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Search of human proteins with 46411168
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46411168 muscleblind-like 1 isoform d [Homo sapiens]
(302 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46411168 muscleblind-like 1 isoform d [Homo sapiens] 622 e-178
gi|46411170 muscleblind-like 1 isoform e [Homo sapiens] 613 e-176
gi|46411164 muscleblind-like 1 isoform b [Homo sapiens] 542 e-154
gi|41281591 muscleblind-like 1 isoform a [Homo sapiens] 533 e-152
gi|46411166 muscleblind-like 1 isoform c [Homo sapiens] 531 e-151
gi|46411174 muscleblind-like 1 isoform g [Homo sapiens] 448 e-126
gi|19387844 muscleblind-like 3 isoform G [Homo sapiens] 382 e-106
gi|30315649 muscleblind-like 3 isoform R [Homo sapiens] 348 3e-96
gi|46411172 muscleblind-like 1 isoform f [Homo sapiens] 304 7e-83
gi|21464125 muscleblind-like 2 isoform 1 [Homo sapiens] 299 2e-81
gi|46411180 muscleblind-like 2 isoform 3 [Homo sapiens] 255 3e-68
gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens] 60 2e-09
gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens] 46 4e-05
gi|193788659 cleavage and polyadenylation specific factor 4-like... 44 2e-04
gi|125987603 cleavage and polyadenylation specific factor 4, 30k... 41 0.001
gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa... 41 0.001
gi|223468622 makorin ring finger protein 1 isoform 2 [Homo sapiens] 38 0.010
gi|223468620 makorin ring finger protein 1 isoform 1 [Homo sapiens] 38 0.010
gi|18087829 zinc finger CCCH-type, antiviral 1-like [Homo sapiens] 34 0.14
gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo ... 34 0.18
gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo ... 34 0.18
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo... 33 0.24
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo... 33 0.24
gi|46094081 development and differentiation enhancing factor 1 [... 33 0.31
gi|114842410 zinc finger CCCH-type containing 11A [Homo sapiens] 33 0.31
gi|126352446 elastin isoform d precursor [Homo sapiens] 33 0.40
gi|126352440 elastin isoform a precursor [Homo sapiens] 33 0.40
gi|15812180 butyrate response factor 1 [Homo sapiens] 32 0.90
gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens] 32 0.90
gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens] 31 1.2
>gi|46411168 muscleblind-like 1 isoform d [Homo sapiens]
Length = 302
Score = 622 bits (1603), Expect = e-178
Identities = 302/302 (100%), Positives = 302/302 (100%)
Query: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREY 120
CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREY
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREY 120
Query: 121 QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIK 180
QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIK
Sbjct: 121 QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIK 180
Query: 181 AAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALAN 240
AAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALAN
Sbjct: 181 AAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALAN 240
Query: 241 MQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVT 300
MQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVT
Sbjct: 241 MQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYVT 300
Query: 301 QM 302
QM
Sbjct: 301 QM 302
>gi|46411170 muscleblind-like 1 isoform e [Homo sapiens]
Length = 314
Score = 613 bits (1580), Expect = e-176
Identities = 302/314 (96%), Positives = 302/314 (96%), Gaps = 12/314 (3%)
Query: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREY 120
CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREY
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREY 120
Query: 121 QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIK 180
QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIK
Sbjct: 121 QRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIK 180
Query: 181 AAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALAN 240
AAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALAN
Sbjct: 181 AAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALAN 240
