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Search of human proteins with 46409442
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46409442 hypothetical protein LOC389197 [Homo sapiens]
(276 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46409442 hypothetical protein LOC389197 [Homo sapiens] 543 e-155
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 39 0.006
gi|23097308 spectrin repeat containing, nuclear envelope 1 isofo... 39 0.006
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 39 0.006
gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens] 39 0.006
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 37 0.014
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 37 0.014
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 37 0.014
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 37 0.014
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 37 0.014
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 37 0.014
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 37 0.014
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 37 0.014
gi|169204908 PREDICTED: similar to Thyroid hormone receptor inte... 36 0.032
gi|169205597 PREDICTED: similar to Thyroid hormone receptor inte... 36 0.032
gi|169203883 PREDICTED: hypothetical protein [Homo sapiens] 36 0.032
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens] 36 0.032
gi|217330634 serine/threonine kinase 36 [Homo sapiens] 35 0.055
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 35 0.071
gi|45446749 kinesin family member 5A [Homo sapiens] 35 0.071
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 35 0.071
gi|149363664 septin 8 isoform d [Homo sapiens] 35 0.071
gi|149363638 septin 8 isoform c [Homo sapiens] 35 0.071
gi|149363689 septin 8 isoform a [Homo sapiens] 35 0.071
gi|149363661 septin 8 isoform b [Homo sapiens] 35 0.071
gi|24308303 SH3-binding domain protein 5-like [Homo sapiens] 35 0.071
gi|239787092 A20-binding inhibitor of NF-kappaB activation 2 iso... 34 0.12
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 34 0.12
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 34 0.12
gi|32698688 citron [Homo sapiens] 34 0.12
>gi|46409442 hypothetical protein LOC389197 [Homo sapiens]
Length = 276
Score = 543 bits (1398), Expect = e-155
Identities = 276/276 (100%), Positives = 276/276 (100%)
Query: 1 MLRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
MLRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL
Sbjct: 1 MLRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
Query: 61 QKKQHEAKLAVTPLKAKIASLVRKCRERNRLITHLLQELHRHGLGNLLLSELAQNMLNDV 120
QKKQHEAKLAVTPLKAKIASLVRKCRERNRLITHLLQELHRHGLGNLLLSELAQNMLNDV
Sbjct: 61 QKKQHEAKLAVTPLKAKIASLVRKCRERNRLITHLLQELHRHGLGNLLLSELAQNMLNDV 120
Query: 121 ALAEYTATFLAPGVPETSHHLDVKSEMTAALRAQTYLLNPEMDSVLQSSLSSESWPIPEP 180
ALAEYTATFLAPGVPETSHHLDVKSEMTAALRAQTYLLNPEMDSVLQSSLSSESWPIPEP
Sbjct: 121 ALAEYTATFLAPGVPETSHHLDVKSEMTAALRAQTYLLNPEMDSVLQSSLSSESWPIPEP 180
Query: 181 EWPAQTAQLDSLKLPLSLVSTLDPGTCLAAVTVEPGLPAQRLQEKGGMPCPALQVDNVPA 240
EWPAQTAQLDSLKLPLSLVSTLDPGTCLAAVTVEPGLPAQRLQEKGGMPCPALQVDNVPA
Sbjct: 181 EWPAQTAQLDSLKLPLSLVSTLDPGTCLAAVTVEPGLPAQRLQEKGGMPCPALQVDNVPA 240
Query: 241 PSELLSPARILAFHQELRQSICSNSQVHKSPLELEM 276
PSELLSPARILAFHQELRQSICSNSQVHKSPLELEM
Sbjct: 241 PSELLSPARILAFHQELRQSICSNSQVHKSPLELEM 276
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform
4 [Homo sapiens]
Length = 3321
Score = 38.5 bits (88), Expect = 0.006
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 31 QLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAVTPLKAKIASLVRKCRERNR 90
QLR+Q HQ L+E+ + EL+A E+LQ + + ++A L R+ E +
Sbjct: 85 QLREQYILHQTLLEESKEIDSELEAMTEKLQ--YLTSVYCTEKMSQQVAELGRETEELRQ 142
Query: 91 LITHLLQELHRHGLGNLLLSELAQNMLNDVALAEYTATFLAPGVPETSHHLDVKSEMTAA 150
+I LQ L Q+ D+ E ++K A
