Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 46409266
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|46409266 coiled-coil domain containing 74B [Homo sapiens]
(380 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|46409266 coiled-coil domain containing 74B [Homo sapiens] 759 0.0
gi|20270307 coiled-coil domain containing 74A [Homo sapiens] 736 0.0
gi|13376725 coiled-coil domain containing 92 [Homo sapiens] 43 5e-04
gi|153090207 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090203 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090201 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090191 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090182 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|148540145 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090205 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090199 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090197 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090195 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090187 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|153090185 Golgi-localized syntaphilin-related protein isoform... 42 7e-04
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 42 0.001
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 42 0.001
gi|153090209 Golgi-localized syntaphilin-related protein isoform... 42 0.001
gi|153090193 Golgi-localized syntaphilin-related protein isoform... 42 0.001
gi|153090189 Golgi-localized syntaphilin-related protein isoform... 42 0.001
gi|154800457 centrosomal protein 68kDa [Homo sapiens] 39 0.010
gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens] 38 0.017
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 37 0.023
gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo sapi... 37 0.038
gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo sapi... 37 0.038
gi|145699133 KPL2 protein isoform 1 [Homo sapiens] 36 0.050
gi|239754624 PREDICTED: similar to hCG1998564 [Homo sapiens] 35 0.086
gi|26051278 nuclear pore membrane protein 121 [Homo sapiens] 35 0.086
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 35 0.11
gi|148806928 hypothetical protein LOC57482 [Homo sapiens] 35 0.15
>gi|46409266 coiled-coil domain containing 74B [Homo sapiens]
Length = 380
Score = 759 bits (1960), Expect = 0.0
Identities = 380/380 (100%), Positives = 380/380 (100%)
Query: 1 MSGAGVAAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFL 60
MSGAGVAAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFL
Sbjct: 1 MSGAGVAAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFL 60
Query: 61 QQQHSEMLAKLHEEIEHLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCI 120
QQQHSEMLAKLHEEIEHLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCI
Sbjct: 61 QQQHSEMLAKLHEEIEHLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCI 120
Query: 121 NGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISN 180
NGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISN
Sbjct: 121 NGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISN 180
Query: 181 SGKARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAA 240
SGKARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAA
Sbjct: 181 SGKARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAA 240
Query: 241 CMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQHLKSLL 300
CMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQHLKSLL
Sbjct: 241 CMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQHLKSLL 300
