- 248
PK PS V + V T GA + P P AP+
Sbjct: 303 PPGSKIPKAPSGGAV-------EQKVGNTGGPPHTHGASRVPAGCPGPQPAPTQELSLQV 355
Query: 249 ----KAEASAPGPGLLL----------AAPAAPYDARSSG---SSGCPSPTPQSSDPDDT 291
+ PG GLL A AP SG +SG PT S
Sbjct: 356 LDLQSVKNGMPGVGLLARHATATKGVPATNPAPGKGTGSGLIGASGATMPTDTSKSE--- 412
Query: 292 PPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAG-PAPPTAPEPAGAS 350
KL V+P P+ + V + P S S+ AP E AA P E + +
Sbjct: 413 --KLASRAVAPPTPASKRDCVKGSATP--SGQESRTAPGEARKAATLPEMSAGEESSSSD 468
Query: 351 SEPEAG-----------------DWRPEMSPCSNVVVTDVTSNLLTVTIKE 384
S+P++ DW+P S +V VTDVT+NL+TVT+KE
Sbjct: 469 SDPDSASPPSTGQNPSVSVQTSQDWKPTRSLIEHVFVTDVTANLITVTVKE 519
>gi|14249190 chromobox homolog 2 isoform 2 [Homo sapiens]
Length = 211
Score = 106 bits (265), Expect = 3e-23
Identities = 50/92 (54%), Positives = 71/92 (77%), Gaps = 1/92 (1%)
Query: 2 ELSAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKE 61
ELS+VGE+VFAAE I+ +R+RKG++EYLVKW+GW+ K+++WEPEENILD RL+ AF++KE
Sbjct: 3 ELSSVGEQVFAAECILSKRLRKGKLEYLVKWRGWSSKHNSWEPEENILDPRLLLAFQKKE 62
Query: 62 RERELYGPKKRGPKPKTFLLKARAQAEALRIS 93
E+E+ +KRG +P+ K A + R S
Sbjct: 63 HEKEVQN-RKRGKRPRGRPRKLTAMSSCSRRS 93
>gi|188035910 heterochromatin protein 1-alpha [Homo sapiens]
Length = 191
Score = 59.3 bits (142), Expect = 6e-09
Identities = 24/60 (40%), Positives = 43/60 (71%)
Query: 4 SAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERE 63
S+ E + E ++ RR+ KG++EYL+KWKG++ +++TWEPE+N+ LI+ F +K ++
Sbjct: 13 SSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKK 72
>gi|188035908 heterochromatin protein 1-alpha [Homo sapiens]
Length = 191
Score = 59.3 bits (142), Expect = 6e-09
Identities = 24/60 (40%), Positives = 43/60 (71%)
Query: 4 SAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERE 63
S+ E + E ++ RR+ KG++EYL+KWKG++ +++TWEPE+N+ LI+ F +K ++
Sbjct: 13 SSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKK 72
>gi|6912292 heterochromatin protein 1-alpha [Homo sapiens]
Length = 191
Score = 59.3 bits (142), Expect = 6e-09
Identities = 24/60 (40%), Positives = 43/60 (71%)
Query: 4 SAVGERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERE 63
S+ E + E ++ RR+ KG++EYL+KWKG++ +++TWEPE+N+ LI+ F +K ++
Sbjct: 13 SSEDEEEYVVEKVLDRRVVKGQVEYLLKWKGFSEEHNTWEPEKNLDCPELISEFMKKYKK 72
>gi|5803076 heterochromatin protein 1-beta [Homo sapiens]
Length = 185
Score = 59.3 bits (142), Expect = 6e-09
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 8 ERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKER 62
E + E ++ RR+ KG++EYL+KWKG++ + +TWEPEEN+ LIA F Q ++
Sbjct: 18 EEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQK 72
>gi|187960037 heterochromatin protein 1-beta [Homo sapiens]
Length = 185
Score = 59.3 bits (142), Expect = 6e-09
Identities = 25/55 (45%), Positives = 39/55 (70%)
Query: 8 ERVFAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKER 62
E + E ++ RR+ KG++EYL+KWKG++ + +TWEPEEN+ LIA F Q ++
Sbjct: 18 EEEYVVEKVLDRRVVKGKVEYLLKWKGFSDEDNTWEPEENLDCPDLIAEFLQSQK 72
>gi|154146199 sal-like 3 [Homo sapiens]
Length = 1300
Score = 58.9 bits (141), Expect = 8e-09
Identities = 58/192 (30%), Positives = 84/192 (43%), Gaps = 35/192 (18%)
Query: 183 KGAGGGGAGQGAGALARPKVPSRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKPPPAPL 242
+ AGG GAG G A A P + + + + ++ + L QIR + +PPP P
Sbjct: 186 RAAGGSGAGGGVAAAAVPLILEQLMAL-QQQQIHQLQLIEQIRSQ---VALMQRPPPRPS 241
Query: 243 VAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETVSP 302
++P+ A SAPGP A P A S+G P+ S P +P
Sbjct: 242 LSPA---AAPSAPGP----APSQLPGLAALPLSAGAPAAAIAGSGP-----------AAP 283
Query: 303 SAPSWREPEVLDLSLPPESAAT--------SKRAPPEVTAAAGPAPPTAPEPAGASSEPE 354
+A +P LS P A+T + AP A A PAP AP+ A ASS+P+
Sbjct: 284 AAFEGAQP----LSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAPAPQSA-ASSQPQ 338
Query: 355 AGDWRPEMSPCS 366
+ P ++P S
Sbjct: 339 SASTPPALAPGS 350
Score = 37.4 bits (85), Expect = 0.025
Identities = 32/97 (32%), Positives = 44/97 (45%), Gaps = 11/97 (11%)
Query: 248 GKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSW 307
G AE SAP APAAP A + S+ S PQS+ TPP L P ++ +AP
Sbjct: 304 GPAEPSAPAAPSAAPAPAAPAPAPAPQSAA--SSQPQSA---STPPALAPGSLLGAAPGL 358
Query: 308 REPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAP 344
P L P+++A+ P + + A A P
Sbjct: 359 PSP------LLPQTSASGVIFPNPLVSIAATANALDP 389
Score = 36.2 bits (82), Expect = 0.056
Identities = 51/191 (26%), Positives = 69/191 (36%), Gaps = 34/191 (17%)
Query: 245 PSPGKAEASAPGPGLLLAAPAAPYDARSSG--SSGCPSPTPQSSDPDD----------TP 292
P G E +APG G A + P ++RS G +S C + D P
Sbjct: 20 PPDGAPEHAAPGEGAE-DADSGP-ESRSGGEETSVCEKCCAEFFKWADFLEHQRSCTKLP 77
Query: 293 PKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSE 352