Sbjct: 143 MIKIRLQNL--------------QDAAKDMKKFE----------------AELKKLQAAL 172
Query: 151 LRAQTYLLNPEMDSV-LQSSLSSESWPIPEPEW---PAQTAQL--DSLKLPLSLVSTLDP 204
+AQ L +PE+ + L+ LS + E E Q QL +L++P +V++L
Sbjct: 173 EQAQATLTSPEVGRLSLKEQLSHRQHLLSEMESLKPKVQAVQLCQSALRIPEDVVASLP- 231
Query: 205 GTCLAAVTVEPGLPAQRLQEKGGMPCPALQ 234
C AA+ ++ A RLQ C +Q
Sbjct: 232 -LCHAALRLQE--EASRLQHTAIQQCNIMQ 258
Score = 29.6 bits (65), Expect = 3.0
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 32 LRDQG-------AAHQASLDEATRLQEELQAKLEELQKKQHEAKLAVTPLKAKIASLVRK 84
LR QG A Q L + + LQA+L E+Q+K A + + K K+A L++
Sbjct: 2139 LRQQGSYILTVEAGKQLLLSADSGAEAALQAELAEIQEKWKSASMRLEEQKKKLAFLLKD 2198
Query: 85 CRERNRLITHLLQEL 99
+ + I L++L
Sbjct: 2199 WEKCEKGIADSLEKL 2213
>gi|23097308 spectrin repeat containing, nuclear envelope 1 isoform 2
[Homo sapiens]
Length = 8749
Score = 38.5 bits (88), Expect = 0.006
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 31 QLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAVTPLKAKIASLVRKCRERNR 90
QLR+Q HQ L+E+ + EL+A E+LQ + + ++A L R+ E +
Sbjct: 5490 QLREQYILHQTLLEESKEIDSELEAMTEKLQ--YLTSVYCTEKMSQQVAELGRETEELRQ 5547
Query: 91 LITHLLQELHRHGLGNLLLSELAQNMLNDVALAEYTATFLAPGVPETSHHLDVKSEMTAA 150
+I LQ L Q+ D+ E ++K A
Sbjct: 5548 MIKIRLQNL--------------QDAAKDMKKFE----------------AELKKLQAAL 5577
Query: 151 LRAQTYLLNPEMDSV-LQSSLSSESWPIPEPEW---PAQTAQL--DSLKLPLSLVSTLDP 204
+AQ L +PE+ + L+ LS + E E Q QL +L++P +V++L
Sbjct: 5578 EQAQATLTSPEVGRLSLKEQLSHRQHLLSEMESLKPKVQAVQLCQSALRIPEDVVASLP- 5636
Query: 205 GTCLAAVTVEPGLPAQRLQEKGGMPCPALQ 234
C AA+ ++ A RLQ C +Q
Sbjct: 5637 -LCHAALRLQE--EASRLQHTAIQQCNIMQ 5663
Score = 29.6 bits (65), Expect = 3.0
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 32 LRDQG-------AAHQASLDEATRLQEELQAKLEELQKKQHEAKLAVTPLKAKIASLVRK 84
LR QG A Q L + + LQA+L E+Q+K A + + K K+A L++
Sbjct: 7544 LRQQGSYILTVEAGKQLLLSADSGAEAALQAELAEIQEKWKSASMRLEEQKKKLAFLLKD 7603
Query: 85 CRERNRLITHLLQEL 99
+ + I L++L
Sbjct: 7604 WEKCEKGIADSLEKL 7618
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 38.5 bits (88), Expect = 0.006
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 42/210 (20%)
Query: 31 QLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAVTPLKAKIASLVRKCRERNR 90
QLR+Q HQ L+E+ + EL+A E+LQ + + ++A L R+ E +
Sbjct: 5561 QLREQYILHQTLLEESKEIDSELEAMTEKLQ--YLTSVYCTEKMSQQVAELGRETEELRQ 5618
Query: 91 LITHLLQELHRHGLGNLLLSELAQNMLNDVALAEYTATFLAPGVPETSHHLDVKSEMTAA 150
+I LQ L Q+ D+ E ++K A
Sbjct: 5619 MIKIRLQNL--------------QDAAKDMKKFE----------------AELKKLQAAL 5648
Query: 151 LRAQTYLLNPEMDSV-LQSSLSSESWPIPEPEW---PAQTAQL--DSLKLPLSLVSTLDP 204
+AQ L +PE+ + L+ LS + E E Q QL +L++P +V++L
Sbjct: 5649 EQAQATLTSPEVGRLSLKEQLSHRQHLLSEMESLKPKVQAVQLCQSALRIPEDVVASLP- 5707
Query: 205 GTCLAAVTVEPGLPAQRLQEKGGMPCPALQ 234
C AA+ ++ A RLQ C +Q
Sbjct: 5708 -LCHAALRLQE--EASRLQHTAIQQCNIMQ 5734
Score = 29.6 bits (65), Expect = 3.0
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 32 LRDQG-------AAHQASLDEATRLQEELQAKLEELQKKQHEAKLAVTPLKAKIASLVRK 84
LR QG A Q L + + LQA+L E+Q+K A + + K K+A L++
Sbjct: 7615 LRQQGSYILTVEAGKQLLLSADSGAEAALQAELAEIQEKWKSASMRLEEQKKKLAFLLKD 7674
Query: 85 CRERNRLITHLLQEL 99
+ + I L++L
Sbjct: 7675 WEKCEKGIADSLEKL 7689
>gi|71361682 nuclear mitotic apparatus protein 1 [Homo sapiens]
Length = 2115
Score = 38.5 bits (88), Expect = 0.006
Identities = 27/98 (27%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 2 LRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGA-AHQASLDEATRLQEELQAKLEEL 60
LR+ +A + + + + + +L Q Q+ ++ + Q S+ +A R + EL K+EEL
Sbjct: 596 LRERDAALKQLEALEKEKAAKLEILQQQLQVANEARDSAQTSVTQAQREKAELSRKVEEL 655
Query: 61 Q-------KKQHEAKLAVTPLKAKIASLVRKCRERNRL 91
Q ++QHEA+ V L+ ++ S +K E+ R+
Sbjct: 656 QACVETARQEQHEAQAQVAELELQLRSEQQKATEKERV 693
Score = 30.0 bits (66), Expect = 2.3
Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 18 AQQLHHRVLTLQCQL--RDQGAAH------------QASLDEATRLQEELQAKLEELQKK 63
AQ+L ++ LQ QL ++Q A H A + LQE+L++ LE+LQK+
Sbjct: 1586 AQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQEQLRS-LEQLQKE 1644
Query: 64 QHEAKLAVTPLKAKIASLVRKCRERNRLITHLLQEL 99
E + L ++ K +E + HL ++
Sbjct: 1645 NKELRAEAERLGHELQQAGLKTKEAEQTCRHLTAQV 1680
Score = 28.9 bits (63), Expect = 5.1
Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 24/173 (13%)
Query: 2 LRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQ 61
L ++ +TE+D ++ Q L L L ++ AA E EEL+ K E L
Sbjct: 237 LAENRKLLTEKDAQIAMMQQRIDRLAL---LNEKQAASPLEPKEL----EELRDKNESLT 289
Query: 62 KKQHEAKLAVTPLKAKIASLVRKCR---ERNRLITHLLQELHRHGLGNLLLSELAQNMLN 118
+ HE LK + + + RK E N ++ L+E H L +L Q+ LN
Sbjct: 290 MRLHETLKQCQDLKTEKSQMDRKINQLSEENGDLSFKLREFASH------LQQL-QDALN 342
Query: 119 DVALAEYTATFLAPGVPETSHHLDVKSEMTAALRAQTYLLNPEMDSVLQSSLS 171
++ AT ++ E++AAL+ + L E + +LQ LS
Sbjct: 343 ELTEEHSKAT-----QEWLEKQAQLEKELSAALQDKKCL--EEKNEILQGKLS 388
Score = 28.1 bits (61), Expect = 8.7
Identities = 46/198 (23%), Positives = 86/198 (43%), Gaps = 19/198 (9%)
Query: 38 AHQASLDEATRLQEELQAKLEELQKKQHEAKLAVTPLK---AKIASLVRKCRERNRLITH 94
A QA E+ + + LQA+L ELQ + + + A K K + +++N+ +
Sbjct: 1574 AVQAQGGESQQEAQRLQAQLNELQAQLSQKEQAAEHYKLQMEKAKTHYDAKKQQNQELQE 1633
Query: 95 LLQELHRHGLGNLLLSELAQNMLNDVALAEYTATFLAPGVPETSHHLDVKSEMTAALRAQ 154
L+ L + N L A+ + +++ A +T HL + +L AQ
Sbjct: 1634 QLRSLEQLQKENKELRAEAERLGHEL----QQAGLKTKEAEQTCRHL---TAQVRSLEAQ 1686
Query: 155 TYLLNPEMDSVLQSSLSSESWPIPEPE-WPAQTAQLDSLKL------PLSLVSTLDPGTC 207
+ ++ + + +++++ EP+ P +DSL L PLS+ S L P T
Sbjct: 1687 VAHADQQLRDLGKFQVATDALKSREPQAKPQLDLSIDSLDLSCEEGTPLSITSKL-PRTQ 1745
Query: 208 LAAVTVEPGLPAQRLQEK 225
+V PG PA + ++
Sbjct: 1746 PDGTSV-PGEPASPISQR 1762
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 37.4 bits (85), Expect = 0.014
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 12 EDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAV 71
E + + +QL + QLR++ Q +++ ++ L A +EE +++QHEA+ V
Sbjct: 2510 EQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQE---RQRLVASMEEARRRQHEAEEGV 2566
Query: 72 TPLKAKIASLVRKCRERNRLIT----------HLLQELHRHGLGN 106
+ ++ L ++ R++ L+ LL+E HR L +
Sbjct: 2567 RRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRAALAH 2611
Score = 28.1 bits (61), Expect = 8.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 11 EEDPRLRAQQL---HHRVLTLQCQLRDQ---GAAHQASLDEATRLQEELQAKLEELQKKQ 64
EE+ RL QQ R+ ++ L Q AH + +A R +ELQ +++E ++
Sbjct: 1345 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1404
Query: 65 HEAKLAVTPLKAKIASLVRKCRE 87
EA + K I +++ R+
Sbjct: 1405 EEAAVDAQQQKRSIQEELQQLRQ 1427
Score = 28.1 bits (61), Expect = 8.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 2 LRDSEAEVTEEDPRL-RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
L+ A E+ +L R+ Q H + QLR++ EA R +EE + +LE
Sbjct: 1578 LQSKRASFAEKTAQLERSLQEEHVAVA---QLREEAERRAQQQAEAERAREEAERELERW 1634
Query: 61 QKKQHEA 67
Q K +EA
Sbjct: 1635 QLKANEA 1641
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 37.4 bits (85), Expect = 0.014
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 12 EDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAV 71
E + + +QL + QLR++ Q +++ ++ L A +EE +++QHEA+ V
Sbjct: 2514 EQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQE---RQRLVASMEEARRRQHEAEEGV 2570
Query: 72 TPLKAKIASLVRKCRERNRLIT----------HLLQELHRHGLGN 106
+ ++ L ++ R++ L+ LL+E HR L +
Sbjct: 2571 RRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRAALAH 2615
Score = 28.1 bits (61), Expect = 8.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 11 EEDPRLRAQQL---HHRVLTLQCQLRDQ---GAAHQASLDEATRLQEELQAKLEELQKKQ 64
EE+ RL QQ R+ ++ L Q AH + +A R +ELQ +++E ++
Sbjct: 1349 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1408
Query: 65 HEAKLAVTPLKAKIASLVRKCRE 87
EA + K I +++ R+