Query: 301 EGSQRPQAVPEEASFPRDQEATHFPKVSTKSLSKKCLLLSPPVAERAILPALKQTPKNNF 360
EGSQRPQAVPEEASFPRDQEATHFPKVSTKSLSKKCLLLSPPVAERAILPALKQTPKNNF
Sbjct: 301 EGSQRPQAVPEEASFPRDQEATHFPKVSTKSLSKKCLLLSPPVAERAILPALKQTPKNNF 360
Query: 361 AERQKRLQAMQKRRLHRSVL 380
AERQKRLQAMQKRRLHRSVL
Sbjct: 361 AERQKRLQAMQKRRLHRSVL 380
>gi|20270307 coiled-coil domain containing 74A [Homo sapiens]
Length = 378
Score = 736 bits (1900), Expect = 0.0
Identities = 371/380 (97%), Positives = 372/380 (97%), Gaps = 2/380 (0%)
Query: 1 MSGAGVAAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFL 60
MSGAGVAAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFL
Sbjct: 1 MSGAGVAAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFL 60
Query: 61 QQQHSEMLAKLHEEIEHLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCI 120
QQQHSEMLAKLHEEIEHLKRENKDL YKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCI
Sbjct: 61 QQQHSEMLAKLHEEIEHLKRENKDLHYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCI 120
Query: 121 NGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISN 180
NGVWVEPGGPSPARLKEGSSRTHRPGGK GRLAGGSADTVRSPADSLS SSFQSVKSISN
Sbjct: 121 NGVWVEPGGPSPARLKEGSSRTHRPGGKRGRLAGGSADTVRSPADSLSMSSFQSVKSISN 180
Query: 181 SGKARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAA 240
SGKARPQPGSFNKQDSKADV QKADLEEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAA
Sbjct: 181 SGKARPQPGSFNKQDSKADVSQKADLEEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAA 240
Query: 241 CMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQHLKSLL 300
CMGNSQHQGRQMGA AHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQEL+HLKSLL
Sbjct: 241 CMGNSQHQGRQMGAGAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELRHLKSLL 300
Query: 301 EGSQRPQAVPEEASFPRDQEATHFPKVSTKSLSKKCLLLSPPVAERAILPALKQTPKNNF 360
EGSQRPQA PEEASFPRDQEATHFPKVSTKSLSKKC LSPPVAERAILPALKQTPKNNF
Sbjct: 301 EGSQRPQAAPEEASFPRDQEATHFPKVSTKSLSKKC--LSPPVAERAILPALKQTPKNNF 358
Query: 361 AERQKRLQAMQKRRLHRSVL 380
AERQKRLQAMQKRRLHRSVL
Sbjct: 359 AERQKRLQAMQKRRLHRSVL 378
>gi|13376725 coiled-coil domain containing 92 [Homo sapiens]
Length = 331
Score = 42.7 bits (99), Expect = 5e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 54 EKSLQFLQQQHSEMLAKLHEEIEHLKRENKDLRYKLIMNQTSQKKDGPS 102
+K+L FLQ++H+ L LH EI L++ DL Y+L + + Q DG S
Sbjct: 31 QKNLLFLQREHASTLKGLHSEIRRLQQHCTDLTYELTVKSSEQTGDGTS 79
>gi|153090207 Golgi-localized syntaphilin-related protein isoform c
[Homo sapiens]
Length = 660
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 113 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 172
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 173 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 230
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 231 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 289
Query: 295 H 295
H
Sbjct: 290 H 290
>gi|153090203 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 115 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 174
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 175 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 232
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 233 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 291
Query: 295 H 295
H
Sbjct: 292 H 292
>gi|153090201 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 115 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 174
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 175 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 232