Query: 241 MQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATATANQIPII 288
MQLQQHTAFLPP VPMVHGATPATVSAATTSATSVPFAATATANQIPII
Sbjct: 241 MQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATATANQIPII 300
Query: 289 SAEHLTSHKYVTQM 302
SAEHLTSHKYVTQM
Sbjct: 301 SAEHLTSHKYVTQM 314
>gi|46411164 muscleblind-like 1 isoform b [Homo sapiens]
Length = 370
Score = 542 bits (1397), Expect = e-154
Identities = 283/370 (76%), Positives = 289/370 (78%), Gaps = 68/370 (18%)
Query: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPPHLKTQLEINGRNN---------LIQQKNMA----------------- 94
CSRENCKYLHPPPHLKTQLEINGRNN L QQ +A
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV 120
Query: 95 ------------------------MLAQQMQLANAMMPGAPLQPV--------------- 115
+ A+ + A ++ G P PV
Sbjct: 121 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD 180
Query: 116 ---VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP 172
VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
Sbjct: 181 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP 240
Query: 173 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF 232
AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
Sbjct: 241 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF 300
Query: 233 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH 292
QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH
Sbjct: 301 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH 360
Query: 293 LTSHKYVTQM 302
LTSHKYVTQM
Sbjct: 361 LTSHKYVTQM 370
>gi|41281591 muscleblind-like 1 isoform a [Homo sapiens]
Length = 382
Score = 533 bits (1374), Expect = e-152
Identities = 283/382 (74%), Positives = 289/382 (75%), Gaps = 80/382 (20%)
Query: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPPHLKTQLEINGRNN---------LIQQKNMA----------------- 94
CSRENCKYLHPPPHLKTQLEINGRNN L QQ +A
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV 120
Query: 95 ------------------------MLAQQMQLANAMMPGAPLQPV--------------- 115
+ A+ + A ++ G P PV
Sbjct: 121 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD 180
Query: 116 ---VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP 172
VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
Sbjct: 181 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP 240
Query: 173 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF 232
AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
Sbjct: 241 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF 300
Query: 233 QYQQALANMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATA 280
QYQQALANMQLQQHTAFLPP VPMVHGATPATVSAATTSATSVPFAATA
Sbjct: 301 QYQQALANMQLQQHTAFLPPGSILCMTPATSVVPMVHGATPATVSAATTSATSVPFAATA 360
Query: 281 TANQIPIISAEHLTSHKYVTQM 302
TANQIPIISAEHLTSHKYVTQM
Sbjct: 361 TANQIPIISAEHLTSHKYVTQM 382
>gi|46411166 muscleblind-like 1 isoform c [Homo sapiens]
Length = 388
Score = 531 bits (1368), Expect = e-151
Identities = 283/388 (72%), Positives = 289/388 (74%), Gaps = 86/388 (22%)
Query: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPPHLKTQLEINGRNN---------LIQQKNMA----------------- 94
CSRENCKYLHPPPHLKTQLEINGRNN L QQ +A
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV 120
Query: 95 ------------------------MLAQQMQLANAMMPGAPLQPV--------------- 115
+ A+ + A ++ G P PV
Sbjct: 121 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD 180
Query: 116 ---VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP 172
VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
Sbjct: 181 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP 240
Query: 173 AHLQAKIKAAQYQVNQAAAAQAAATAAAM------------------GIPQAVLPPLPKR 214
AHLQAKIKAAQYQVNQAAAAQAAATAAAM GIPQAVLPPLPKR
Sbjct: 241 AHLQAKIKAAQYQVNQAAAAQAAATAAAMTQSAVKSLKRPLEATFDLGIPQAVLPPLPKR 300
Query: 215 PALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSV 274
PALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSV
Sbjct: 301 PALEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSV 360
Query: 275 PFAATATANQIPIISAEHLTSHKYVTQM 302
PFAATATANQIPIISAEHLTSHKYVTQM
Sbjct: 361 PFAATATANQIPIISAEHLTSHKYVTQM 388
>gi|46411174 muscleblind-like 1 isoform g [Homo sapiens]
Length = 342