Sbjct: 1409 EEAAVDAQQQKRSIQEELQQLRQ 1431
Score = 28.1 bits (61), Expect = 8.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 2 LRDSEAEVTEEDPRL-RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
L+ A E+ +L R+ Q H + QLR++ EA R +EE + +LE
Sbjct: 1582 LQSKRASFAEKTAQLERSLQEEHVAVA---QLREEAERRAQQQAEAERAREEAERELERW 1638
Query: 61 QKKQHEA 67
Q K +EA
Sbjct: 1639 QLKANEA 1645
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 37.4 bits (85), Expect = 0.014
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 12 EDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAV 71
E + + +QL + QLR++ Q +++ ++ L A +EE +++QHEA+ V
Sbjct: 2510 EQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQE---RQRLVASMEEARRRQHEAEEGV 2566
Query: 72 TPLKAKIASLVRKCRERNRLIT----------HLLQELHRHGLGN 106
+ ++ L ++ R++ L+ LL+E HR L +
Sbjct: 2567 RRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRAALAH 2611
Score = 28.1 bits (61), Expect = 8.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 11 EEDPRLRAQQL---HHRVLTLQCQLRDQ---GAAHQASLDEATRLQEELQAKLEELQKKQ 64
EE+ RL QQ R+ ++ L Q AH + +A R +ELQ +++E ++
Sbjct: 1345 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1404
Query: 65 HEAKLAVTPLKAKIASLVRKCRE 87
EA + K I +++ R+
Sbjct: 1405 EEAAVDAQQQKRSIQEELQQLRQ 1427
Score = 28.1 bits (61), Expect = 8.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 2 LRDSEAEVTEEDPRL-RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
L+ A E+ +L R+ Q H + QLR++ EA R +EE + +LE
Sbjct: 1578 LQSKRASFAEKTAQLERSLQEEHVAVA---QLREEAERRAQQQAEAERAREEAERELERW 1634
Query: 61 QKKQHEA 67
Q K +EA
Sbjct: 1635 QLKANEA 1641
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 37.4 bits (85), Expect = 0.014
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 12 EDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAV 71
E + + +QL + QLR++ Q +++ ++ L A +EE +++QHEA+ V
Sbjct: 2478 EQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQE---RQRLVASMEEARRRQHEAEEGV 2534
Query: 72 TPLKAKIASLVRKCRERNRLIT----------HLLQELHRHGLGN 106
+ ++ L ++ R++ L+ LL+E HR L +
Sbjct: 2535 RRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRAALAH 2579
Score = 28.1 bits (61), Expect = 8.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 11 EEDPRLRAQQL---HHRVLTLQCQLRDQ---GAAHQASLDEATRLQEELQAKLEELQKKQ 64
EE+ RL QQ R+ ++ L Q AH + +A R +ELQ +++E ++
Sbjct: 1313 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1372
Query: 65 HEAKLAVTPLKAKIASLVRKCRE 87
EA + K I +++ R+
Sbjct: 1373 EEAAVDAQQQKRSIQEELQQLRQ 1395
Score = 28.1 bits (61), Expect = 8.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 2 LRDSEAEVTEEDPRL-RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
L+ A E+ +L R+ Q H + QLR++ EA R +EE + +LE
Sbjct: 1546 LQSKRASFAEKTAQLERSLQEEHVAVA---QLREEAERRAQQQAEAERAREEAERELERW 1602
Query: 61 QKKQHEA 67
Q K +EA
Sbjct: 1603 QLKANEA 1609
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 37.4 bits (85), Expect = 0.014
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 12 EDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAV 71
E + + +QL + QLR++ Q +++ ++ L A +EE +++QHEA+ V
Sbjct: 2647 EQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQE---RQRLVASMEEARRRQHEAEEGV 2703
Query: 72 TPLKAKIASLVRKCRERNRLIT----------HLLQELHRHGLGN 106
+ ++ L ++ R++ L+ LL+E HR L +
Sbjct: 2704 RRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRAALAH 2748
Score = 28.1 bits (61), Expect = 8.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 11 EEDPRLRAQQL---HHRVLTLQCQLRDQ---GAAHQASLDEATRLQEELQAKLEELQKKQ 64
EE+ RL QQ R+ ++ L Q AH + +A R +ELQ +++E ++
Sbjct: 1482 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1541
Query: 65 HEAKLAVTPLKAKIASLVRKCRE 87
EA + K I +++ R+
Sbjct: 1542 EEAAVDAQQQKRSIQEELQQLRQ 1564
Score = 28.1 bits (61), Expect = 8.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 2 LRDSEAEVTEEDPRL-RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