P L+ +P+ P PE S P E A + A G A P E +E
Sbjct: 78 PVLIVHEDAPAPPPEDFPEPSPASSPSERAESEAAEEAGAEGAEGEARPVEKEAEPMDAE 137
Query: 353 PEAGDWRPEM---------SPCSNVVVTDVTSNLL---TVTIKEFCNPEDFEKVAAGVAG 400
P AGD R +P T+VT L V + +F A AG
Sbjct: 138 P-AGDTRAPRPPPAAPAPPTPAYGAPSTNVTLEALLSTKVAVAQFSQ-------GARAAG 189
Query: 401 AAGGGGSIGAS 411
+G GG + A+
Sbjct: 190 GSGAGGGVAAA 200
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 58.2 bits (139), Expect = 1e-08
Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 25/156 (16%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PAP + +P + A+ P P AP P + ++ P PTP ++ P PE
Sbjct: 177 PAPPSSSAPPETTAAPPTPSATTQAP--PSSSAPPETTAAP-PTPPATTPAPPSSSAPPE 233
Query: 299 TVS-PSAPSWREPEVLDLSLPPESAA------------TSKRAPPEVTA------AAGPA 339
T + P PS P L S PPE+ A +S APPE TA A PA
Sbjct: 234 TTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPA 293
Query: 340 PPTAPEPAGASSEPEAGDWRPEMSPCSNVVVTDVTS 375
PP++P P ++ P P SP + T TS
Sbjct: 294 PPSSPAPQETTAAPIT---TPNSSPTTLAPDTSETS 326
Score = 48.9 bits (115), Expect = 8e-06
Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Query: 250 AEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWRE 309
A ++P P AAP P S+ P+P S+ P+ T P + + PS
Sbjct: 155 APVNSPAPQDTTAAPPTP-------SATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSA 207
Query: 310 PEVLDLSLPPESAAT----SKRAPPEVTAAAGPAPPTAPEPAGASSEPE 354
P + P A T S APPE TAA T P P +S+ PE
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPE 256
Score = 47.4 bits (111), Expect = 2e-05
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 272 SSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAAT----SKR 327
SS ++ P +P D PP P +P+ PS P + P SA T S
Sbjct: 149 SSVATLAPVNSPAPQDTTAAPPT--PSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSS 206
Query: 328 APPEVTAAAGPAPPTAPEPAGASSEPE 354
APPE TAA P T P P +S+ PE
Sbjct: 207 APPETTAAPPTPPATTPAPPSSSAPPE 233
Score = 39.3 bits (90), Expect = 0.007
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 10/116 (8%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PAP + +P + A+ P P A AP + + + PTP ++ D + PE
Sbjct: 223 PAPPSSSAPPETTAAPPTPS---ATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPE 279
Query: 299 -TVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEP 353
T +P PS P PP S A + +T AP+ + S+ P
Sbjct: 280 TTAAPPTPSATTP------APPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Score = 32.3 bits (72), Expect = 0.80
Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 16/145 (11%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLL 296
PP P+P S+ P A P P SS P ++ P TP
Sbjct: 238 PPTPSATTPAP----LSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP--TPSATT 291
Query: 297 PETVSPSAPSWRE--------PEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
P PS+P+ +E P +L P+++ TS + T + T +P
Sbjct: 292 P--APPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTS 349
Query: 349 ASSEPEAGDWRPEMSPCSNVVVTDV 373
A + + + M N ++ D+
Sbjct: 350 APGQNKISRFLLYMKNLLNRIIDDM 374
>gi|222418649 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 58.2 bits (139), Expect = 1e-08
Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 25/156 (16%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PAP + +P + A+ P P AP P + ++ P PTP ++ P PE
Sbjct: 177 PAPPSSSAPPETTAAPPTPSATTQAP--PSSSAPPETTAAP-PTPPATTPAPPSSSAPPE 233
Query: 299 TVS-PSAPSWREPEVLDLSLPPESAA------------TSKRAPPEVTA------AAGPA 339
T + P PS P L S PPE+ A +S APPE TA A PA
Sbjct: 234 TTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPA 293
Query: 340 PPTAPEPAGASSEPEAGDWRPEMSPCSNVVVTDVTS 375
PP++P P ++ P P SP + T TS
Sbjct: 294 PPSSPAPQETTAAPIT---TPNSSPTTLAPDTSETS 326
Score = 48.9 bits (115), Expect = 8e-06
Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Query: 250 AEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWRE 309
A ++P P AAP P S+ P+P S+ P+ T P + + PS
Sbjct: 155 APVNSPAPQDTTAAPPTP-------SATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSA 207
Query: 310 PEVLDLSLPPESAAT----SKRAPPEVTAAAGPAPPTAPEPAGASSEPE 354
P + P A T S APPE TAA T P P +S+ PE
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPE 256
Score = 47.4 bits (111), Expect = 2e-05
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 272 SSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAAT----SKR 327
SS ++ P +P D PP P +P+ PS P + P SA T S
Sbjct: 149 SSVATLAPVNSPAPQDTTAAPPT--PSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSS 206
Query: 328 APPEVTAAAGPAPPTAPEPAGASSEPE 354
APPE TAA P T P P +S+ PE
Sbjct: 207 APPETTAAPPTPPATTPAPPSSSAPPE 233
Score = 39.3 bits (90), Expect = 0.007
