Guide to the Human Genome
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Name: WBP2NL Sequence: fasta or formatted (309aa) NCBI GI: 224593260
Description:

WBP2 N-terminal like

Referenced in:

WW Domain

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.3         38           3
 C cysteine            1.0          3           1
 D aspartate           1.3          4           1
 E glutamate           4.2         13           1
 F phenylalanine       4.2         13           1
 G glycine            13.6         42           2
 H histidine           0.6          2           1
 I isoleucine          3.2         10           1
 K lysine              1.6          5           1
 L leucine             6.1         19           2
 M methionine          2.9          9           2
 N asparagine          4.2         13           1
 P proline            13.3         41           3
 Q glutamine           3.6         11           1
 R arginine            4.2         13           2
 S serine              8.4         26           3
 T threonine           4.5         14           1
 V valine              4.9         15           1
 W tryptophan          0.6          2           1
 Y tyrosine            5.2         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   WBP2 N-terminal like 
WBP2                  0.187   WW domain binding protein 2 
DAZAP1                0.065   DAZ associated protein 1 isoform a 
DAZAP1                0.065   DAZ associated protein 1 isoform b 
FIGNL2                0.058   fidgetin-like 2 
SNRPB                 0.057   small nuclear ribonucleoprotein polypeptide B/B' iso...
RBM12                 0.055   RNA binding motif protein 12 
RBM12                 0.055   RNA binding motif protein 12 
SNRPB                 0.052   small nuclear ribonucleoprotein polypeptide B/B' isof...
NACA                  0.052   nascent polypeptide-associated complex alpha subuni...
MAPK1IP1L             0.052   MAPK-interacting and spindle-stabilizing protein [Ho...
CPSF6                 0.050   cleavage and polyadenylation specific factor 6, 68 ...
PRB2                  0.049   proline-rich protein BstNI subfamily 2 
ELN                   0.047   elastin isoform d precursor 
ELN                   0.047   elastin isoform c precursor 
ANXA11                0.047   annexin A11 
ANXA11                0.047   annexin A11 
ANXA11                0.047   annexin A11 
WAS                   0.045   Wiskott-Aldrich syndrome protein 
RBM14                 0.045   RNA binding motif protein 14 
CEL                   0.044   carboxyl ester lipase precursor 
ANXA7                 0.044   annexin VII isoform 2 
ANXA7                 0.044   annexin VII isoform 1 
YLPM1                 0.044   YLP motif containing 1 
PRB1                  0.042   proline-rich protein BstNI subfamily 1 isoform 1 pre...
SNRPN                 0.041   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.041   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.041   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.041   small nuclear ribonucleoprotein polypeptide N 
SNRPN                 0.041   small nuclear ribonucleoprotein polypeptide N 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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