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 233 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 291
Query: 295 H 295
H
Sbjct: 292 H 292
>gi|153090191 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 115 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 174
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 175 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 232
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 233 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 291
Query: 295 H 295
H
Sbjct: 292 H 292
>gi|153090182 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 115 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 174
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 175 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 232
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 233 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 291
Query: 295 H 295
H
Sbjct: 292 H 292
>gi|148540145 Golgi-localized syntaphilin-related protein isoform b
[Homo sapiens]
Length = 662
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 115 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 174
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 175 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 232
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 233 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 291
Query: 295 H 295
H
Sbjct: 292 H 292
>gi|153090205 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 116 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 175
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 176 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 233
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 234 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 292
Query: 295 H 295
H
Sbjct: 293 H 293
>gi|153090199 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 116 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 175
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 176 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 233
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 234 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 292
Query: 295 H 295
H
Sbjct: 293 H 293
>gi|153090197 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 116 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 175
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 176 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 233
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 234 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 292
Query: 295 H 295
H
Sbjct: 293 H 293
>gi|153090195 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 116 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 175
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 176 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 233
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 234 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 292
Query: 295 H 295
H
Sbjct: 293 H 293
>gi|153090187 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 116 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 175
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 176 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 233
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 234 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 292
Query: 295 H 295
H
Sbjct: 293 H 293
>gi|153090185 Golgi-localized syntaphilin-related protein isoform a
[Homo sapiens]
Length = 663
