Guide to the Human Genome
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Name: GPR143 Sequence: fasta or formatted (424aa) NCBI GI: 4557807
Description:

G protein-coupled receptor 143

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.9         42           4
 C cysteine            3.1         13           2
 D aspartate           2.6         11           1
 E glutamate           4.0         17           1
 F phenylalanine       3.8         16           2
 G glycine             8.5         36           2
 H histidine           2.1          9           1
 I isoleucine          5.4         23           2
 K lysine              2.1          9           1
 L leucine            13.0         55           3
 M methionine          3.3         14           1
 N asparagine          2.6         11           1
 P proline             6.8         29           2
 Q glutamine           3.3         14           1
 R arginine            5.4         23           2
 S serine              8.0         34           1
 T threonine           6.1         26           2
 V valine              5.0         21           1
 W tryptophan          2.4         10           2
 Y tyrosine            2.6         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 143 
VIPR2                 0.020   vasoactive intestinal peptide receptor 2 
RIMS2                 0.017   regulating synaptic membrane exocytosis 2 isoform a...
RIMS2                 0.017   regulating synaptic membrane exocytosis 2 isoform b...
RIMS1                 0.011   regulating synaptic membrane exocytosis 1 
LOC100132891          0.010   PREDICTED: hypothetical protein 
LOC100132891          0.010   PREDICTED: hypothetical protein 
LOC100132891          0.010   PREDICTED: hypothetical protein 
EMR1                  0.010   egf-like module containing, mucin-like, hormone rece...
WBP2NL                0.008   WBP2 N-terminal like 
PHC1                  0.008   polyhomeotic 1-like 
EMR3                  0.008   egf-like module-containing mucin-like receptor 3 [H...
NFATC4                0.007   nuclear factor of activated T-cells, cytoplasmic, c...
NFATC4                0.007   nuclear factor of activated T-cells, cytoplasmic, ca...
ATP6V0E2              0.007   ATPase, H+ transporting, V0 subunit isoform 2 [Homo...
ATP6V0E2              0.007   ATPase, H+ transporting, V0 subunit isoform 1 [Homo...
BDKRB2                0.006   bradykinin receptor B2 
ATXN2                 0.006   ataxin 2 
LOC100292600          0.006   PREDICTED: hypothetical protein 
LOC100290191          0.006   PREDICTED: hypothetical protein XP_002346744 
LOC100289641          0.006   PREDICTED: hypothetical protein XP_002342602 
PI4KB                 0.006   catalytic phosphatidylinositol 4-kinase beta 
PTPN23                0.006   protein tyrosine phosphatase, non-receptor type 23 [...
GPR157                0.006   G protein-coupled receptor 157 
ABCC12                0.006   ATP-binding cassette protein C12 
OR2T33                0.006   olfactory receptor, family 2, subfamily T, member 33...
DPCR1                 0.005   diffuse panbronchiolitis critical region 1 protein ...
FAM189B               0.005   hypothetical protein LOC10712 isoform b 
FAM189B               0.005   hypothetical protein LOC10712 isoform a 
LOC100129566          0.005   PREDICTED: hypothetical protein LOC100129566 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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