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 10/116 (8%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PAP + +P + A+ P P A AP + + + PTP ++ D + PE
Sbjct: 223 PAPPSSSAPPETTAAPPTPS---ATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPE 279
Query: 299 -TVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEP 353
T +P PS P PP S A + +T AP+ + S+ P
Sbjct: 280 TTAAPPTPSATTP------APPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Score = 32.3 bits (72), Expect = 0.80
Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 16/145 (11%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLL 296
PP P+P S+ P A P P SS P ++ P TP
Sbjct: 238 PPTPSATTPAP----LSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP--TPSATT 291
Query: 297 PETVSPSAPSWRE--------PEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
P PS+P+ +E P +L P+++ TS + T + T +P
Sbjct: 292 P--APPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTS 349
Query: 349 ASSEPEAGDWRPEMSPCSNVVVTDV 373
A + + + M N ++ D+
Sbjct: 350 APGQNKISRFLLYMKNLLNRIIDDM 374
>gi|222418645 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 58.2 bits (139), Expect = 1e-08
Identities = 49/156 (31%), Positives = 66/156 (42%), Gaps = 25/156 (16%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PAP + +P + A+ P P AP P + ++ P PTP ++ P PE
Sbjct: 177 PAPPSSSAPPETTAAPPTPSATTQAP--PSSSAPPETTAAP-PTPPATTPAPPSSSAPPE 233
Query: 299 TVS-PSAPSWREPEVLDLSLPPESAA------------TSKRAPPEVTA------AAGPA 339
T + P PS P L S PPE+ A +S APPE TA A PA
Sbjct: 234 TTAAPPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSATTPA 293
Query: 340 PPTAPEPAGASSEPEAGDWRPEMSPCSNVVVTDVTS 375
PP++P P ++ P P SP + T TS
Sbjct: 294 PPSSPAPQETTAAPIT---TPNSSPTTLAPDTSETS 326
Score = 48.9 bits (115), Expect = 8e-06
Identities = 34/109 (31%), Positives = 45/109 (41%), Gaps = 11/109 (10%)
Query: 250 AEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWRE 309
A ++P P AAP P S+ P+P S+ P+ T P + + PS
Sbjct: 155 APVNSPAPQDTTAAPPTP-------SATTPAPPSSSAPPETTAAPPTPSATTQAPPSSSA 207
Query: 310 PEVLDLSLPPESAAT----SKRAPPEVTAAAGPAPPTAPEPAGASSEPE 354
P + P A T S APPE TAA T P P +S+ PE
Sbjct: 208 PPETTAAPPTPPATTPAPPSSSAPPETTAAPPTPSATTPAPLSSSAPPE 256
Score = 47.4 bits (111), Expect = 2e-05
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 6/87 (6%)
Query: 272 SSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAAT----SKR 327
SS ++ P +P D PP P +P+ PS P + P SA T S
Sbjct: 149 SSVATLAPVNSPAPQDTTAAPPT--PSATTPAPPSSSAPPETTAAPPTPSATTQAPPSSS 206
Query: 328 APPEVTAAAGPAPPTAPEPAGASSEPE 354
APPE TAA P T P P +S+ PE
Sbjct: 207 APPETTAAPPTPPATTPAPPSSSAPPE 233
Score = 39.3 bits (90), Expect = 0.007
Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 10/116 (8%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PAP + +P + A+ P P A AP + + + PTP ++ D + PE
Sbjct: 223 PAPPSSSAPPETTAAPPTPS---ATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPE 279
Query: 299 -TVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEP 353
T +P PS P PP S A + +T AP+ + S+ P
Sbjct: 280 TTAAPPTPSATTP------APPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAP 329
Score = 32.3 bits (72), Expect = 0.80
Identities = 32/145 (22%), Positives = 52/145 (35%), Gaps = 16/145 (11%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLL 296
PP P+P S+ P A P P SS P ++ P TP
Sbjct: 238 PPTPSATTPAP----LSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPP--TPSATT 291
Query: 297 PETVSPSAPSWRE--------PEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
P PS+P+ +E P +L P+++ TS + T + T +P
Sbjct: 292 P--APPSSPAPQETTAAPITTPNSSPTTLAPDTSETSAAPTHQTTTSVTTQTTTTKQPTS 349
Query: 349 ASSEPEAGDWRPEMSPCSNVVVTDV 373
A + + + M N ++ D+
Sbjct: 350 APGQNKISRFLLYMKNLLNRIIDDM 374
>gi|15082258 chromobox homolog 3 [Homo sapiens]
Length = 183
Score = 56.2 bits (134), Expect = 5e-08
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 11 FAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERERELYGPK 70
F E ++ RR+ G++EY +KWKG+ +TWEPEEN+ LI AF ++ G +
Sbjct: 30 FVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKA----GKE 85
Query: 71 KRGPKPKT 78
K G K K+
Sbjct: 86 KDGTKRKS 93
>gi|20544151 chromobox homolog 3 [Homo sapiens]
Length = 183
Score = 56.2 bits (134), Expect = 5e-08
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 4/68 (5%)
Query: 11 FAAESIIKRRIRKGRIEYLVKWKGWAIKYSTWEPEENILDSRLIAAFEQKERERELYGPK 70
F E ++ RR+ G++EY +KWKG+ +TWEPEEN+ LI AF ++ G +
Sbjct: 30 FVVEKVLDRRVVNGKVEYFLKWKGFTDADNTWEPEENLDCPELIEAFLNSQKA----GKE 85
Query: 71 KRGPKPKT 78
K G K K+
Sbjct: 86 KDGTKRKS 93
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS--------DP 288
PP P PG PGPG PA P +R G G P P S P