L+ A E+ +L R+ Q H + QLR++ EA R +EE + +LE
Sbjct: 1715 LQSKRASFAEKTAQLERSLQEEHVAVA---QLREEAERRAQQQAEAERAREEAERELERW 1771
Query: 61 QKKQHEA 67
Q K +EA
Sbjct: 1772 QLKANEA 1778
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 37.4 bits (85), Expect = 0.014
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 12 EDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAV 71
E + + +QL + QLR++ Q +++ ++ L A +EE +++QHEA+ V
Sbjct: 2488 EQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQE---RQRLVASMEEARRRQHEAEEGV 2544
Query: 72 TPLKAKIASLVRKCRERNRLIT----------HLLQELHRHGLGN 106
+ ++ L ++ R++ L+ LL+E HR L +
Sbjct: 2545 RRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRAALAH 2589
Score = 28.1 bits (61), Expect = 8.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 11 EEDPRLRAQQL---HHRVLTLQCQLRDQ---GAAHQASLDEATRLQEELQAKLEELQKKQ 64
EE+ RL QQ R+ ++ L Q AH + +A R +ELQ +++E ++
Sbjct: 1323 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1382
Query: 65 HEAKLAVTPLKAKIASLVRKCRE 87
EA + K I +++ R+
Sbjct: 1383 EEAAVDAQQQKRSIQEELQQLRQ 1405
Score = 28.1 bits (61), Expect = 8.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 2 LRDSEAEVTEEDPRL-RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
L+ A E+ +L R+ Q H + QLR++ EA R +EE + +LE
Sbjct: 1556 LQSKRASFAEKTAQLERSLQEEHVAVA---QLREEAERRAQQQAEAERAREEAERELERW 1612
Query: 61 QKKQHEA 67
Q K +EA
Sbjct: 1613 QLKANEA 1619
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 37.4 bits (85), Expect = 0.014
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 12 EDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAV 71
E + + +QL + QLR++ Q +++ ++ L A +EE +++QHEA+ V
Sbjct: 2496 EQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQE---RQRLVASMEEARRRQHEAEEGV 2552
Query: 72 TPLKAKIASLVRKCRERNRLIT----------HLLQELHRHGLGN 106
+ ++ L ++ R++ L+ LL+E HR L +
Sbjct: 2553 RRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRAALAH 2597
Score = 28.1 bits (61), Expect = 8.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 11 EEDPRLRAQQL---HHRVLTLQCQLRDQ---GAAHQASLDEATRLQEELQAKLEELQKKQ 64
EE+ RL QQ R+ ++ L Q AH + +A R +ELQ +++E ++
Sbjct: 1331 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1390
Query: 65 HEAKLAVTPLKAKIASLVRKCRE 87
EA + K I +++ R+
Sbjct: 1391 EEAAVDAQQQKRSIQEELQQLRQ 1413
Score = 28.1 bits (61), Expect = 8.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 2 LRDSEAEVTEEDPRL-RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
L+ A E+ +L R+ Q H + QLR++ EA R +EE + +LE
Sbjct: 1564 LQSKRASFAEKTAQLERSLQEEHVAVA---QLREEAERRAQQQAEAERAREEAERELERW 1620
Query: 61 QKKQHEA 67
Q K +EA
Sbjct: 1621 QLKANEA 1627
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 37.4 bits (85), Expect = 0.014
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 13/105 (12%)
Query: 12 EDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAV 71
E + + +QL + QLR++ Q +++ ++ L A +EE +++QHEA+ V
Sbjct: 2537 EQEKAKLEQLFQDEVAKAQQLREEQQRQQQQMEQE---RQRLVASMEEARRRQHEAEEGV 2593
Query: 72 TPLKAKIASLVRKCRERNRLIT----------HLLQELHRHGLGN 106
+ ++ L ++ R++ L+ LL+E HR L +
Sbjct: 2594 RRKQEELQQLEQQRRQQEELLAEENQRLREQLQLLEEQHRAALAH 2638
Score = 28.1 bits (61), Expect = 8.7
Identities = 22/83 (26%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 11 EEDPRLRAQQL---HHRVLTLQCQLRDQ---GAAHQASLDEATRLQEELQAKLEELQKKQ 64
EE+ RL QQ R+ ++ L Q AH + +A R +ELQ +++E ++
Sbjct: 1372 EEEERLAEQQRAEERERLAEVEAALEKQRQLAEAHAQAKAQAEREAKELQQRMQEEVVRR 1431
Query: 65 HEAKLAVTPLKAKIASLVRKCRE 87
EA + K I +++ R+
Sbjct: 1432 EEAAVDAQQQKRSIQEELQQLRQ 1454
Score = 28.1 bits (61), Expect = 8.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 2 LRDSEAEVTEEDPRL-RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEEL 60
L+ A E+ +L R+ Q H + QLR++ EA R +EE + +LE