Score = 448 bits (1152), Expect = e-126
Identities = 237/331 (71%), Positives = 245/331 (74%), Gaps = 69/331 (20%)
Query: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPPHLKTQLEINGRNN---------LIQQKNMA----------------- 94
CSRENCKYLHPPPHLKTQLEINGRNN L QQ +A
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV 120
Query: 95 ------------------------MLAQQMQLANAMMPGAPLQPV--------------- 115
+ A+ + A ++ G P PV
Sbjct: 121 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD 180
Query: 116 ---VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP 172
VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP
Sbjct: 181 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP 240
Query: 173 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF 232
AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF
Sbjct: 241 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF 300
Query: 233 QYQQALANMQLQQHTAFLPPVPMVHGATPAT 263
QYQQALANMQLQQHTAFLPP ++ TPAT
Sbjct: 301 QYQQALANMQLQQHTAFLPPGSIL-CMTPAT 330
Score = 100 bits (249), Expect = 2e-21
Identities = 65/178 (36%), Positives = 90/178 (50%), Gaps = 27/178 (15%)
Query: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
VCRE+QRG C+R + +C+FAHP+ S ++ + V C D +KGRCSRE CKY HPP HL
Sbjct: 18 VCREFQRGTCSRPDTECKFAHPSKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPPHL 75
Query: 176 QAKIKA-----AQYQVNQAAAAQAAATAAAMGIPQAVLPPLPK---RPALEKTNGATAVF 227
+ +++ Q N A AQ A AM +P A L P+P P+L TN + A F
Sbjct: 76 KTQLEINGRNNLIQQKNMAMLAQQMQLANAM-MPGAPLQPVPMFSVAPSL-ATNASAAAF 133
Query: 228 NTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQI 285
N + +L ++ LP PM+ P VP AA A A ++
Sbjct: 134 NPYLGPVSPSLVPAEI------LPTAPMLVTGNP---------GVPVPAAAAAAAQKL 176
>gi|19387844 muscleblind-like 3 isoform G [Homo sapiens]
Length = 354
Score = 382 bits (982), Expect = e-106
Identities = 207/358 (57%), Positives = 232/358 (64%), Gaps = 82/358 (22%)
Query: 2 AVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRC 61
AV+V IRDTKWLTLEVCREFQRGTCSR D +CKFAHP + C VENGRV+ACFDSLKGRC
Sbjct: 3 AVNVALIRDTKWLTLEVCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKGRC 62
Query: 62 SRENCKYLHPPPHLKTQLEINGRNNLIQQKNMA-MLAQQMQLA--NAMM----------- 107
+RENCKYLHPPPHLKTQLEINGRNNLIQQK A M AQQMQL NA M
Sbjct: 63 TRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQLMLQNAQMSSLGSFPMTPS 122
Query: 108 ---------------PGAPLQPV---------------------------------VCRE 119
PG L P VCRE
Sbjct: 123 IPANPPMAFNPYIPHPGMGLVPAELVPNTPVLIPGNPPLAMPGAVGPKLMRSDKLEVCRE 182
Query: 120 YQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKI 179
+QRGNC RGENDCR+AHP D++MI+ +DNTVT+CMDYIKGRCSREKCKYFHPPAHLQA++
Sbjct: 183 FQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREKCKYFHPPAHLQARL 242
Query: 180 KAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALA 239
KAA +Q+N +A A+AM + L +PKR ALEK NGAT VFN +F QQAL
Sbjct: 243 KAAHHQMNHSA-------ASAMALQPGTLQLIPKRSALEKPNGATPVFNPTVFHCQQALT 295
Query: 240 NMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATATANQI 285
N+QL Q AF+P VPM+HGATP TVSAATT ATSVPFAA T NQ+
Sbjct: 296 NLQLPQ-PAFIPAGPILCMAPASNIVPMMHGATPTTVSAATTPATSVPFAAPTTGNQL 352
>gi|30315649 muscleblind-like 3 isoform R [Homo sapiens]
Length = 334
Score = 348 bits (894), Expect = 3e-96
Identities = 193/363 (53%), Positives = 220/363 (60%), Gaps = 93/363 (25%)
Query: 2 AVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRC 61
AV+V IRDTKWLTLEVCREFQRGTCSR D +CKFAHP + C VENGRV+ACFDSLKGRC
Sbjct: 3 AVNVALIRDTKWLTLEVCREFQRGTCSRADADCKFAHPPRVCHVENGRVVACFDSLKGRC 62
Query: 62 SRENCKYLHPPPHLKTQLEINGRNNLIQQKN-MAMLAQQMQ--LANAMM----------- 107
+RENCKYLHPPPHLKTQLEINGRNNLIQQK AM AQQMQ L NA M
Sbjct: 63 TRENCKYLHPPPHLKTQLEINGRNNLIQQKTAAAMFAQQMQLMLQNAQMSSLGSFPMTPS 122
Query: 108 ---------------PGAPLQPV---------------------------------VCRE 119
PG L P VCRE
Sbjct: 123 IPANPPMAFNPYIPHPGMGLVPAELVPNTPVLIPGNPPLAMPGAVGPKLMRSDKLEVCRE 182
Query: 120 YQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKI 179
+QRGNC RGENDCR+AHP D++MI+ +DNTVT+CMDYIKGRCSREKCKYFHPPAHLQA++
Sbjct: 183 FQRGNCTRGENDCRYAHPTDASMIEASDNTVTICMDYIKGRCSREKCKYFHPPAHLQARL 242