Sbjct: 222 PPSVSATGPGPGPGPGPGPGPG-----PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 289 DDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
PPK PE P A + +PP+ APP V AA P P + G
Sbjct: 277 PGGPPKPWPE--GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 349 ASSEP 353
++P
Sbjct: 335 QPAQP 339
Score = 28.9 bits (63), Expect = 8.9
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS 286
P P P PG + P PG +L P + G PSP P S+
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMG-PSPGPPSA 52
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS--------DP 288
PP P PG PGPG PA P +R G G P P S P
Sbjct: 222 PPSVSATGPGPGPGPGPGPGPG-----PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 289 DDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
PPK PE P A + +PP+ APP V AA P P + G
Sbjct: 277 PGGPPKPWPE--GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 349 ASSEP 353
++P
Sbjct: 335 QPAQP 339
Score = 28.9 bits (63), Expect = 8.9
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS 286
P P P PG + P PG +L P + G PSP P S+
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMG-PSPGPPSA 52
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS--------DP 288
PP P PG PGPG PA P +R G G P P S P
Sbjct: 222 PPSVSATGPGPGPGPGPGPGPG-----PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 289 DDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
PPK PE P A + +PP+ APP V AA P P + G
Sbjct: 277 PGGPPKPWPE--GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 349 ASSEP 353
++P
Sbjct: 335 QPAQP 339
Score = 28.9 bits (63), Expect = 8.9
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS 286
P P P PG + P PG +L P + G PSP P S+
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMG-PSPGPPSA 52
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS--------DP 288
PP P PG PGPG PA P +R G G P P S P
Sbjct: 222 PPSVSATGPGPGPGPGPGPGPG-----PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 289 DDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
PPK PE P A + +PP+ APP V AA P P + G
Sbjct: 277 PGGPPKPWPE--GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 349 ASSEP 353
++P
Sbjct: 335 QPAQP 339
Score = 28.9 bits (63), Expect = 8.9
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS 286
P P P PG + P PG +L P + G PSP P S+
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMG-PSPGPPSA 52
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS--------DP 288
PP P PG PGPG PA P +R G G P P S P
Sbjct: 222 PPSVSATGPGPGPGPGPGPGPG-----PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 289 DDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
PPK PE P A + +PP+ APP V AA P P + G
Sbjct: 277 PGGPPKPWPE--GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 349 ASSEP 353
++P
Sbjct: 335 QPAQP 339
Score = 28.9 bits (63), Expect = 8.9
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS 286
P P P PG + P PG +L P + G PSP P S+
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMG-PSPGPPSA 52
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS--------DP 288
PP P PG PGPG PA P +R G G P P S P
Sbjct: 222 PPSVSATGPGPGPGPGPGPGPG-----PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 289 DDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
PPK PE P A + +PP+ APP V AA P P + G
Sbjct: 277 PGGPPKPWPE--GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 349 ASSEP 353
++P
Sbjct: 335 QPAQP 339
Score = 28.9 bits (63), Expect = 8.9
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS 286
P P P PG + P PG +L P + G PSP P S+
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMG-PSPGPPSA 52
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 54.3 bits (129), Expect = 2e-07
Identities = 38/125 (30%), Positives = 45/125 (36%), Gaps = 15/125 (12%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS--------DP 288
PP P PG PGPG PA P +R G G P P S P
Sbjct: 222 PPSVSATGPGPGPGPGPGPGPG-----PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQP 276
Query: 289 DDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAG 348
PPK PE P A + +PP+ APP V AA P P + G
Sbjct: 277 PGGPPKPWPE--GPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPG 334
Query: 349 ASSEP 353
++P
Sbjct: 335 QPAQP 339
Score = 28.9 bits (63), Expect = 8.9
Identities = 16/50 (32%), Positives = 20/50 (40%), Gaps = 1/50 (2%)
Query: 237 PPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS 286
P P P PG + P PG +L P + G PSP P S+
Sbjct: 4 PDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMG-PSPGPPSA 52
>gi|115298682 HBxAg transactivated protein 2 [Homo sapiens]
Length = 2817
Score = 53.5 bits (127), Expect = 3e-07
Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 9/115 (7%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PA AP+P A S P +LA+ + P A + S+ P+P P +S P P +