Sbjct: 1605 LQSKRASFAEKTAQLERSLQEEHVAVA---QLREEAERRAQQQAEAERAREEAERELERW 1661
Query: 61 QKKQHEA 67
Q K +EA
Sbjct: 1662 QLKANEA 1668
>gi|169204908 PREDICTED: similar to Thyroid hormone receptor
interactor 11 [Homo sapiens]
Length = 352
Score = 36.2 bits (82), Expect = 0.032
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 17 RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAK---LEELQKKQHEAKLAVTP 73
+A+ L +V++LQ +L + AA LD A+RL E+L K +EEL+K+ + +
Sbjct: 81 KAESLERKVISLQERLDEADAA----LDSASRLTEQLDLKEEQIEELKKQNEFQQEMLDD 136
Query: 74 LKAKIASL-------VRKCRERNRLITHL-LQELHRHGLGNLLLSEL 112
++ K+ +L V K RN I+H + + RH + L+ S L
Sbjct: 137 VQKKLVNLANSLEGKVDKVLMRNLFISHFHMPKNQRHEVLRLMGSIL 183
>gi|169205597 PREDICTED: similar to Thyroid hormone receptor
interactor 11 [Homo sapiens]
Length = 352
Score = 36.2 bits (82), Expect = 0.032
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 17 RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAK---LEELQKKQHEAKLAVTP 73
+A+ L +V++LQ +L + AA LD A+RL E+L K +EEL+K+ + +
Sbjct: 81 KAESLERKVISLQERLDEADAA----LDSASRLTEQLDLKEEQIEELKKQNEFQQEMLDD 136
Query: 74 LKAKIASL-------VRKCRERNRLITHL-LQELHRHGLGNLLLSEL 112
++ K+ +L V K RN I+H + + RH + L+ S L
Sbjct: 137 VQKKLVNLANSLEGKVDKVLMRNLFISHFHMPKNQRHEVLRLMGSIL 183
>gi|169203883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 352
Score = 36.2 bits (82), Expect = 0.032
Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 15/107 (14%)
Query: 17 RAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAK---LEELQKKQHEAKLAVTP 73
+A+ L +V++LQ +L + AA LD A+RL E+L K +EEL+K+ + +
Sbjct: 81 KAESLERKVISLQERLDEADAA----LDSASRLTEQLDLKEEQIEELKKQNEFQQEMLDD 136
Query: 74 LKAKIASL-------VRKCRERNRLITHL-LQELHRHGLGNLLLSEL 112
++ K+ +L V K RN I+H + + RH + L+ S L
Sbjct: 137 VQKKLVNLANSLEGKVDKVLMRNLFISHFHMPKNQRHEVLRLMGSIL 183
>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
Length = 2017
Score = 36.2 bits (82), Expect = 0.032
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 13 DPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAVT 72
D L AQ+L Q LR+Q AAH+ L RLQ E +A EL+ ++ + + +
Sbjct: 965 DKELMAQKLVQAEREAQASLREQRAAHEEDLQ---RLQREKEAAWRELEAERAQLQ---S 1018
Query: 73 PLKAKIASLVRKCRERNRLITHLLQELHRHGLGNLLLSELAQNMLNDVALAEYTATFLAP 132
L+ + L+ + ++ + L + LLL+E + ++L E T L+
Sbjct: 1019 QLQREQEELLARLEAEKEELSEEIAALQQERDEGLLLAESEKQQA--LSLKESEKTALSE 1076
Query: 133 GVPETSHHL-DVKSEMTAALR-AQTYLLNPEMDSVLQSSLSSE 173
+ T H L + EM R AQ+ E D ++L+SE
Sbjct: 1077 KLMGTRHSLATISLEMERQKRDAQS---RQEQDRSTVNALTSE 1116
Score = 28.1 bits (61), Expect = 8.7
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Query: 3 RDSEAEVT---EEDPRLRAQQLHHRVLT--LQCQLRDQGAAHQASLD-------EATRLQ 50
R +E E T EE RL +L V L+ LR A +A E ++LQ
Sbjct: 774 RQAEQEATVAREEQERLEELRLEQEVARQGLEGSLRVAEQAQEALEQQLPTLRHERSQLQ 833
Query: 51 EELQAKLEELQKKQHEAKLAVTPLKAKIASLVRKCRERNRL 91
E+L +L ++ E + A + ++ +L R RE+ L
Sbjct: 834 EQLAQLSRQLSGREQELEQARREAQRQVEALERAAREKEAL 874
>gi|217330634 serine/threonine kinase 36 [Homo sapiens]
Length = 1315
Score = 35.4 bits (80), Expect = 0.055
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 145 SEMTAAL--RAQTYLLNPEMDSVLQSSLSSESWPIPEPEWPAQTAQLDSLKLPLSLVS-T 201
SEM L R L PE S + LS S P PEP+W + Q + L L++ + T
Sbjct: 875 SEMWTVLWHRFSMVLRLPEEASAQEGELSLSSPPSPEPDWTLISPQGMAALLSLAMATFT 934
Query: 202 LDPGTCLAAVTVEPGLPAQRLQEKGGMPCPAL--QVDNVPAPSELLSPARILAFHQEL 257
+P CL+ ++ + L+ + CP+ Q+ P SE L P +L+ Q L
Sbjct: 935 QEPQLCLSCLSQHGSILMSILKH---LLCPSFLNQLRQAPHGSEFL-PVVVLSVCQLL 988
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 35.0 bits (79), Expect = 0.071
Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 13/173 (7%)
Query: 2 LRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQ 61
L+D EA++ E ++ ++ LQ Q++D +Q L+EA ++E+ A+ +E +
Sbjct: 1626 LKDLEAQI--EAANKARDEVIKQLRKLQAQMKD----YQRELEEARASRDEIFAQSKESE 1679