Query: 180 KAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALA 239
KAA +Q+N +AA+ A T + +PQ +P P L +
Sbjct: 243 KAAHHQMNHSAASAMALT--NLQLPQPAF--IPAGPILCMAPASNI-------------- 284
Query: 240 NMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEHLTSHKYV 299
VPM+HGATP TVSAATT ATSVPFAA T NQIP +S + L S +V
Sbjct: 285 -------------VPMMHGATPTTVSAATTPATSVPFAAPTTGNQIPQLSIDELNSSMFV 331
Query: 300 TQM 302
+QM
Sbjct: 332 SQM 334
>gi|46411172 muscleblind-like 1 isoform f [Homo sapiens]
Length = 340
Score = 304 bits (778), Expect = 7e-83
Identities = 186/370 (50%), Positives = 202/370 (54%), Gaps = 98/370 (26%)
Query: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR
Sbjct: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGR 60
Query: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREY 120
CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPV
Sbjct: 61 CSRENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVPMFSV 120
Query: 121 QRGNCNRGENDC--RFAHPADSTMIDT------------------------------NDN 148
+ P +++ +
Sbjct: 121 APSLATNASAAAFNPYLGPVSPSLVPAEILPTAPMLVTGNPGVPVPAAAAAAAQKLMRTD 180
Query: 149 TVTVCMDYIKGRCSR--EKCKYFH----------------------------------PP 172
+ VC +Y +G C+R C++ H PP
Sbjct: 181 RLEVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPP 240
Query: 173 AHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIF 232
AHLQAKIKAAQYQVNQAAAAQAAATAAAM P + P P
Sbjct: 241 AHLQAKIKAAQYQVNQAAAAQAAATAAAM-FPWCTVLRQPLCP----------------- 282
Query: 233 QYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATANQIPIISAEH 292
Q Q P + +P ++ ATS P AA IPIISAEH
Sbjct: 283 ---------QQQHLPQVFPSLQQPQPTSPILDASTLLGATSCPAAA---GKMIPIISAEH 330
Query: 293 LTSHKYVTQM 302
LTSHKYVTQM
Sbjct: 331 LTSHKYVTQM 340
>gi|21464125 muscleblind-like 2 isoform 1 [Homo sapiens]
Length = 367
Score = 299 bits (766), Expect = 2e-81
Identities = 180/364 (49%), Positives = 206/364 (56%), Gaps = 79/364 (21%)
Query: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTEC-------------------------- 34
MA++V P+RDTKWLTLEVCR+FQRGTCSR D EC
Sbjct: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
Query: 35 ------KFAHPSKSCQVE---NGRVIACFDSLKGRCSRENCKY------LHPPPHLKTQL 79
K+ HP + + NGR + ++ LHP P
Sbjct: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
Query: 80 EINGRNNLIQQKNMAMLAQQMQLANA--------MMPGAPLQPV---------------- 115
I + +A + + L ++PG+P V
Sbjct: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
Query: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
VCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYFHPPAHL
Sbjct: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
Query: 176 QAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQ 233
QAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVFN +
Sbjct: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
Query: 234 YQQALANMQLQQHTAFLPP------------VPMVHGATPATVSAATTSATSVPFAATAT 281
YQQAL + QLQQH AF+P VPM+H AT ATVSAATT ATSVPFAATAT
Sbjct: 301 YQQALTSAQLQQHAAFIPTGSVLCMTPATSIVPMMHSATSATVSAATTPATSVPFAATAT 360
Query: 282 ANQI 285
ANQI
Sbjct: 361 ANQI 364
>gi|46411180 muscleblind-like 2 isoform 3 [Homo sapiens]
Length = 361
Score = 255 bits (652), Expect = 3e-68
Identities = 151/318 (47%), Positives = 176/318 (55%), Gaps = 67/318 (21%)
Query: 1 MAVSVTPIRDTKWLTLEVCREFQRGTCSRPDTEC-------------------------- 34
MA++V P+RDTKWLTLEVCR+FQRGTCSR D EC
Sbjct: 1 MALNVAPVRDTKWLTLEVCRQFQRGTCSRSDEECKFAHPPKSCQVENGRVIACFDSLKGR 60
Query: 35 ------KFAHPSKSCQVE---NGRVIACFDSLKGRCSRENCKY------LHPPPHLKTQL 79
K+ HP + + NGR + ++ LHP P
Sbjct: 61 CSRENCKYLHPPTHLKTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGP 120
Query: 80 EINGRNNLIQQKNMAMLAQQMQLANA--------MMPGAPLQPV---------------- 115
I + +A + + L ++PG+P V
Sbjct: 121 AIGTNTAISFAPYLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTATQKLLRTDKLE 180
Query: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
VCRE+QRGNC RGE DCRFAHPADSTMIDT+DNTVTVCMDYIKGRC REKCKYFHPPAHL
Sbjct: 181 VCREFQRGNCARGETDCRFAHPADSTMIDTSDNTVTVCMDYIKGRCMREKCKYFHPPAHL 240
Query: 176 QAKIKAAQYQVNQAA-AAQAAATAA-AMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQ 233
QAKIKAAQ+Q NQAA AAQAAA AA M P L PLPKR ALEK+NG +AVFN +