Score = 42.4 bits (98), Expect = 7e-04
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 7/181 (3%)
Query: 119 CINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSI 178
C G+ E S KE S +PG + + S ++ +P +ST+ + S
Sbjct: 116 CTIGMVGEGSIQSSRYKKESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSS 175
Query: 179 SNSGK-ARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEA 234
N G R S +K S P++ DL +L ++L V P +
Sbjct: 176 RNRGPHGRSNGASSHKPGSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSG 233
Query: 235 SNAGAACMGNSQHQGRQMGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQ 294
S G+ C + GR M + + P P + T L+Q EV +R L T L +++
Sbjct: 234 SYKGSDCSPIMRRSGRYMSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRL 292
Query: 295 H 295
H
Sbjct: 293 H 293
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 42.0 bits (97), Expect = 0.001
Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 32/227 (14%)
Query: 13 PSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDP--QKRNLDLEKSLQFLQQQHSEMLAK 70
P P P + R R R + S R S Q P K + L+ +++HSE +
Sbjct: 364 PPRPWPCALRPRPRLRAALPSRRLFSRGAAQQLPCCYKLHPGRHVPLRPFKEKHSEARRR 423
Query: 71 LHEEIE-HLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCINGVWVEPGG 129
L E + HL+ + + + ++ + GP A GAR EP G
Sbjct: 424 LPEPRQLHLQPVGANSVERAARRRRTRPEPGP---------ARRGAR--------AEPPG 466
Query: 130 P----SPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTS----SFQSVKSISNS 181
P P GSS P G+ GR AGG A RSP D L + S+
Sbjct: 467 PPTLQDPPASHLGSSPAQAPSGEAGRRAGGGAVGARSPGDVLGSGGGLIGSDSLPPADPL 526
Query: 182 GKARPQPG--SFNKQDSKADVPQKADLEEEPLLHNSKLDKVPGVQGQ 226
+ P+PG F S+ D+ + + +P +H + PG QG+
Sbjct: 527 RLSHPEPGVVPFQNLRSQRDL-RNPSHQRKPGVHVTS-SVQPGFQGR 571
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 42.0 bits (97), Expect = 0.001
Identities = 60/227 (26%), Positives = 89/227 (39%), Gaps = 32/227 (14%)
Query: 13 PSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDP--QKRNLDLEKSLQFLQQQHSEMLAK 70
P P P + R R R + S R S Q P K + L+ +++HSE +
Sbjct: 364 PPRPWPCALRPRPRLRAALPSRRLFSRGAAQQLPCCYKLHPGRHVPLRPFKEKHSEARRR 423
Query: 71 LHEEIE-HLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCINGVWVEPGG 129
L E + HL+ + + + ++ + GP A GAR EP G
Sbjct: 424 LPEPRQLHLQPVGANSVERAARRRRTRPEPGP---------ARRGAR--------AEPPG 466
Query: 130 P----SPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTS----SFQSVKSISNS 181
P P GSS P G+ GR AGG A RSP D L + S+
Sbjct: 467 PPTLQDPPASHLGSSPAQAPSGEAGRRAGGGAVGARSPGDVLGSGGGLIGSDSLPPADPL 526
Query: 182 GKARPQPG--SFNKQDSKADVPQKADLEEEPLLHNSKLDKVPGVQGQ 226
+ P+PG F S+ D+ + + +P +H + PG QG+
Sbjct: 527 RLSHPEPGVVPFQNLRSQRDL-RNPSHQRKPGVHVTS-SVQPGFQGR 571
>gi|153090209 Golgi-localized syntaphilin-related protein isoform d
[Homo sapiens]
Length = 544
Score = 41.6 bits (96), Expect = 0.001
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 7/164 (4%)
Query: 136 KEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISNSGK-ARPQPGSFNKQ 194
KE S +PG + + S ++ +P +ST+ + S N G R S +K
Sbjct: 14 KESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSSRNRGPHGRSNGASSHKP 73
Query: 195 DSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEASNAGAACMGNSQHQGRQ 251
S P++ DL +L ++L V P + S G+ C + GR
Sbjct: 74 GSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRY 131
Query: 252 MGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQH 295
M + + P P + T L+Q EV +R L T L +++ H
Sbjct: 132 MSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRLH 174
>gi|153090193 Golgi-localized syntaphilin-related protein isoform d