Sbjct: 1834 PASAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSP--AAPVITAP 1891
Query: 299 TVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEP 353
T+ SAP+ P L P SA+ AP V +A PAPP + + +P
Sbjct: 1892 TIPASAPTASVP------LAPASASAPAPAPTPV-SAPNPAPPAPAQTQAQTHKP 1939
Score = 43.5 bits (101), Expect = 3e-04
Identities = 44/134 (32%), Positives = 54/134 (40%), Gaps = 16/134 (11%)
Query: 233 ALYKPPPAPLVAPSPGK------AEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTP--- 283
A P PA AP P A SAP P A+P AP A +S S+ P+ T
Sbjct: 1772 ATLTPVPASTSAPVPASTLAPVLASTSAPVP----ASPLAPVSASASVSASVPASTSAAA 1827
Query: 284 -QSSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLP-PESAATSKRAPPEVTAAAGPAPP 341
SS + P P S S P+ + S+P SA S AP AA+ PA P
Sbjct: 1828 ITSSSAPASAPAPTPILASVSTPA-SVTILASASIPILASALASTSAPTPAPAASSPAAP 1886
Query: 342 TAPEPAGASSEPEA 355
P +S P A
Sbjct: 1887 VITAPTIPASAPTA 1900
Score = 30.4 bits (67), Expect = 3.1
Identities = 20/72 (27%), Positives = 27/72 (37%), Gaps = 1/72 (1%)
Query: 279 PSPTPQSSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGP 338
P P P P P+ +P + P A + E L+ P S T K P T P
Sbjct: 1059 PPPPPPPQPPAPIQPQSVPPPIQPEAEKFPSTETATLAQKP-SQDTEKPLEPVSTVQVEP 1117
Query: 339 APPTAPEPAGAS 350
A T + A+
Sbjct: 1118 AVKTVNQQTMAA 1129
Score = 30.4 bits (67), Expect = 3.1
Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 6/137 (4%)
Query: 244 APSPGKAEASAPGPGLLLAAPAAPYDARSSGS----SGCPSPTPQSSDPDDTPPKLLPET 299
A G+++ S P A+SS S + P P S+ + LP T
Sbjct: 1714 ANEKGRSQTSKLPPRFAKKQATGIQQAQSSASVPPLASAPLPPSTSASVPASTSAPLPAT 1773
Query: 300 VSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTA-AAGPAPPTAPEPAGASSEPEAGDW 358
++P S P V +L P A+TS P A + A +A PA S+
Sbjct: 1774 LTPVPASTSAP-VPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITSSS 1832
Query: 359 RPEMSPCSNVVVTDVTS 375
P +P ++ V++
Sbjct: 1833 APASAPAPTPILASVST 1849
>gi|56118221 amyloid beta (A4) precursor protein-binding, family B,
member 1 interacting protein [Homo sapiens]
Length = 666
Score = 51.6 bits (122), Expect = 1e-06
Identities = 40/133 (30%), Positives = 54/133 (40%), Gaps = 19/133 (14%)
Query: 238 PPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLP 297
P + L P P + + G +PA P A+ +G G P+P P PP L
Sbjct: 512 PKSSLPPPPPVRRSSDTSG------SPATPLKAKGTGGGGLPAPPDDFLPPPPPPPPLDD 565
Query: 298 ETVSPSAPSWREPEVLDLSLPPES---AATSKRAPPEVTAAAGPAPPTAPEPA---GASS 351
+ P P + EP + PP S A S+ PP P PP AP PA ++
Sbjct: 566 PELPPPPPDFMEPPPDFVPPPPPSYAGIAGSELPPP-------PPPPPAPAPAPVPDSAR 618
Query: 352 EPEAGDWRPEMSP 364
P A RP + P
Sbjct: 619 PPPAVAKRPPVPP 631
>gi|33286436 gametogenetin [Homo sapiens]
Length = 652
Score = 50.8 bits (120), Expect = 2e-06
Identities = 74/265 (27%), Positives = 96/265 (36%), Gaps = 47/265 (17%)
Query: 188 GGAGQGAGALARPKVP-SRNRVI---------GKSKKFS-ESVLRTQIRHMKFG------ 230
GG G G G P P S+ R + G KF S RH +F
Sbjct: 314 GGDGDGEGCSGPPSAPASQARALPPPPYTTFPGSKPKFDWVSAPDGPERHFRFNGAGGGI 373
Query: 231 ------AFALYKPPPAPLVAPSPGKAEASAPGPG----LLLAAPAAPYDARSSGSSGCPS 280
A AL P +P P P + SAPGP LLA P + A ++G P
Sbjct: 374 GAPRRRAAALSGPWGSP---PPPPEQIHSAPGPRRPAPALLAPPTFIFPAPTNGEPMRPG 430
Query: 281 PTPQSSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLP-------PESAATSKRAP---P 330
P P + PP P T+ P A +P L ++ P ESA AP P
Sbjct: 431 P-PGLQELPPLPPPTPPPTLQPPA---LQPTPLPVAPPLTPGLGHKESALAPTAAPALPP 486
Query: 331 EVTAAAGPAPPTAPEPAGASSEPEAGDWRPEMSPCSNVVVTDVTSNLLT-VTIKEFCNPE 389
+ A PAP AP P A P P +P + S T K+ + +
Sbjct: 487 ALAADQAPAPSPAPAPTVAEPSPPVSAPAPAAAPIKTRTRRNKGSRAARGATRKDGLHGD 546
Query: 390 DFEKVAAGVA--GAAGGGGSIGASK 412
+ A + GGGG GAS+
Sbjct: 547 GPRERATATVPDSSGGGGGGSGASQ 571
Score = 42.4 bits (98), Expect = 8e-04
Identities = 53/197 (26%), Positives = 70/197 (35%), Gaps = 23/197 (11%)
Query: 231 AFALYKPPPAP----LVAPSPGKAEASAPGPGL--LLAAPAAPYDARSSGSSGCPSPTPQ 284
A A+ PPPAP L PS + A P P + LL A S P P P+
Sbjct: 90 AAAVSAPPPAPAGTLLPGPSKWQKPAGTPVPRIRRLLEASHRGQGDPPSLRPLKPPPPPR 149
Query: 285 SSDPDDTPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPT-- 342
DT P+ P P +W+ P LP E +R P + A +PPT
Sbjct: 150 QLSVKDTVPR-APSQFPPPLETWKPPP----PLPSERQPADRRITPALATPA--SPPTES 202
Query: 343 --APEPAGASSEPEAGDWRPEMSPCSNVVVTDVTSN---LLTVTIK---EFCNPEDFEKV 394
P G ++ G P D S L +T K P +
Sbjct: 203 QAGPRNQGQTAGRARGGAPPHAGEGEMAQPADSESGLSLLCKITFKSRPSLAPPAASSSL 262
Query: 395 AAGVAGAAGGGGSIGAS 411
AA + GGGG + A+
Sbjct: 263 AAKASLGGGGGGGLFAA 279
Score = 29.3 bits (64), Expect = 6.8
Identities = 30/123 (24%), Positives = 47/123 (38%), Gaps = 18/123 (14%)
Query: 253 SAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDT-----PPKLLPETVSPSAPSW 307
SA PGL++ P P + S+ P+P P++ PP T+ P W