Sbjct: 241 QAKIKAAQHQANQAAVAAQAAAAAATVMAFPPGALHPLPKRQALEKSNGTSAVFNPSVLH 300
Query: 234 YQQALANMQLQQHTAFLP 251
YQQAL + QLQQH AF+P
Sbjct: 301 YQQALTSAQLQQHAAFIP 318
Score = 94.4 bits (233), Expect = 1e-19
Identities = 56/158 (35%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 116 VCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHL 175
VCR++QRG C+R + +C+FAHP S ++ + V C D +KGRCSRE CKY HPP HL
Sbjct: 18 VCRQFQRGTCSRSDEECKFAHPPKSCQVE--NGRVIACFDSLKGRCSRENCKYLHPPTHL 75
Query: 176 --QAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQ 233
Q +I + Q AA A P L P+P P TA+
Sbjct: 76 KTQLEINGRNNLIQQKTAAAMLAQQMQFMFPGTPLHPVPTFPVGPAIGTNTAI---SFAP 132
Query: 234 YQQALANMQLQQHTAFLPPVP-MVHGATPATVSAATTS 270
Y + T LP P +V G+ P TV +T +
Sbjct: 133 YLAPVTPGVGLVPTEILPTTPVIVPGSPPVTVPGSTAT 170
>gi|14249452 zinc finger CCCH-type containing 10 [Homo sapiens]
Length = 434
Score = 60.5 bits (145), Expect = 2e-09
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 18 VCREFQRGTCSRPDTECKFAHPSKS----CQVENGRVIACFDSLKGRCSRENCKYLHPPP 73
+CR+F R C R C++ HP S V I C D CSR NC+++H
Sbjct: 41 ICRDFLRNVCKR-GKRCRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECSRPNCRFIHGSK 99
Query: 74 HLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREYQRGNCNRGENDCR 133
+ + G + + +A + L+ A +P + +CR++ +G+C RG C+
Sbjct: 100 EDEDGYKKTGE---LPPRLRQKVAAGLGLSPADLPNGKEEVPICRDFLKGDCQRGAK-CK 155
Query: 134 FAH 136
F H
Sbjct: 156 FRH 158
Score = 45.1 bits (105), Expect = 8e-05
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 109 GAPLQPVVCREYQRGNCNRGENDCRFAHP--ADSTMIDTNDNTVTVCMDYIKGRCSREKC 166
G +CR++ R C RG+ CR+ HP ++ + + + N C D+ CSR C
Sbjct: 34 GGASSDAICRDFLRNVCKRGKR-CRYRHPDMSEVSNLGVSKNEFIFCHDFQNKECSRPNC 92
Query: 167 KYFHPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLP 209
++ H + K + + AA +G+ A LP
Sbjct: 93 RFIHGSKEDEDGYK----KTGELPPRLRQKVAAGLGLSPADLP 131
Score = 35.4 bits (80), Expect = 0.062
Identities = 35/150 (23%), Positives = 53/150 (35%), Gaps = 65/150 (43%)
Query: 53 CFDSLKGRCSR-ENCKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAP 111
C D L+ C R + C+Y HP +++ +NL KN
Sbjct: 42 CRDFLRNVCKRGKRCRYRHP--------DMSEVSNLGVSKN------------------- 74
Query: 112 LQPVVCREYQRGNCNRGENDCRFAH------------------------------PADST 141
+ + C ++Q C+R +CRF H PAD
Sbjct: 75 -EFIFCHDFQNKECSRP--NCRFIHGSKEDEDGYKKTGELPPRLRQKVAAGLGLSPAD-- 129
Query: 142 MIDTNDNTVTVCMDYIKGRCSR-EKCKYFH 170
+ V +C D++KG C R KCK+ H
Sbjct: 130 -LPNGKEEVPICRDFLKGDCQRGAKCKFRH 158
>gi|155722994 zinc finger CCCH-type containing 3 [Homo sapiens]
Length = 948
Score = 46.2 bits (108), Expect = 4e-05
Identities = 22/53 (41%), Positives = 26/53 (49%), Gaps = 5/53 (9%)
Query: 18 VCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
VC F RGTC + D C F+H V ++ C LKG CS NC Y H
Sbjct: 699 VCTRFVRGTCKKTDGTCPFSH-----HVSKEKMPVCSYFLKGICSNSNCPYSH 746
Score = 41.6 bits (96), Expect = 9e-04
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 7/69 (10%)
Query: 111 PLQPVVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFH 170
P + VC + RG C + + C F+H + + VC ++KG CS C Y H
Sbjct: 694 PEKVAVCTRFVRGTCKKTDGTCPFSH-------HVSKEKMPVCSYFLKGICSNSNCPYSH 746
Query: 171 PPAHLQAKI 179
+A++
Sbjct: 747 VYVSRKAEV 755
Score = 29.3 bits (64), Expect = 4.5
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 8/56 (14%)
Query: 16 LEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCS-RENCKYLH 70
+ VC F +G CS ++ C ++H S + E C D LKG C CK H
Sbjct: 726 MPVCSYFLKGICS--NSNCPYSHVYVSRKAE-----VCSDFLKGYCPLGAKCKKKH 774
>gi|193788659 cleavage and polyadenylation specific factor 4-like
[Homo sapiens]
Length = 179
Score = 43.5 bits (101), Expect = 2e-04
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 7/73 (9%)
Query: 7 PIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIAC-FDSLKGRCSREN 65
P R + + VC+ + RG C + D CKF H Q + R+ C F S G CS +
Sbjct: 56 PFRHDRGEKMVVCKHWLRGLCKKGD-HCKFLH-----QYDLTRMPECYFYSKFGDCSNKE 109
Query: 66 CKYLHPPPHLKTQ 78
C +LH P K+Q
Sbjct: 110 CSFLHVKPAFKSQ 122
Score = 38.1 bits (87), Expect = 0.010
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 9/57 (15%)
Query: 115 VVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIK-GRCSREKCKYFH 170