[Homo sapiens]
Length = 544
Score = 41.6 bits (96), Expect = 0.001
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 7/164 (4%)
Query: 136 KEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISNSGK-ARPQPGSFNKQ 194
KE S +PG + + S ++ +P +ST+ + S N G R S +K
Sbjct: 14 KESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSSRNRGPHGRSNGASSHKP 73
Query: 195 DSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEASNAGAACMGNSQHQGRQ 251
S P++ DL +L ++L V P + S G+ C + GR
Sbjct: 74 GSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRY 131
Query: 252 MGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQH 295
M + + P P + T L+Q EV +R L T L +++ H
Sbjct: 132 MSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRLH 174
>gi|153090189 Golgi-localized syntaphilin-related protein isoform d
[Homo sapiens]
Length = 544
Score = 41.6 bits (96), Expect = 0.001
Identities = 41/164 (25%), Positives = 67/164 (40%), Gaps = 7/164 (4%)
Query: 136 KEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISNSGK-ARPQPGSFNKQ 194
KE S +PG + + S ++ +P +ST+ + S N G R S +K
Sbjct: 14 KESKSGLVKPGSEADFSSSSSTGSISAPEVHMSTAGSKRSSSSRNRGPHGRSNGASSHKP 73
Query: 195 DSKADVPQKADLEEEPLLHNSKLDKV---PGVQGQARKEKAEASNAGAACMGNSQHQGRQ 251
S P++ DL +L ++L V P + S G+ C + GR
Sbjct: 74 GSSPSSPREKDLLS--MLCRNQLSPVNIHPSYAPSSPSSSNSGSYKGSDCSPIMRRSGRY 131
Query: 252 MGAAAHPPMILPLPLRKPTTLRQCEVLIRELWNTNLLQTQELQH 295
M + + P P + T L+Q EV +R L T L +++ H
Sbjct: 132 MSCGENHGVRPPNPEQYLTPLQQKEVTVRHL-KTKLKESERRLH 174
>gi|154800457 centrosomal protein 68kDa [Homo sapiens]
Length = 757
Score = 38.5 bits (88), Expect = 0.010
Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 27/168 (16%)
Query: 114 GARWVCINGVWV--EPGGPSPARLKEGSSRTHRPGGKHGRLA-GGSADTVRSPADSLSTS 170
GA + W+ +PGGPS A + S P + A G D L +
Sbjct: 57 GAEGIPAPTCWIGTDPGGPSRAHQPQASDANREPVAERSEPALSGLPPATMGSGDLLLSG 116
Query: 171 SFQSVKSISNSGKARPQPGSFNK--------------QDSKADVPQKADLEEEPLLHNSK 216
Q K+ +S + PQ S + S AD+PQ DL ++P H+S
Sbjct: 117 ESQVEKTKLSSSEEFPQTLSLPRTTTICSGHDADTEDDPSLADLPQALDLSQQP--HSSG 174
Query: 217 LDKV--------PGVQGQARKEKAEASNAGAACMGNSQHQGRQMGAAA 256
L + PG Q AS+ G++ G+ + + G+ A
Sbjct: 175 LSCLSQWKSVLSPGSAAQPSSCSISASSTGSSLQGHQERAEPRGGSLA 222
>gi|28872798 CCAAT/enhancer binding protein delta [Homo sapiens]
Length = 269
Score = 37.7 bits (86), Expect = 0.017
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 12/80 (15%)
Query: 7 AAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFLQQQHSE 66
+AG R P +P R+RR+R ++ V+ R ++ ++RN ++++ L L ++
Sbjct: 181 SAGKRGPDRGSPEYRQRRERNNIAVRKSRDKA--------KRRNQEMQQKLVELSAENE- 231
Query: 67 MLAKLHEEIEHLKRENKDLR 86
KLH+ +E L R+ LR
Sbjct: 232 ---KLHQRVEQLTRDLAGLR 248
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 37.4 bits (85), Expect = 0.023
Identities = 56/277 (20%), Positives = 94/277 (33%), Gaps = 44/277 (15%)
Query: 5 GVAAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFLQQQH 64
G + PPS+P P Q P V+ +P SD + + EK
Sbjct: 287 GPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEK--------- 337
Query: 65 SEMLAKLHEEIEHLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCINGVW 124
K + K K K +S D S S P G N
Sbjct: 338 -----KPPTKAVVSKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSN--- 389
Query: 125 VEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISNS--- 181
+P + + + ++ +P G +L AD+ S +S S+ ++ K ++ +
Sbjct: 390 -KPAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPK 448
Query: 182 ----------GKARPQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDK---------VPG 222