Sbjct: 54 SATPPGLMV--PREPQASPSTLPLTLERPSPVMPPPEEAAAVSAPPPAPAGTLLPGPSKW 111
Query: 308 REP---EVLDLSLPPESAATSKRAPPEVTAAAGPAPP-------TAPEPAGASSEPEAGD 357
++P V + E++ + PP + P PP T P A + P
Sbjct: 112 QKPAGTPVPRIRRLLEASHRGQGDPPSLRPLKPPPPPRQLSVKDTVPR-APSQFPPPLET 170
Query: 358 WRP 360
W+P
Sbjct: 171 WKP 173
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 50.8 bits (120), Expect = 2e-06
Identities = 50/178 (28%), Positives = 65/178 (36%), Gaps = 30/178 (16%)
Query: 231 AFALYKPPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDD 290
A A PPP P AP P A +A P A AA A S P P Q + P
Sbjct: 121 AAAAAAPPPTP--APPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLA 178
Query: 291 TPPKLLPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGAS 350
PP +P+AP P V PP A +RAPP AA P P P+P
Sbjct: 179 APPP------APAAP----PAV----APP---AGPRRAPPPAVAAREPPLPPPPQPPAPP 221
Query: 351 SEPEAGDWRPEMSPCSNVVVTDVTSNLLTVTIKEFCNPEDFEKVAAGVAGAAGGGGSI 408
+ + +P+ P V + P +V + G+ G GG +
Sbjct: 222 QQQQPPPPQPQPPPEGGAVRAGGAA-----------RPVSLREVVRYLGGSGGAGGRL 268
Score = 42.7 bits (99), Expect = 6e-04
Identities = 41/122 (33%), Positives = 53/122 (43%), Gaps = 26/122 (21%)
Query: 238 PPAPLVAP--SPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKL 295
PPAP AP +P A A+AP P P AP A + P+ P+++ T P
Sbjct: 108 PPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAA------PARAPRAAAAAATAPP- 160
Query: 296 LPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPT----APEPAGASS 351
+ P+ P R L+ PP + A APP V APP AP PA A+
Sbjct: 161 ---SPGPAQPGPRAQRAAPLAAPPPAPA----APPAV------APPAGPRRAPPPAVAAR 207
Query: 352 EP 353
EP
Sbjct: 208 EP 209
Score = 37.7 bits (86), Expect = 0.019
Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 14/107 (13%)
Query: 247 PGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPS 306
P + A+ P P P AP A ++ ++ P PTP P P V+ +AP+
Sbjct: 101 PPRRGATPPAP------PRAPRGAPAAAAAAAPPPTPAPPPP--------PAPVAAAAPA 146
Query: 307 WREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEP 353
+ P S ++ P AA APP AP A + P
Sbjct: 147 RAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPP 193
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 50.8 bits (120), Expect = 2e-06
Identities = 48/135 (35%), Positives = 54/135 (40%), Gaps = 22/135 (16%)
Query: 237 PPPAPLVA-----PSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDT 291
PP AP A P PG A++ G P P + P+PTPQ P
Sbjct: 1422 PPLAPAAAVPGPPPLPGLPSANSNG------TPEPPLLEEKPPPTPPPAPTPQPQPP--- 1472
Query: 292 PPKLLPETVSPS-----APSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEP 346
PP P+ PS AP+ P L PP A S PP AA APP EP
Sbjct: 1473 PPPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPP--EEP 1530
Query: 347 AGASSE-PEAGDWRP 360
A S E PE D RP
Sbjct: 1531 AAPSPEDPELPDTRP 1545
Score = 48.5 bits (114), Expect = 1e-05
Identities = 71/272 (26%), Positives = 95/272 (34%), Gaps = 50/272 (18%)
Query: 141 GGSPGLR-PPISPFSETVRIINRKVKPREPKRNRIILNLKVIDKGAGGGGAGQGAGALA- 198
GGS G PP +P+ K P+ +I +D+GA G G L
Sbjct: 675 GGSGGAGGPPGTPYELA------KEDPQRYHLQSVIRTSASLDEGATAA-LELGLGRLKE 727
Query: 199 RPKVPSRNRVIGKSKK-FSESVLRTQIRHMKFGAFALYKPPPAPLVA----PSPGKAEAS 253
+ K P R G++ + + SV+ + GAF PPP P A P+P
Sbjct: 728 KKKGPERG---GETPEGLATSVVHYGAGAKELGAFLQKSPPPPPPTAQSTQPTPHGLLLE 784
Query: 254 APGPGLLLAAPAAPYDARSSGSSGCPSPTPQSS-------------------DPDDTPPK 294
A GP L L P P S S PSP+P +S P PP
Sbjct: 785 AGGPDLPLVLPPPPPQLLPSVLSHAPSPSPSASKVGVHLLEPATRDGAPQPPPPPPPPPP 844
Query: 295 LLPETVSPSAPS-WREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPT----------- 342
+P + S EP L PE + A E+ A P PP
Sbjct: 845 PMPLQLEAHLRSHGLEPAAPSPRLRPEESLDPPGAMQELLGALEPLPPAPGDTGVGPPNS 904
Query: 343 -APEPAGASSEPE-AGDWRPEMSPCSNVVVTD 372
+PAGA P G P P +++ D
Sbjct: 905 EGKDPAGAYRSPSPQGTKAPRFVPLTSICFPD 936
Score = 48.5 bits (114), Expect = 1e-05
Identities = 37/110 (33%), Positives = 43/110 (39%), Gaps = 23/110 (20%)
Query: 236 KPPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKL 295
KPPP P AP+P + + P P A P+ P +PTP S P PP
Sbjct: 1456 KPPPTPPPAPTP-QPQPPPPPPPPQPALPSPP---------PLVAPTPSSPPPPPLPPP- 1504
Query: 296 LPETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPE 345
P PS P PP AA APPE AA P P P+
Sbjct: 1505 -PPPAMPSPPP-----------PPPPAAAPLAAPPEEPAAPSPEDPELPD 1542
Score = 37.7 bits (86), Expect = 0.019
Identities = 44/172 (25%), Positives = 68/172 (39%), Gaps = 38/172 (22%)
Query: 204 SRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKPPPAPLVAPSPGKAEASAPGPGLLLAA 263
++NR KF E+V + +++ A + PP P+ K SA G +
Sbjct: 1638 AKNRYQRLYVKFLENVNKKD--YVRVCARKPWHRPPVPVRRSGQAKNPVSAGG------S 1689
Query: 264 PAAPYDARSSGSSGCPSPTPQSSDPDDT----PPKLLPETVSPSAPSWREPEVL------ 313