VVC+ + RG C +G++ C+F H D T + C Y K G CS ++C + H
Sbjct: 66 VVCKHWLRGLCKKGDH-CKFLHQYDLTRMPE-------CYFYSKFGDCSNKECSFLH 114
>gi|125987603 cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Homo sapiens]
Length = 244
Score = 41.2 bits (95), Expect = 0.001
Identities = 39/167 (23%), Positives = 56/167 (33%), Gaps = 57/167 (34%)
Query: 7 PIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIAC-FDSLKGRCSREN 65
P R VC+ + RG C + D +C+F H + + ++ C F S G CS +
Sbjct: 56 PFRHISGEKTVVCKHWLRGLCKKGD-QCEFLH-----EYDMTKMPECYFYSKFGECSNKE 109
Query: 66 CKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREYQRGNC 125
C +LH P K + C Y RG C
Sbjct: 110 CPFLHIDPESKIK-------------------------------------DCPWYDRGFC 132
Query: 126 NRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSR-EKCKYFHP 171
G CR H +C++Y+ G C CK+ HP
Sbjct: 133 KHGPL-CRHRH-----------TRRVICVNYLVGFCPEGPSCKFMHP 167
>gi|5729939 cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Homo sapiens]
Length = 269
Score = 41.2 bits (95), Expect = 0.001
Identities = 39/167 (23%), Positives = 56/167 (33%), Gaps = 57/167 (34%)
Query: 7 PIRDTKWLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIAC-FDSLKGRCSREN 65
P R VC+ + RG C + D +C+F H + + ++ C F S G CS +
Sbjct: 56 PFRHISGEKTVVCKHWLRGLCKKGD-QCEFLH-----EYDMTKMPECYFYSKFGECSNKE 109
Query: 66 CKYLHPPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREYQRGNC 125
C +LH P K + C Y RG C
Sbjct: 110 CPFLHIDPESKIK-------------------------------------DCPWYDRGFC 132
Query: 126 NRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSR-EKCKYFHP 171
G CR H +C++Y+ G C CK+ HP
Sbjct: 133 KHGPL-CRHRH-----------TRRVICVNYLVGFCPEGPSCKFMHP 167
>gi|223468622 makorin ring finger protein 1 isoform 2 [Homo sapiens]
Length = 329
Score = 38.1 bits (87), Expect = 0.010
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 109 GAPLQPVVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVT-VCMDYIKGRC-SREKC 166
G + V CR + G C G+N CR++H D +D+ + VC + +G C ++C
Sbjct: 53 GGWTKQVTCRYFMHGVCKEGDN-CRYSH-------DLSDSPYSVVCKYFQRGYCIYGDRC 104
Query: 167 KYFHPPAHLQAKIKAAQYQVNQAAAAQAAATA 198
+Y H Q + A + + AA ++ ++
Sbjct: 105 RYEHSKPLKQEEATATELTTKSSLAASSSLSS 136
Score = 29.3 bits (64), Expect = 4.5
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 13 WLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRC-SRENCKYLHP 71
W CR F G C D C+++H ++ + C +G C + C+Y H
Sbjct: 55 WTKQVTCRYFMHGVCKEGD-NCRYSHDLS----DSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Query: 72 PP---HLKTQLEINGRNNLIQQKNMAML 96
P T E+ +++L +++ +
Sbjct: 110 KPLKQEEATATELTTKSSLAASSSLSSI 137
>gi|223468620 makorin ring finger protein 1 isoform 1 [Homo sapiens]
Length = 482
Score = 38.1 bits (87), Expect = 0.010
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 10/92 (10%)
Query: 109 GAPLQPVVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVT-VCMDYIKGRC-SREKC 166
G + V CR + G C G+N CR++H D +D+ + VC + +G C ++C
Sbjct: 53 GGWTKQVTCRYFMHGVCKEGDN-CRYSH-------DLSDSPYSVVCKYFQRGYCIYGDRC 104
Query: 167 KYFHPPAHLQAKIKAAQYQVNQAAAAQAAATA 198
+Y H Q + A + + AA ++ ++
Sbjct: 105 RYEHSKPLKQEEATATELTTKSSLAASSSLSS 136
Score = 29.3 bits (64), Expect = 4.5
Identities = 19/88 (21%), Positives = 36/88 (40%), Gaps = 9/88 (10%)
Query: 13 WLTLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRC-SRENCKYLHP 71
W CR F G C D C+++H ++ + C +G C + C+Y H
Sbjct: 55 WTKQVTCRYFMHGVCKEGD-NCRYSHDLS----DSPYSVVCKYFQRGYCIYGDRCRYEHS 109
Query: 72 PP---HLKTQLEINGRNNLIQQKNMAML 96
P T E+ +++L +++ +
Sbjct: 110 KPLKQEEATATELTTKSSLAASSSLSSI 137
>gi|18087829 zinc finger CCCH-type, antiviral 1-like [Homo sapiens]
Length = 300
Score = 34.3 bits (77), Expect = 0.14
Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 36/173 (20%)
Query: 15 TLEVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLHPPPH 74
++ +C +QRG C D ++ C + G+C +C H
Sbjct: 87 SVRLCARYQRGECQACD-----------------QLHFCRRHMLGKCPNRDCWSTCTLSH 129
Query: 75 LKTQLEINGRNNLIQQKNMAMLA-QQMQLANAMMPGAP-LQPVVCREYQRGNCNRGENDC 132
+I+ N+ K+ + + QL ++ P L P VC Y +G G
Sbjct: 130 -----DIHTPVNMQVLKSHGLFGLNENQLRILLLQNDPCLLPEVCLLYNKGEALYG---- 180