K PQ +DS +D + EEE S + K P
Sbjct: 449 ATAKAALSLPAKQAPQ----GSRDSSSDSDSSSSEEEEEKTSKSAVKKKPQKVAGGAAPS 504
Query: 223 VQGQARKEKAEASNAGAACMGNSQHQGRQMGAAAHPP 259
A+K KAE+SN+ ++ + + + + G + P
Sbjct: 505 KPASAKKGKAESSNSSSSDDSSEEEEEKLKGKGSPRP 541
>gi|23065526 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 36.6 bits (83), Expect = 0.038
Identities = 59/245 (24%), Positives = 90/245 (36%), Gaps = 29/245 (11%)
Query: 6 VAAGTRP-PSSPTPGSRRRRQRPSVGVQSLR-----PQSPQLRQSD----PQKRNLDLEK 55
V+ T P P+SP PGS RR RP + SLR P++P + P+ R +
Sbjct: 296 VSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDS 355
Query: 56 SLQFLQQQHSEMLAKLHEEIEHLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGA 115
Q + + + +RE R L + + P+ SR G
Sbjct: 356 DSSASSAQSGPLGTRSDDTGTGPRRERPSRR--LTTGTPASPRRPPALRSQSRDRLDRGR 413
Query: 116 RWVCINGVWVEPGGPSPARLKEGSSRTHRP--------GGKH-----GRLAGGSADTVRS 162
G + PSPAR SR + G+H GR +GGS +
Sbjct: 414 PRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQ 473
Query: 163 PADSLSTSSFQSVKSISNSGKARPQPGSFNKQDSKADVPQKAD----LEEEPLLHNSKLD 218
+ S ++ + + S S + P S + + D Q+ LEEE L + L+
Sbjct: 474 TPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALE 533
Query: 219 KVPGV 223
V V
Sbjct: 534 AVASV 538
>gi|19923777 growth arrest-specific 2 like 1 isoform a [Homo
sapiens]
Length = 681
Score = 36.6 bits (83), Expect = 0.038
Identities = 59/245 (24%), Positives = 90/245 (36%), Gaps = 29/245 (11%)
Query: 6 VAAGTRP-PSSPTPGSRRRRQRPSVGVQSLR-----PQSPQLRQSD----PQKRNLDLEK 55
V+ T P P+SP PGS RR RP + SLR P++P + P+ R +
Sbjct: 296 VSPTTSPRPASPVPGSERRGSRPEMTPVSLRSTKEGPETPPRPRDQLPPHPRSRRYSGDS 355
Query: 56 SLQFLQQQHSEMLAKLHEEIEHLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGA 115
Q + + + +RE R L + + P+ SR G
Sbjct: 356 DSSASSAQSGPLGTRSDDTGTGPRRERPSRR--LTTGTPASPRRPPALRSQSRDRLDRGR 413
Query: 116 RWVCINGVWVEPGGPSPARLKEGSSRTHRP--------GGKH-----GRLAGGSADTVRS 162
G + PSPAR SR + G+H GR +GGS +
Sbjct: 414 PRGAPGGRGAQLSVPSPARRARSQSREEQAVLLVRRDRDGQHSWVPRGRGSGGSGRSTPQ 473
Query: 163 PADSLSTSSFQSVKSISNSGKARPQPGSFNKQDSKADVPQKAD----LEEEPLLHNSKLD 218
+ S ++ + + S S + P S + + D Q+ LEEE L + L+
Sbjct: 474 TPRARSPAAPRLSRVSSPSPELGTTPASIFRTPLQLDPQQEQQLFRRLEEEFLANARALE 533
Query: 219 KVPGV 223
V V
Sbjct: 534 AVASV 538
>gi|145699133 KPL2 protein isoform 1 [Homo sapiens]
Length = 1822
Score = 36.2 bits (82), Expect = 0.050
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 10/99 (10%)
Query: 136 KEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISNSGKARPQPGSFNKQD 195
K+G + R G G+ +GG +SPADS TS V P+PGS
Sbjct: 962 KKGETALKRKGSPKGKSSGGKVPVKKSPADSTDTSPVAIVPQ-------PPKPGSEEWVY 1014
Query: 196 SKADVPQKADLEEEP---LLHNSKLDKVPGVQGQARKEK 231
VP++ L P L+ NS ++ + V R+++
Sbjct: 1015 VNEPVPEEMPLFLVPYWELIENSYINTIKTVLRHLREDQ 1053
>gi|239754624 PREDICTED: similar to hCG1998564 [Homo sapiens]
Length = 526
Score = 35.4 bits (80), Expect = 0.086
Identities = 61/256 (23%), Positives = 92/256 (35%), Gaps = 37/256 (14%)
Query: 22 RRRQRPSVGVQSLRP--QSPQLRQSDPQKRNLDLEKSLQFLQQQHSEMLAKLHEEIEHLK 79
RR R ++ Q + SP DP + E L L+++ + + ++I
Sbjct: 143 RRFSRSAIPEQIISSTLSSPSSNAPDPCAK----ETVLSALKEKEKKRTVEEEDQIFLDG 198
Query: 80 RENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCINGVWVEPGGPSPARLKEG- 138
+ENK R+ D H A PL A V + V P P LK G
Sbjct: 199 QENKRRRH-----------DSSGSGH--SAFEPLVANGVPASFV------PKPGSLKRGL 239
Query: 139 ---SSRTH----RPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISNSGKAR-PQPGS 190
SS H L G A + S + + TSS+ S + IS K P
Sbjct: 240 NSQSSDDHLNKRSRSSSMSSLTGAYASGIPSSSRNAITSSYSSTRGISQLWKRNGPSSSP 299