Query: 62 KKQHEAKLAVTPLKAKIASLVRKCRERNRLITHLLQELHRHGLGNLLLSELAQNMLNDVA 121
KK + + L+ ++AS R R + L E+ G L L++
Sbjct: 1680 KKLKSLEAEILQLQEELASSERARRHAEQERDELADEITNSASGKSAL-------LDEKR 1732
Query: 122 LAEYTATFLAPGVPETSHHLDVKSEMTAALRAQTYLLNPEMDSVLQSSLSSES 174
E L + E ++++ ++ Q LN E+ + ++ S++
Sbjct: 1733 RLEARIAQLEEELEEEQSNMELLNDRFRKTTLQVDTLNAELAAERSAAQKSDN 1785
Score = 32.0 bits (71), Expect = 0.61
Identities = 23/106 (21%), Positives = 52/106 (49%), Gaps = 11/106 (10%)
Query: 8 EVTEEDPRLRAQ-----QLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQA------K 56
+VT ++ L+A+ ++ + ++ +L + HQ L+E L E+LQA +
Sbjct: 846 QVTRQEEELQAKDEELLKVKEKQTKVEGELEEMERKHQQLLEEKNILAEQLQAETELFAE 905
Query: 57 LEELQKKQHEAKLAVTPLKAKIASLVRKCRERNRLITHLLQELHRH 102
EE++ + K + + + S V + ERN+++ + +++ H
Sbjct: 906 AEEMRARLAAKKQELEEILHDLESRVEEEEERNQILQNEKKKMQAH 951
>gi|45446749 kinesin family member 5A [Homo sapiens]
Length = 1032
Score = 35.0 bits (79), Expect = 0.071
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 11/75 (14%)
Query: 2 LRDSEAEVTEEDPRLRAQQL--------HHRVLTLQCQLRDQGAAHQASLDEATRLQEEL 53
L+D E + + D +A +L HHR L +LRD+ Q ++DE L ++L
Sbjct: 682 LKDKEPDTQDADEVKKALELQMESHREAHHRQLA---RLRDEINEKQKTIDELKDLNQKL 738
Query: 54 QAKLEELQKKQHEAK 68
Q +LE+LQ + K
Sbjct: 739 QLELEKLQADYEKLK 753
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 35.0 bits (79), Expect = 0.071
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 19/173 (10%)
Query: 9 VTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAK 68
+ E R+ Q+ R L Q Q R++ A Q ++ R QEE + +LEEL++++ E +
Sbjct: 392 LAERQKRIEQQKEQRRRLEEQ-QRREREARRQQEREQRRREQEE-KRRLEELERRRKEEE 449
Query: 69 LAVTPLKAKIASLVRKCRERNRLITHLLQELHRHGLGNLLLSELAQNMLNDVALAEYTAT 128
+ + R+ I L+E RH L L Q +L + A+
Sbjct: 450 -----ERRRAEEEKRRVEREQEYIRRQLEEEQRH------LEVLQQQLLQEQAM------ 492
Query: 129 FLAPGVPETSHHLDVKSEMTAALRAQTYLLNPEMDSVLQSSLSSESWPIPEPE 181
L E H + + Q YLL+ + D S+ P P+ E
Sbjct: 493 LLECRWREMEEHRQAERLQRQLQQEQAYLLSLQHDHRRPHPQHSQQPPPPQQE 545
>gi|149363664 septin 8 isoform d [Homo sapiens]
Length = 369
Score = 35.0 bits (79), Expect = 0.071
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 2 LRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAK----L 57
LR+ V ED R + H+ L +C+L + G + LQE +AK L
Sbjct: 216 LREMLIRVNMEDLREQTHSRHYE-LYRRCKLEEMGFQDSDGDSQPFSLQETYEAKRKEFL 274
Query: 58 EELQKKQHEAK-LAVTPLKAKIASLVRKCRERNRLITHL 95
ELQ+K+ E + + V +K L K RE + HL
Sbjct: 275 SELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 313
>gi|149363638 septin 8 isoform c [Homo sapiens]
Length = 442
Score = 35.0 bits (79), Expect = 0.071
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 2 LRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAK----L 57
LR+ V ED R + H+ L +C+L + G + LQE +AK L
Sbjct: 276 LREMLIRVNMEDLREQTHSRHYE-LYRRCKLEEMGFQDSDGDSQPFSLQETYEAKRKEFL 334
Query: 58 EELQKKQHEAK-LAVTPLKAKIASLVRKCRERNRLITHL 95
ELQ+K+ E + + V +K L K RE + HL
Sbjct: 335 SELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373
>gi|149363689 septin 8 isoform a [Homo sapiens]
Length = 483
Score = 35.0 bits (79), Expect = 0.071
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 2 LRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAK----L 57
LR+ V ED R + H+ L +C+L + G + LQE +AK L
Sbjct: 276 LREMLIRVNMEDLREQTHSRHYE-LYRRCKLEEMGFQDSDGDSQPFSLQETYEAKRKEFL 334
Query: 58 EELQKKQHEAK-LAVTPLKAKIASLVRKCRERNRLITHL 95
ELQ+K+ E + + V +K L K RE + HL
Sbjct: 335 SELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373
>gi|149363661 septin 8 isoform b [Homo sapiens]
Length = 429
Score = 35.0 bits (79), Expect = 0.071
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 6/99 (6%)
Query: 2 LRDSEAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAK----L 57
LR+ V ED R + H+ L +C+L + G + LQE +AK L
Sbjct: 276 LREMLIRVNMEDLREQTHSRHYE-LYRRCKLEEMGFQDSDGDSQPFSLQETYEAKRKEFL 334