A P A P+P P+ P+ T PP+ PET P P+ +P +L
Sbjct: 1690 SAPPPKA--------PAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLLRPVEKE 1741
Query: 314 ---------DLSLPPESAATSKRAPPEVTAAAG-PAPPTAPE--PAGASSEP 353
+ L E A + ++ PE + A G PA P+ P +EP
Sbjct: 1742 KEKEKVTRGERPLRGERATSGRQTRPERSLATGQPATSRLPKARPTKVKAEP 1793
Score = 33.5 bits (75), Expect = 0.36
Identities = 41/180 (22%), Positives = 58/180 (32%), Gaps = 25/180 (13%)
Query: 183 KGAGGGGAGQGAGALARPKVPSRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKPPPAPL 242
K +G GGAG A + +P+ + G+ ++ ++ G PP P
Sbjct: 431 KASGAGGAGGQAYSPGQPQGLLGPQAYGQGFGGGQAQDLSKAPSYSGG------PPQPPS 484
Query: 243 VAPSPGKAEASAPGP----GLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
P PG A + P G L PY ++ S G P+ +P S P L
Sbjct: 485 GPPPPGLATCQSYSPDQLQGQLYGVQGEPYPGPAAHSQGLPTASPSLSYSTGHSPAL--- 541
Query: 299 TVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEPEAGDW 358
S W P S A P +PP P G S G +
Sbjct: 542 --SGHGGGW----------GPSSLGGGGEASPSHIIRPLQSPPATGRPPGVGSPGAPGKY 589
Score = 33.5 bits (75), Expect = 0.36
Identities = 29/99 (29%), Positives = 36/99 (36%), Gaps = 17/99 (17%)
Query: 267 PYDARSSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSWREPEV----LDLSLPPESA 322
P D + P P P + DP P S PE LD + PPE
Sbjct: 968 PEDEGDPKAGAGPPPGPPAYDPYGP--------YCPGRASGAGPETPGLGLDPNKPPELP 1019
Query: 323 ATSKRAPPEVTA-----AAGPAPPTAPEPAGASSEPEAG 356
+T P + AA P PP P P +SEP+ G
Sbjct: 1020 STVNAEPLGLIQSGPHQAAPPPPPPPPPPPAPASEPKGG 1058
Score = 32.0 bits (71), Expect = 1.1
Identities = 35/110 (31%), Positives = 46/110 (41%), Gaps = 25/110 (22%)
Query: 233 ALYKPPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTP 292
AL PPP AP+P +S P P L P P A S P P P ++ P P
Sbjct: 1481 ALPSPPPLV--APTP----SSPPPPPL----PPPPPPAMPSP----PPPPPPAAAPLAAP 1526
Query: 293 PKLLPETVSPSAPSWREPEV-----LDLSLPPESAATSKRAPPEVTAAAG 337
P+ P+APS +PE+ L L+ E+AA E + G
Sbjct: 1527 PE------EPAAPSPEDPELPDTRPLHLAKKQETAAVCGETDEEAGESGG 1570
Score = 30.0 bits (66), Expect = 4.0
Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 43/170 (25%)
Query: 183 KGAGGGGAGQGAGALARPKVPSRNRVIGKSKKFSESVLRTQIRHMKFGAFALYKPPPAPL 242
+ AGGGGAG G G RP + S GK +GA A P P
Sbjct: 366 EAAGGGGAGGGGGGY-RPIIQSPGYKTGKG---------------GYGAAAGGATRPPPP 409
Query: 243 VAPSPGKAEASAPGPGLLLAAPAAPY-DARSSGSSGCPSPTPQSSDPDDTPPKLLPETVS 301
+ + K ++ L PAA Y ++SG+ G Q+ P L P+
Sbjct: 410 RSTATPKCQS--------LGGPAAAYATGKASGAGGAGG---QAYSPGQPQGLLGPQAY- 457
Query: 302 PSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASS 351
+ + DLS P + PP+ PP+ P P G ++
Sbjct: 458 --GQGFGGGQAQDLSKAPSYSG----GPPQ--------PPSGPPPPGLAT 493
>gi|189181724 proteoglycan 4 isoform D [Homo sapiens]
Length = 1270
Score = 50.4 bits (119), Expect = 3e-06
Identities = 38/145 (26%), Positives = 54/145 (37%), Gaps = 5/145 (3%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PAP P P P +AP P + + P+PT TP + P
Sbjct: 270 PAPTTPKEPAPTTTKEPAPTTTKSAPTTPKEPAPTTPKK-PAPTTPKEPAPTTPKEPTPT 328
Query: 299 TVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEPEAGDW 358
T AP+ +EP + P E A T+ + P T PAP T EPA +++ +
Sbjct: 329 TPKEPAPTTKEPAP---TTPKEPAPTAPKKPAPTTPKE-PAPTTPKEPAPTTTKEPSPTT 384
Query: 359 RPEMSPCSNVVVTDVTSNLLTVTIK 383
E +P + T T K
Sbjct: 385 PKEPAPTTTKSAPTTTKEPAPTTTK 409
Score = 48.5 bits (114), Expect = 1e-05
Identities = 48/179 (26%), Positives = 70/179 (39%), Gaps = 17/179 (9%)
Query: 212 SKKFSESVLRTQIRHMKFGAFALYKPPPAPLVAPSPGKAEASAPGPGLLLAAPAAPYDAR 271
S K ++S+ +T + + + L KP P KAE + GP L P +
Sbjct: 172 SAKETQSIEKTSAKDLAPTSKVLAKPTP---------KAETTTKGPALTTPKEPTPTTPK 222
Query: 272 SSGSSGCPSPTPQSSDPDDTPPKLLPETVSPSAPSW-REPEVLDL-----SLPPESAATS 325
S+ PTP + T PK T + SAP+ +EP + P E A T+
Sbjct: 223 EPASTTPKEPTPTTIKSAPTTPKEPAPTTTKSAPTTPKEPAPTTTKEPAPTTPKEPAPTT 282
Query: 326 KRAPPEVTAAAGPAPPTAPEPAGASSEPEAGDWRPEMSPCSNVVVTDVTSNLLTVTIKE 384
+ P T + AP T EPA + + A E +P + T T T KE
Sbjct: 283 TKEPAPTTTKS--APTTPKEPAPTTPKKPAPTTPKEPAPTTPKEPTPTTPKEPAPTTKE 339
Score = 47.4 bits (111), Expect = 2e-05
Identities = 44/157 (28%), Positives = 56/157 (35%), Gaps = 21/157 (13%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PAP P P P +AP + P+PT S P TP + P
Sbjct: 372 PAPTTTKEPSPTTPKEPAPTTTKSAPTTTKE---------PAPTTTKSAPT-TPKEPSPT 421
Query: 299 TVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEPEAGDW 358
T AP+ P E A T+ + P T PAP T EPA +++ A
Sbjct: 422 TTKEPAPT----------TPKEPAPTTPKKPAPTTPKE-PAPTTPKEPAPTTTKKPAPTT 470
Query: 359 RPEMSPCSNVVVTDVTSNLLTVTIKEFCNPEDFEKVA 395
E +P + T LT T E P EK A
Sbjct: 471 PKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPA 507
Score = 44.3 bits (103), Expect = 2e-04