Query: 133 RFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFHPPAHLQAKIKAAQYQ 185
+ + D N VC ++KG C + CK H H A +K Q Q
Sbjct: 181 -YCNLKDKC------NKFHVCKSFVKGECKLQTCKRSHQLIH-AASLKLLQDQ 225
>gi|110347459 MYC-associated zinc finger protein isoform 2 [Homo
sapiens]
Length = 493
Score = 33.9 bits (76), Expect = 0.18
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 22/107 (20%)
Query: 189 AAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTA 248
AAA ++AA AAA A + P PA T A L+Q A
Sbjct: 90 AAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAA-----------------LKQPPA 132
Query: 249 FLPPVPMV-----HGATPATVSAATTSATSVPFAATATANQIPIISA 290
PP P V A PA+ + +A + A T+T P+ SA
Sbjct: 133 PPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASA 179
>gi|110347461 MYC-associated zinc finger protein isoform 1 [Homo
sapiens]
Length = 477
Score = 33.9 bits (76), Expect = 0.18
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 22/107 (20%)
Query: 189 AAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQQALANMQLQQHTA 248
AAA ++AA AAA A + P PA T A L+Q A
Sbjct: 90 AAAQESAAAAAAAAAAAAAVAAAPPAPAAASTVDTAA-----------------LKQPPA 132
Query: 249 FLPPVPMV-----HGATPATVSAATTSATSVPFAATATANQIPIISA 290
PP P V A PA+ + +A + A T+T P+ SA
Sbjct: 133 PPPPPPPVSAPAAEAAPPASAATIAAAAATAVVAPTSTVAVAPVASA 179
>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
sapiens]
Length = 1077
Score = 33.5 bits (75), Expect = 0.24
Identities = 37/122 (30%), Positives = 50/122 (40%), Gaps = 10/122 (8%)
Query: 173 AHLQAKIKA-AQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGI 231
A +QA+ +A AQ Q A AQA A A A QA + A +
Sbjct: 181 AQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ 240
Query: 232 FQYQ-QALANMQLQQHTAFLP----PVPMVH----GATPATVSAATTSATSVPFAATATA 282
Q Q Q A +Q Q A P P P V +TP++ ++ TT+ATSV +
Sbjct: 241 AQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPT 300
Query: 283 NQ 284
Q
Sbjct: 301 TQ 302
Score = 32.3 bits (72), Expect = 0.53
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Query: 181 AAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQ---QA 237
AAQ QV A AQA A A A QA + A + Q Q QA
Sbjct: 178 AAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 237
Query: 238 LANMQLQQHTAFLPPVPMVHGATPATVSAA----TTSATSVPFAATAT 281
A Q+Q V +TP T S A T++++S P + T+T
Sbjct: 238 QAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTST 285
>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
sapiens]
Length = 1098
Score = 33.5 bits (75), Expect = 0.24
Identities = 37/122 (30%), Positives = 50/122 (40%), Gaps = 10/122 (8%)
Query: 173 AHLQAKIKA-AQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGI 231
A +QA+ +A AQ Q A AQA A A A QA + A +
Sbjct: 181 AQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQ 240
Query: 232 FQYQ-QALANMQLQQHTAFLP----PVPMVH----GATPATVSAATTSATSVPFAATATA 282
Q Q Q A +Q Q A P P P V +TP++ ++ TT+ATSV +
Sbjct: 241 AQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTATSVAQTVSTPT 300
Query: 283 NQ 284
Q
Sbjct: 301 TQ 302
Score = 32.3 bits (72), Expect = 0.53
Identities = 33/108 (30%), Positives = 43/108 (39%), Gaps = 7/108 (6%)
Query: 181 AAQYQVNQAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFNTGIFQYQ---QA 237
AAQ QV A AQA A A A QA + A + Q Q QA
Sbjct: 178 AAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 237
Query: 238 LANMQLQQHTAFLPPVPMVHGATPATVSAA----TTSATSVPFAATAT 281
A Q+Q V +TP T S A T++++S P + T+T
Sbjct: 238 QAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTST 285
>gi|46094081 development and differentiation enhancing factor 1
[Homo sapiens]
Length = 1129
Score = 33.1 bits (74), Expect = 0.31
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Query: 188 QAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGAT---AVFNTGIFQYQQALANMQLQ 244
+ + Q++ ++A + VLP LP++ AL KT+ + A IFQ LA + +
Sbjct: 874 EGLSQQSSTSSAKTALGPRVLPKLPQKVALRKTDHLSLDKATIPPEIFQKSSQLAELPQK 933
Query: 245 QHTAFLPPVP 254
LPP P
Sbjct: 934 PPPGDLPPKP 943
>gi|114842410 zinc finger CCCH-type containing 11A [Homo sapiens]
Length = 810
Score = 33.1 bits (74), Expect = 0.31
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 5/54 (9%)