Query: 58 EELQKKQHEAK-LAVTPLKAKIASLVRKCRERNRLITHL 95
ELQ+K+ E + + V +K L K RE + HL
Sbjct: 335 SELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373
>gi|24308303 SH3-binding domain protein 5-like [Homo sapiens]
Length = 393
Score = 35.0 bits (79), Expect = 0.071
Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 1 MLRDSEAEVTE-EDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEA---TRLQEELQAK 56
ML + +V E E+ RLR ++ H RV L Q + A Q +L A +R EL+A+
Sbjct: 172 MLNHATCKVNEAEEERLRGEREHQRVTRLCQQAEARVQALQKTLRRAIGKSRPYFELKAQ 231
Query: 57 LEELQKKQHEAKLAVTPLKAKIASLVRKCRERNRLITHLLQELHRHGLGNL 107
++ ++H+AK VT L+ ++A + R + + +++H G L
Sbjct: 232 FSQI-LEEHKAK--VTELEQQVAQAKTRYSVALRNLEQISEQIHARRRGGL 279
>gi|239787092 A20-binding inhibitor of NF-kappaB activation 2
isoform 1 [Homo sapiens]
Length = 429
Score = 34.3 bits (77), Expect = 0.12
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 10/185 (5%)
Query: 21 LHHRVLTLQCQLRDQ--GAAHQASLDEATRLQEELQAKLEELQ----KKQHEAKLAVTPL 74
L +V + QLR Q GAA E RL E L+ K E+Q + QHE + V L
Sbjct: 67 LLEQVARFREQLRRQEGGAAEAQMRQEIERLTERLEEKEREMQQLLSQPQHEREKEVVLL 126
Query: 75 KAKIASLVRKCRERNRLITHLLQELHRHGLGNLLLSELAQNMLNDVALAEYTATFLAPGV 134
+ +A R + L L E H+ + + Q++ + ++ +
Sbjct: 127 RRSMAEGERARAASDVLCRSLANETHQLRRTLTATAHMCQHLAKCLDERQHAQRNVGERS 186
Query: 135 PETSHHLDVKSEMTAA---LRAQTYLLNPEMDSVLQSSLSSESWPIPEPEW-PAQTAQLD 190
P+ S H D + + + L+ + LL ++ V + + + E+ AQL
Sbjct: 187 PDQSEHTDGHTSVQSVIEKLQEENRLLKQKVTHVEDLNAKWQRYNASRDEYVRGLHAQLR 246
Query: 191 SLKLP 195
L++P
Sbjct: 247 GLQIP 251
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 34.3 bits (77), Expect = 0.12
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 22 HHRVLTLQCQLRDQGAA---------HQAS----LDEATR-LQEELQAKLEELQKKQHEA 67
HH L+L C DQ A H+A LD+AT+ +E+LQ LE L++K E
Sbjct: 110 HHEALSLFCY-EDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEI 168
Query: 68 KLAVTPLKAKIASLVRKCRERNRLITHLLQELHR 101
+ + K L R R + I +ELHR
Sbjct: 169 TRCKSSEEKKPGELKRLVESRRQQILREFEELHR 202
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 34.3 bits (77), Expect = 0.12
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 22 HHRVLTLQCQLRDQGAA---------HQAS----LDEATR-LQEELQAKLEELQKKQHEA 67
HH L+L C DQ A H+A LD+AT+ +E+LQ LE L++K E
Sbjct: 110 HHEALSLFCY-EDQEAVCLICAISHTHRAHTVVPLDDATQEYKEKLQKCLEPLEQKLQEI 168
Query: 68 KLAVTPLKAKIASLVRKCRERNRLITHLLQELHR 101
+ + K L R R + I +ELHR
Sbjct: 169 TRCKSSEEKKPGELKRLVESRRQQILREFEELHR 202
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 34.3 bits (77), Expect = 0.12
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 6 EAEVTEEDPRLRAQQLHHRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQH 65
E+ + E+ + +A + H++L + +DQG + ++ E Q K++ELQ+K
Sbjct: 591 ESRLAAEEFKRKATECQHKLL----KAKDQGKPEVGEYAKLEKINAEQQLKIQELQEKLE 646
Query: 66 EAKLAVTPLKAKIASLVRKCRER 88
+A A T ++ +R+ +ER
Sbjct: 647 KAVKASTE-ATELLQNIRQAKER 668
Score = 28.5 bits (62), Expect = 6.7
Identities = 19/80 (23%), Positives = 35/80 (43%)
Query: 23 HRVLTLQCQLRDQGAAHQASLDEATRLQEELQAKLEELQKKQHEAKLAVTPLKAKIASLV 82
+R+L L+ +LR+ H+ E R ELQ L+E + + + A L++++
Sbjct: 849 NRLLELETRLREVSLEHEEQKLELKRQLTELQLSLQERESQLTALQAARAALESQLRQAK 908
Query: 83 RKCRERNRLITHLLQELHRH 102
+ E +Q L H
Sbjct: 909 TELEETTAEAEEEIQALTAH 928
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,833,352
Number of Sequences: 37866
Number of extensions: 507780
Number of successful extensions: 3719
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 212
Number of HSP's that attempted gapping in prelim test: 3176
Number of HSP's gapped (non-prelim): 746
length of query: 276
length of database: 18,247,518
effective HSP length: 101
effective length of query: 175
effective length of database: 14,423,052
effective search space: 2524034100
effective search space used: 2524034100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.