Identities = 38/127 (29%), Positives = 47/127 (37%), Gaps = 5/127 (3%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLA-APAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLP 297
PAP P P P AP P + + TP+ P TP KL P
Sbjct: 442 PAPTTPKEPAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPT-TPEKLAP 500
Query: 298 ETVSPSAPSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEPEAGD 357
T P P+ PE L + P E T+ P T A AP T EPA + + A
Sbjct: 501 TT--PEKPAPTTPEELAPTTPEEPTPTTPEEPAPTTPKAA-APNTPKEPAPTTPKEPAPT 557
Query: 358 WRPEMSP 364
E +P
Sbjct: 558 TPKEPAP 564
Score = 42.0 bits (97), Expect = 0.001
Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 5/122 (4%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLA-APAAPYDARSSGSSGCPSPTPQSSDPD--DTPPKL 295
PAP P P P AP P + + TP+ P + P
Sbjct: 450 PAPTTPKEPAPTTTKKPAPTTPKEPAPTTPKETAPTTPKKLTPTTPEKLAPTTPEKPAPT 509
Query: 296 LPETVSPSAPSWREPEVLDLSLP--PESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEP 353
PE ++P+ P P + P P++AA + P T PAP T EPA + +
Sbjct: 510 TPEELAPTTPEEPTPTTPEEPAPTTPKAAAPNTPKEPAPTTPKEPAPTTPKEPAPTTPKE 569
Query: 354 EA 355
A
Sbjct: 570 TA 571
Score = 37.7 bits (86), Expect = 0.019
Identities = 41/162 (25%), Positives = 57/162 (35%), Gaps = 24/162 (14%)
Query: 240 APLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGC--PSPTPQSSDPDDTPPKLLP 297
AP P P P L AP + S+ C P+PT TP + P
Sbjct: 579 APTTLKEPAPTTPKKPAPKEL-----APTTTKEPTSTTCDKPAPTTPKGTAPTTPKEPAP 633
Query: 298 ETV---SPSAPSWREPEVLDLSLP--PESAATSKRAP-----PEVTAAAGPAP------- 340
T +P+ P P L P P+ A + AP P T + PAP
Sbjct: 634 TTPKEPAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETA 693
Query: 341 PTAPEPAGASSEPEAGDWRPEMSPCSNVVVTDVTSNLLTVTI 382
PT P+ ++ + PE P + V+ T+ TI
Sbjct: 694 PTTPKEPAPTTPKKPAPTTPETPPPTTSEVSTPTTTKEPTTI 735
Score = 37.4 bits (85), Expect = 0.025
Identities = 36/141 (25%), Positives = 51/141 (36%), Gaps = 7/141 (4%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLL-AAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLP 297
PAP P P P AP P + TP+ P + P
Sbjct: 546 PAPTTPKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKPAPKELAPTTTK 605
Query: 298 ETVSPSA--PSWREPEVLDLSLPPESAATSKRAPPEVTAAAGPAPPTAPEPAGASSEPEA 355
E S + P+ P+ + P E A T+ + P T G AP T EPA + + A
Sbjct: 606 EPTSTTCDKPAPTTPKGTAPTTPKEPAPTTPKEPAPTTPK-GTAPTTLKEPAPTTPKKPA 664
Query: 356 GDWRPEMSPCSNVVVTDVTSN 376
E++P + T TS+
Sbjct: 665 ---PKELAPTTTKGPTSTTSD 682
Score = 33.1 bits (74), Expect = 0.47
Identities = 37/137 (27%), Positives = 51/137 (37%), Gaps = 13/137 (9%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
P L +P K + P AP P + + P+PT TP P
Sbjct: 487 PKKLTPTTPEKLAPTTPEK----PAPTTPEELAPTTPEE-PTPTTPEEPAPTTPKAAAPN 541
Query: 299 TVSPSAPSWREPEVLDLSLPPESAATS-KRAPPEVTAAAGPAPPTAPEPAGASSEPEAGD 357
T AP+ P+ + P E A T+ K P T G AP T EPA + + A
Sbjct: 542 TPKEPAPT--TPKEPAPTTPKEPAPTTPKETAP--TTPKGTAPTTLKEPAPTTPKKPA-- 595
Query: 358 WRPEMSPCSNVVVTDVT 374
E++P + T T
Sbjct: 596 -PKELAPTTTKEPTSTT 611
Score = 33.1 bits (74), Expect = 0.47
Identities = 28/116 (24%), Positives = 37/116 (31%), Gaps = 10/116 (8%)
Query: 239 PAPLVAPSPGKAEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQSSDPDDTPPKLLPE 298
PAP P P P P G++ PT TP K P+
Sbjct: 615 PAPTTPKGTAPTTPKEPAP----TTPKEPAPTTPKGTA----PTTLKEPAPTTPKKPAPK 666
Query: 299 TVSPSAPSWREPEVLDLSLP--PESAATSKRAPPEVTAAAGPAPPTAPEPAGASSE 352
++P+ D P P+ A + P T PAP T P +SE
Sbjct: 667 ELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPTTPETPPPTTSE 722
Score = 32.0 bits (71), Expect = 1.1
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 13/144 (9%)
Query: 234 LYKPPPAPLVAPSPGK-AEASAPGPGLLLAAPAAPYDARSSGSSGCPSPTPQS-SDPDDT 291
L +P P P+P + A + GP + AP + + + P P + P T
Sbjct: 652 LKEPAPTTPKKPAPKELAPTTTKGPTSTTSDKPAPTTPKETAPTTPKEPAPTTPKKPAPT 711
Query: 292 PPKLLPETVSP-SAP-SWREPEVLDLSLPPESAATSKRAPPEVTAAAGP-APPTAPEPAG 348
P+ P T S S P + +EP + S P ES PE++A P A +P+ G
Sbjct: 712 TPETPPPTTSEVSTPTTTKEPTTIHKS-PDEST-------PELSAEPTPKALENSPKEPG 763
Query: 349 ASSEPEAGDWRPEMSPCSNVVVTD 372
+ +PEM+ + T+
Sbjct: 764 VPTTKTPAATKPEMTTTAKDKTTE 787
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.131 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,719,103
Number of Sequences: 37866
Number of extensions: 1320664
Number of successful extensions: 17495
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 1346
Number of HSP's that attempted gapping in prelim test: 10422
Number of HSP's gapped (non-prelim): 6207
length of query: 412
length of database: 18,247,518
effective HSP length: 105
effective length of query: 307
effective length of database: 14,271,588
effective search space: 4381377516
effective search space used: 4381377516
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.