Guide to the Human Genome
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Name: NOL12 Sequence: fasta or formatted (213aa) NCBI GI: 13236553
Description:

nucleolar protein 12

Referenced in:

Nucleus and Nucleolus

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.5         16           2
 C cysteine            0.0          0           0
 D aspartate           5.6         12           2
 E glutamate          11.3         24           3
 F phenylalanine       0.9          2           1
 G glycine             4.7         10           2
 H histidine           3.8          8           1
 I isoleucine          1.9          4           1
 K lysine             11.7         25           4
 L leucine             9.9         21           2
 M methionine          0.9          2           1
 N asparagine          0.9          2           1
 P proline             5.2         11           2
 Q glutamine           3.3          7           1
 R arginine           14.1         30           3
 S serine              7.5         16           2
 T threonine           6.1         13           2
 V valine              3.3          7           1
 W tryptophan          0.0          0           0
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   nucleolar protein 12 
TCHH                  0.051   trichohyalin 
LOC100133599          0.041   PREDICTED: hypothetical protein 
MAP7D2                0.041   MAP7 domain containing 2 
PLEC1                 0.038   plectin 1 isoform 11 
PLEC1                 0.038   plectin 1 isoform 10 
PLEC1                 0.038   plectin 1 isoform 8 
PLEC1                 0.038   plectin 1 isoform 7 
PLEC1                 0.038   plectin 1 isoform 6 
PLEC1                 0.038   plectin 1 isoform 3 
PLEC1                 0.038   plectin 1 isoform 2 
PLEC1                 0.038   plectin 1 isoform 1 
BAZ1A                 0.038   bromodomain adjacent to zinc finger domain, 1A isofo...
BAZ1A                 0.038   bromodomain adjacent to zinc finger domain, 1A isofo...
GOLGA8E               0.038   golgi autoantigen, golgin subfamily a, 8E 
INCENP                0.038   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.038   inner centromere protein antigens 135/155kDa isofor...
AKAP9                 0.035   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.035   A-kinase anchor protein 9 isoform 3 
CEP164                0.035   centrosomal protein 164kDa 
XRRA1                 0.035   X-ray radiation resistance associated 1 
LOC100294088          0.035   PREDICTED: hypothetical protein, partial 
SRRM2                 0.035   splicing coactivator subunit SRm300 
SEPT8                 0.035   septin 8 isoform d 
SEPT8                 0.035   septin 8 isoform c 
SEPT8                 0.035   septin 8 isoform a 
SEPT8                 0.035   septin 8 isoform b 
UPF2                  0.035   UPF2 regulator of nonsense transcripts homolog [Homo...
UPF2                  0.035   UPF2 regulator of nonsense transcripts homolog [Homo...
RDX                   0.033   radixin 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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