Query: 17 EVCREFQRGTCSRPDTECKFAHPSKSCQVENGRVIACFDSLKGRCSRENCKYLH 70
E C F TC++ D+ C F H C+ G C +GRC R+ C++ H
Sbjct: 6 EDCYFFFYSTCTKGDS-CPFRH----CEAAIGNETVCTLWQEGRCFRQVCRFRH 54
Score = 29.3 bits (64), Expect = 4.5
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 7/60 (11%)
Query: 111 PLQPVVCREYQRGNCNRGENDCRFAHPADSTMIDTNDNTVTVCMDYIKGRCSREKCKYFH 170
P Q C + C +G++ C F H + TVC + +GRC R+ C++ H
Sbjct: 2 PNQGEDCYFFFYSTCTKGDS-CPFRH------CEAAIGNETVCTLWQEGRCFRQVCRFRH 54
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 32.7 bits (73), Expect = 0.40
Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 171 PPAHLQAKIKAAQYQVN--QAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFN 228
P A A KAA+Y V AAAA+AAA AA G+ +P + P + G
Sbjct: 444 PEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGL----VPGVGVAPGVGVAPGVGVAPG 499
Query: 229 TGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATA 282
G+ + + P V + G P V+AA SA V A A
Sbjct: 500 VGL------APGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRA 547
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 32.7 bits (73), Expect = 0.40
Identities = 34/114 (29%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 171 PPAHLQAKIKAAQYQVN--QAAAAQAAATAAAMGIPQAVLPPLPKRPALEKTNGATAVFN 228
P A A KAA+Y V AAAA+AAA AA G+ +P + P + G
Sbjct: 439 PEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQFGL----VPGVGVAPGVGVAPGVGVAPG 494
Query: 229 TGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPFAATATA 282
G+ + + P V + G P V+AA SA V A A
Sbjct: 495 VGL------APGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKAQLRA 542
>gi|15812180 butyrate response factor 1 [Homo sapiens]
Length = 338
Score = 31.6 bits (70), Expect = 0.90
Identities = 38/159 (23%), Positives = 63/159 (39%), Gaps = 23/159 (14%)
Query: 71 PPPHLKTQLEINGRNNLIQQKNMAMLAQQMQLANAMMPGAPLQPVVCREYQR-GNCNRGE 129
P P L ++ + R+ + +L Q Q + + + +CR ++ G C G+
Sbjct: 75 PAPALSSR-DSRFRDRSFSEGGERLLPTQKQPGGGQVNSSRYKTELCRPFEENGACKYGD 133
Query: 130 NDCRFA-----------HPADSTMIDTNDNTVTVCMDYIKGRC----SREKCKYFHPPAH 174
C+FA HP T + +T+ C RC + E+ +
Sbjct: 134 K-CQFAHGIHELRSLTRHPKYKTELCRTFHTIGFCP--YGPRCHFIHNAEERRALAGARD 190
Query: 175 LQAKIKAAQYQVNQAAAAQAAATAAAMGI---PQAVLPP 210
L A Q+ + A AAATAAA G+ P ++ PP
Sbjct: 191 LSADRPRLQHSFSFAGFPSAAATAAATGLLDSPTSITPP 229
>gi|169217460 PREDICTED: similar to Mucin-6, partial [Homo sapiens]
Length = 350
Score = 31.6 bits (70), Expect = 0.90
Identities = 29/126 (23%), Positives = 46/126 (36%), Gaps = 20/126 (15%)
Query: 170 HPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQAVLPPL-------------PKRPA 216
H P + + + + V AQ A +A+ P +PPL P P
Sbjct: 22 HVPPFSTSLVTPSTHTVITPTHAQMATSASIHSTPTGTIPPLTTLMNTGSTHTAPPVTPT 81
Query: 217 LEKTNGATAVFNTGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTSATSVPF 276
T+ A + F+T A + L HT+ + AT + T+ +S P
Sbjct: 82 TSGTSQAASSFST-------AKTSTSLHSHTSSTHHPEVTPTATTKITTNPTSIGSSTPM 134
Query: 277 AATATA 282
A T +A
Sbjct: 135 AHTTSA 140
>gi|148833513 RNA binding motif protein 47 isoform a [Homo sapiens]
Length = 593
Score = 31.2 bits (69), Expect = 1.2
Identities = 34/123 (27%), Positives = 45/123 (36%), Gaps = 12/123 (9%)
Query: 170 HPPAHLQAKIKAAQYQVNQAAAAQAAATAAAMGIPQ-AVLPPLPKRPALEKTNGATAVFN 228
H H+ + I + AAAA AAA AAA IP + PP RP T V+
Sbjct: 471 HTVEHMISPIAVQPDPASAAAAAAAAAAAAAAVIPTVSTPPPFQGRP-------ITPVYT 523
Query: 229 TGIFQYQQALANMQLQQHTAFLPPVPMVHGATPATVSAATTS----ATSVPFAATATANQ 284
+ A + + F P +AA A +P A A A Q
Sbjct: 524 VAPNVQRIPTAGIYGASYVPFAAPATATIATLQKNAAAAAAMYGGYAGYIPQAFPAAAIQ 583
Query: 285 IPI 287
+PI
Sbjct: 584 VPI 586
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.128 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,490,004
Number of Sequences: 37866
Number of extensions: 544961
Number of successful extensions: 2670
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 2358
Number of HSP's gapped (non-prelim): 267
length of query: 302
length of database: 18,247,518
effective HSP length: 102
effective length of query: 200
effective length of database: 14,385,186
effective search space: 2877037200
effective search space used: 2877037200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.