Guide to the Human Genome
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Name: CCDC74B Sequence: fasta or formatted (380aa) NCBI GI: 46409266
Description:

coiled-coil domain containing 74B

Referenced in:

Coiled-Coil Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         31           3
 C cysteine            1.1          4           1
 D aspartate           2.9         11           1
 E glutamate           5.8         22           3
 F phenylalanine       1.6          6           1
 G glycine             6.8         26           2
 H histidine           3.2         12           1
 I isoleucine          1.8          7           1
 K lysine              7.6         29           2
 L leucine            10.8         41           3
 M methionine          1.8          7           1
 N asparagine          3.7         14           2
 P proline             8.7         33           2
 Q glutamine           8.4         32           3
 R arginine            8.4         32           4
 S serine             10.5         40           2
 T threonine           3.4         13           2
 V valine              4.2         16           1
 W tryptophan          0.8          3           1
 Y tyrosine            0.3          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   coiled-coil domain containing 74B 
CCDC74A               0.969   coiled-coil domain containing 74A 
CCDC92                0.025   coiled-coil domain containing 92 
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
LOC100290274          0.023   PREDICTED: hypothetical protein XP_002346984 
LOC100288645          0.023   PREDICTED: hypothetical protein XP_002342846 
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.023   Golgi-localized syntaphilin-related protein isoform...
CEP68                 0.019   centrosomal protein 68kDa 
CEBPD                 0.018   CCAAT/enhancer binding protein delta 
NOLC1                 0.016   nucleolar and coiled-body phosphoprotein 1 
GAS2L1                0.016   growth arrest-specific 2 like 1 isoform a 
GAS2L1                0.016   growth arrest-specific 2 like 1 isoform a 
SPEF2                 0.015   KPL2 protein isoform 1 
LOC100292653          0.014   PREDICTED: similar to hCG1998564 
POM121                0.014   nuclear pore membrane protein 121 
ZC3H18                0.014   zinc finger CCCH-type containing 18 
KIAA1211              0.014   hypothetical protein LOC57482 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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