Guide to the Human Genome
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Name: CCDC74A Sequence: fasta or formatted (378aa) NCBI GI: 20270307
Description:

coiled-coil domain containing 74A

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         31           2
 C cysteine            1.1          4           1
 D aspartate           2.9         11           1
 E glutamate           5.8         22           3
 F phenylalanine       1.6          6           1
 G glycine             7.1         27           2
 H histidine           3.2         12           1
 I isoleucine          1.9          7           1
 K lysine              7.7         29           2
 L leucine            10.3         39           2
 M methionine          2.1          8           1
 N asparagine          3.7         14           2
 P proline             8.5         32           2
 Q glutamine           8.2         31           3
 R arginine            8.7         33           4
 S serine             10.8         41           2
 T threonine           3.2         12           2
 V valine              4.0         15           1
 W tryptophan          0.8          3           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 74A 
CCDC74B               0.973   coiled-coil domain containing 74B 
LOC100290274          0.023   PREDICTED: hypothetical protein XP_002346984 
LOC100288645          0.023   PREDICTED: hypothetical protein XP_002342846 
CCDC92                0.023   coiled-coil domain containing 92 
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.021   Golgi-localized syntaphilin-related protein isoform...
NOLC1                 0.019   nucleolar and coiled-body phosphoprotein 1 
GOLSYN                0.019   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.019   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.019   Golgi-localized syntaphilin-related protein isoform...
MARK4                 0.016   MAP/microtubule affinity-regulating kinase 4 
ZC3H18                0.016   zinc finger CCCH-type containing 18 
FOXP2                 0.016   forkhead box P2 isoform I 
SNIP                  0.016   SNAP25-interacting protein 
CEBPD                 0.015   CCAAT/enhancer binding protein delta 
CEP68                 0.014   centrosomal protein 68kDa 
MDC1                  0.014   mediator of DNA-damage checkpoint 1 
GAS2L1                0.014   growth arrest-specific 2 like 1 isoform a 
GAS2L1                0.014   growth arrest-specific 2 like 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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