Query: 191 FNKQ-DSKADVPQKA--DLEEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAACMGNSQH 247
F+ S++ P++ + EE L H+S +++ EKA + NSQ
Sbjct: 300 FSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADRESQGEKAADTTPRKKQNSNSQS 359
Query: 248 QGRQMGAAAHPPMILP 263
G +LP
Sbjct: 360 TPGSSGQRKRKVQLLP 375
>gi|26051278 nuclear pore membrane protein 121 [Homo sapiens]
Length = 984
Score = 35.4 bits (80), Expect = 0.086
Identities = 61/256 (23%), Positives = 92/256 (35%), Gaps = 37/256 (14%)
Query: 22 RRRQRPSVGVQSLRP--QSPQLRQSDPQKRNLDLEKSLQFLQQQHSEMLAKLHEEIEHLK 79
RR R ++ Q + SP DP + E L L+++ + + ++I
Sbjct: 15 RRFSRSAIPEQIISSTLSSPSSNAPDPCAK----ETVLSALKEKEKKRTVEEEDQIFLDG 70
Query: 80 RENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARWVCINGVWVEPGGPSPARLKEG- 138
+ENK R+ D H A PL A V + V P P LK G
Sbjct: 71 QENKRRRH-----------DSSGSGH--SAFEPLVANGVPASFV------PKPGSLKRGL 111
Query: 139 ---SSRTH----RPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISNSGKAR-PQPGS 190
SS H L G A + S + + TSS+ S + IS K P
Sbjct: 112 NSQSSDDHLNKRSRSSSMSSLTGAYASGIPSSSRNAITSSYSSTRGISQLWKRNGPSSSP 171
Query: 191 FNKQ-DSKADVPQKA--DLEEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAACMGNSQH 247
F+ S++ P++ + EE L H+S +++ EKA + NSQ
Sbjct: 172 FSSPASSRSQTPERPAKKIREEELCHHSSSSTPLAADRESQGEKAADTTPRKKQNSNSQS 231
Query: 248 QGRQMGAAAHPPMILP 263
G +LP
Sbjct: 232 TPGSSGQRKRKVQLLP 247
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 35.0 bits (79), Expect = 0.11
Identities = 37/134 (27%), Positives = 56/134 (41%), Gaps = 15/134 (11%)
Query: 126 EPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKSISNSGKAR 185
+PG P AR KE +RT + L+G + + S + S S S SV S+S+ A
Sbjct: 661 KPGDPREARRKERPARTPP---RRRTLSGSGSGSGSSYSGSSSRSRSLSVSSVSSVSSAT 717
Query: 186 PQPGSFNKQDSKADVPQKADLEEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAACMGNS 245
S + DS+ ADL P+ S P Q RKEK ++
Sbjct: 718 SSSSSAHSVDSE---DMYADL-ASPVSSASSRSPAP---AQTRKEKGKSKKEDGV----- 765
Query: 246 QHQGRQMGAAAHPP 259
+ + R+ ++ PP
Sbjct: 766 KEEKRKRDSSTQPP 779
>gi|148806928 hypothetical protein LOC57482 [Homo sapiens]
Length = 1233
Score = 34.7 bits (78), Expect = 0.15
Identities = 47/213 (22%), Positives = 73/213 (34%), Gaps = 27/213 (12%)
Query: 11 RPPSSPTP----GSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFLQQQHSE 66
RPPS P P G +R + + + P P +Q P + K LQ +HS
Sbjct: 1014 RPPSPPGPEERKGQKRDEEEEATERKPASPPLPATQQEKPSQTPEAGRKEKPMLQSRHSL 1073
Query: 67 MLAKLHEEIE---------HLKRENKDLRYKLIMNQTSQKKDGPSGNHLSRASAPLGARW 117
+KL E++E L+++ + + Q ++ LS+ +
Sbjct: 1074 DGSKLTEKVETAQPLWITLALQKQKGFREQQATREERKQAREAKQAEKLSKENV------ 1127
Query: 118 VCINGVWVEPGGPSPARLKEGSSRTHRPGGKHGRLAGGSADTVRSPADSLSTSSFQSVKS 177
V V+PG S +R T P K A + R +T
Sbjct: 1128 ----SVSVQPGSSSVSRAGSLHKSTALPEEKRPETAVSRLER-REQLKKANTLPTSVTVE 1182
Query: 178 ISNSGKARPQPGSFNKQDSKADVPQKADLEEEP 210
IS+S P K+ S P A + EP
Sbjct: 1183 ISDSAPPAPLVKEVTKRFS---TPDAAPVSTEP 1212
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,320,372
Number of Sequences: 37866
Number of extensions: 914638
Number of successful extensions: 4599
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 184
Number of HSP's that attempted gapping in prelim test: 4392
Number of HSP's gapped (non-prelim): 391
length of query: 380
length of database: 18,247,518
effective HSP length: 104
effective length of query: 276
effective length of database: 14,309,454
effective search space: 3949409304
effective search space used: 3949409304
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.